LOC120546964


Basic Information

Item Value
gene id LOC120546964
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 23420280 ~ 23431271 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782309.1
GAGTTACATGAACGTACCAACTCCTTACAAAGAGCAATCTTTGAGAGATTAAATCTGACTTCATGCAAAGATGTTGACAGCAAGTGCACAAATcCCATCCATATCAGCCTTAAAACCCACTCAGCTGGCATGAAAGTATTAAAGATGACTGGGATCCAGTACCTGGCATGTCTGTGGACTCTGTTCATCACACAGACTGGATTTGTGTGCAGTGACATTCAGTTCTTGGAGAGGCATGAGGGGGGATCTGTGGTTCTTCCCTGTGTAGTTGACCAAAGAAACCCTTCGCCCTTCGGTGTCTACCTGATGCGCAACTGGCTGAAACCCACGAGTGAAGTGCTGTTCATGCACACCGGGAACGACGTCAGTGCAGATAACCGCATCAGTGTCAGTGGAGACCCGAGCAGCCATTCTCTGAACGTGACCATCTCTCAGCTGAGTGCCAGCGACACAGACCGCTACTACTGTGAGTTTCTGGCGAACAACCCTTTAGGTGAAGACGACCGAATACGGGGGAAGACAGAATTCTTCCTTCTTGTTAATGATGATGCCCTTGGGCCAGTGGACATTGGGTTGGTGGAGACATGTTCTGGGGGCTCAGCCGTGCTCCCTTGCCTCCCCCCACACGGGGGGGCCTTGGCCGTGGAAGGGGTGAGTCTGAAGCGACAGAGGGGCCAGGCACCTGTGGAGGTGCTGTACCACTCAAAGCGTCACCACGGCGGCAGCCCTCCATCCTCCTCCCTGTTCCCCGTCGAGAGGGTCCACCTGTCCTCGGCTCCCGGTCCCAGGGGCATCGCCTACAACCTGAccctgcagcagctgcagccggACGACAGCGGCCTGTACAGTTGCCAGCTGCTCCTCAGTGGCGGGCCCGACACCAGCACCACACTAGGAAGACAAGCACTCTTTGTTTCTGTGCAAGGAGGTCAGTGCGGCTGCTCCAGCTACTCCACTCTGCTATATGCTTTGTCCTCAGCTGTGGtcgttctcctcctcctcatccttgGATTTGTGGTGATTTATAAAGGCAAAGCAAGCCGCAGCGTCAAGTCACACCCTCAGGCACCCATTTACGAGGAGATGACCGGGTTGCAGCCTGTCAGTCGAAAACTGGCCCCCCGCCATCTGGAGGAAACTGAGTCTTCCGAGTACAGAAACTGCTCCGTGAAGAGATCCGGTACTGAAAACCATTACGAAAGCCCCATTGGGGCCCTGAGCCCCAGGAGTGAGTCTTGAAATGAAATATTAGACCTTGTCACCAGCATCAGGAACTAGACTAACTCATCAACTCGGCTGCCTGAAACTCACTGAATTCCAATTAGCACTCTGAAGTTTCTCTAACAGATTTTAACAGACACGTTCACGCGTTTTGGTAACAAAGTTATGTCACTGTTTATAATATTGTTAATGGACATTTCACTGTTTCTCACCAAGTATAACAAACATGTTGTAAgcatttccttcctcataaaaTATTTCTTGAAGTTATCGCCACTAACAGTCAATCAGCAGAATAGTGTAAAGAAGTCGGCACCAGGTCACATGCATTAGTGTCATGCTTGTAGGCTACACAAGAATCTAACGAAATGGGTAcccatttttaaaaatgttgctcCACAGTGCtacactttttgttaaaaatTGTAATGCATTGAGAAGTTAATAAAAACGTTAAAAAATAA

Function

GO: NA

KEGG:

id description
ko04662 B cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782309.1 True 1685 mRNA 0.50 8 23420280 23431271

Neighbor

gene id symbol gene type direction distance location
LOC120561952 NA coding downstream 246663 23170807 ~ 23173617 (-)
mchr1a LOC103354888,LOC104947992,LOC102295449,LOC102791021 coding downstream 422300 22993868 ~ 22997980 (-)
stx8 stx8 coding downstream 585816 22785495 ~ 22834464 (-)
pik3r5 pik3r5 coding downstream 699465 22692787 ~ 22720815 (-)
LOC120558762 LOC108242699,LOC106536899,LOC103354898,LOC100703987,LOC103383580 coding downstream 755067 22654181 ~ 22665213 (-)
rhbdl3 rhbdl3,LOC102785192 coding upstream 7560 23438831 ~ 23501859 (-)
rhot1b LOC103373013,LOC101484650,LOC100702459,LOC102784702,LOC102202739 coding upstream 77514 23508785 ~ 23524162 (-)
LOC120562252 adap2,LOC102784227 coding upstream 94061 23525332 ~ 23532042 (-)
atad5b NA coding upstream 104311 23535582 ~ 23541961 (-)
suz12b suz12 coding upstream 112196 23543467 ~ 23556250 (-)
G6986 NA non-coding downstream 11078 23408277 ~ 23409202 (-)
G6947 LOC104947985,LOC103354881 non-coding downstream 166404 23250195 ~ 23253876 (-)
LOC120556418 NA non-coding downstream 284505 23130454 ~ 23135775 (-)
G6907 LOC107382332,LOC106515271,LOC102218172,LOC108242722,LOC103383557 non-coding downstream 362130 23053319 ~ 23058150 (-)
G6880 usp43 non-coding downstream 446954 22972882 ~ 22973326 (-)
G6995 NA non-coding upstream 77003 23508274 ~ 23508560 (-)
LOC120555765 NA non-coding upstream 135489 23566760 ~ 23571034 (-)
G7067 NA non-coding upstream 145657 23576928 ~ 23577129 (-)
G7069 NA non-coding upstream 152929 23584200 ~ 23584522 (-)
LOC120556236 NA non-coding upstream 506138 23937409 ~ 23943573 (-)
G6943 NA other downstream 177990 23213856 ~ 23242290 (-)
G6924 NA other downstream 255343 23088500 ~ 23164937 (-)
G6881 usp43,LOC104947996 other downstream 431780 22981925 ~ 22988500 (-)
LOC120565362 pik3r6 other downstream 727947 22665375 ~ 22692333 (-)
LOC120556502 LOC104944681,LOC103364456 other downstream 1084697 22328519 ~ 22335583 (-)
G7065 NA other upstream 141434 23572705 ~ 23573049 (-)
LOC120557242 NA other upstream 280556 23711827 ~ 23720750 (-)
si:ch211-207j7.2 NA other upstream 303093 23734364 ~ 23746031 (-)
G7071 NA other upstream 320755 23752026 ~ 23768841 (-)
palm3 NA other upstream 341585 23772856 ~ 23811021 (-)

Expression


Co-expression Network