G49


Basic Information

Item Value
gene id G49
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 369028 ~ 369297 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU99
tgggatggatccctacagagatagaccttttagttaaagagtaagatccttttagtttaacatgaaacggccccgaaatcaccatcaccaaactccaccagactccatgtaaataatcaggacttttagtgtgtatagagccagcatatctccaccagactccatgttaataatcaggacgtttagcgtgtatagagccagcatatctccaccagactccatgtaaataatcaggacttttagtgtgtatagagccagcatatctccaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99 True 270 lncRNA 0.46 1 369028 369297

Neighbor

gene id symbol gene type direction distance location
rbm34 LOC103399136,LOC103383372 coding downstream 60895 430192 ~ 439191 (+)
LOC120560448 NA coding downstream 82679 451976 ~ 453564 (+)
LOC120566701 NA coding downstream 89081 458378 ~ 462863 (+)
LOC120566520 NA coding downstream 101448 470745 ~ 473664 (+)
LOC120566531 NA coding downstream 117315 486612 ~ 494282 (+)
G48 NA non-coding upstream 23121 345628 ~ 345907 (+)
G36 NA non-coding upstream 54999 313130 ~ 314029 (+)
G2 NA non-coding upstream 59935 229364 ~ 309093 (+)
G8 NA non-coding upstream 91560 266154 ~ 277468 (+)
G40 NA non-coding upstream 93899 273615 ~ 275129 (+)
G50 LOC104942424 non-coding downstream 1354 370651 ~ 386648 (+)
G55 NA non-coding downstream 40444 409741 ~ 410462 (+)
G221 NA non-coding downstream 153235 522532 ~ 522989 (+)
G261 NA non-coding downstream 317148 686445 ~ 692229 (+)
G270 LOC103372508 non-coding downstream 439264 808561 ~ 811947 (+)
rrp36 rrp36 other upstream 48249 291233 ~ 320779 (+)
fbxo3 NA other upstream 131289 70004 ~ 237739 (+)
LOC120560073 LOC103372506,LOC102203670,LOC101482513,LOC102296948 other upstream 144432 200413 ~ 224596 (+)
LOC120560058 NA other upstream 186725 158391 ~ 182303 (+)
G11 NA other upstream 295359 23490 ~ 73669 (+)
G184 NA other downstream 108674 477971 ~ 481890 (+)
G176 LOC104946033 other downstream 214093 583390 ~ 598207 (+)
LOC120566394 NA other downstream 338856 708153 ~ 753762 (+)
LOC120566368 NA other downstream 538543 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other downstream 557009 926306 ~ 1011615 (+)

Expression


Co-expression Network