LOC120547284 (dctn6,LOC102799503)


Basic Information

Item Value
gene id LOC120547284
gene name dctn6,LOC102799503
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 25476830 ~ 25479710 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783113.1
TCTGACAACTGACGCATGCGCATACGCATACGCTTTGATAACAAGGACTCTAAATCGATAATCGAGTGAATTAACGGCACCTCCCACTGGAGTTAATCTATCACAATGGCAGATAAACAAAATAATCAGAAAAGTGTCAAAATAGCCGCTGGAGCCGTAGTTTGCGTTGAAAGTGAAATAAGAGGAGATGTCACTATAGGCTCCAGGACAGTAGTCCACCCTAAAGCTCGTATCATTGCAGAGGCAGGACCCATCGTGATTGGAGAGGGCAATTTGATCGAGGAGCAAGCTCTGATTATTAATGGTTATCCTGAAAACATCACACCAGAGTCTGAAGTGGAACCAAAGACAATGACCATTGGCATGAACAATGTATTTGAAGTTGGCTGTGTATCACAAGCCCTGAAAATCGGGGACAACAACGTGATTGAATCCAAAGCTGACGTCGGTAGGAATGTGATCCTCACCAGTGGCTGTATTATTGGAGCCTTCTGTCAGGTCAACACTTGCGAAGTCATACCTGAGAACACGGTCATCTATGGCTCTGGATGTATGAGGCGGGTTCAGACCGAGAGACCACAGCCCCAGACTCTTCAGCTCGACTTCCTGATGAAGATTTTGCCAAACTACCaccatttgaaaaaaactgttaaagCTGGCCACAATGCTAGCTAAAATGTACCTTCATACTTTTTAAGTTGAATTGTAAACAGCTAGCAAAACTCATATTTAAATAGATCTTTCTGGAAGGAGCATGAATGTATAAAATTATAGAATATGTACCTAGCTTCAGCAGTACTCTCTCTCTTATTGATACATATTTTCTACTCTCAGCTGATAAAGATGTCTTTATCTTGCTGTGCTATTCCCTTTtctataataaattaaataactTCTAAAATGC

Function

symbol description
dctn6 Predicted to enable dynein complex binding activity. Predicted to be involved in mitotic spindle organization. Located in centrosome.

NR:

description
PREDICTED: dynactin subunit 6 isoform X1

GO: NA

KEGG:

id description
K10428 DCTN6; dynactin 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783113.1 True 904 mRNA 0.41 7 25476830 25479710

Neighbor

gene id symbol gene type direction distance location
smim18 smim18 coding downstream 6140 25467097 ~ 25470690 (-)
si:dkey-92j12.5 LOC104962067,LOC103353171 coding downstream 178270 25258657 ~ 25298560 (-)
ptprdb LOC103353169,LOC102314524,LOC102204731 coding downstream 305768 24994114 ~ 25171062 (-)
ecpas kiaa0368 coding downstream 518562 24932476 ~ 24958268 (-)
clockb LOC108241552,LOC100703460,LOC102293337 coding downstream 562772 24882098 ~ 24914058 (-)
LOC120568337 NA coding upstream 32879 25512589 ~ 25529402 (-)
LOC120568214 NA coding upstream 97069 25576779 ~ 25581678 (-)
crmp1 LOC103353182,LOC102796940,LOC104957015,LOC102288736 coding upstream 317489 25797199 ~ 25808606 (-)
ppp2r2ca LOC103383728,LOC103353185,LOC100709897,LOC104957013,LOC101464647 coding upstream 341344 25821054 ~ 25829233 (-)
camk2d2 camk2d,LOC100698346,LOC102204310,LOC106958643,LOC103469495,LOC103354871,LOC108246882,LOC107382167,LOC106904815,LOC101466566,LOC103383722,LOC102794776 coding upstream 482017 25961727 ~ 26000026 (-)
G7506 LOC103353170,LOC104960336 non-coding downstream 222611 25253306 ~ 25254219 (-)
G7388 NA non-coding downstream 664746 24811462 ~ 24812084 (-)
G7383 pde6h,LOC101074909,LOC103354149,LOC106533555 non-coding downstream 713140 24761914 ~ 24763690 (-)
G7352 grin2b,LOC106927073,LOC103137761 non-coding downstream 824609 24651943 ~ 24652221 (-)
G7351 LOC106952308,LOC103137761,LOC106515218,LOC103468798,LOC106927073 non-coding downstream 833727 24642823 ~ 24643103 (-)
LOC120568431 NA non-coding upstream 45145 25524855 ~ 25525679 (-)
LOC120568384 NA non-coding upstream 66425 25546135 ~ 25549752 (-)
G7577 NA non-coding upstream 118988 25598698 ~ 25599084 (-)
G7599 LOC103353181,LOC102797720,LOC101487977 non-coding upstream 271460 25751170 ~ 25752341 (-)
G7600 LOC104957016,LOC106903860,LOC103469346,LOC102220538 non-coding upstream 277695 25757405 ~ 25758265 (-)
LOC120543531 pde6h,LOC101074909,LOC104944980,LOC103354149,LOC107382209,LOC103383788,LOC101158417,LOC106533555 other downstream 717212 24755932 ~ 24759618 (-)
si:ch211-243a20.3 si:ch211-243a20.3,LOC107676841,LOC107712233,LOC105901553 other downstream 807533 24665385 ~ 24669297 (-)
G7323 NA other downstream 941514 24532236 ~ 24535316 (-)
LOC120562828 elof1,LOC103353603,LOC103384163,LOC100701647,LOC101173766 other downstream 1591068 23882745 ~ 23885762 (-)
palm3 NA other downstream 1665809 23772856 ~ 23811021 (-)
G7589 NA other upstream 218551 25698261 ~ 25699557 (-)
G7603 LOC103353181 other upstream 304234 25783944 ~ 25788229 (-)
G7722 LOC103354873 other upstream 521814 26001524 ~ 26009217 (-)
polq LOC104947247,LOC104947243,LOC106593755 other upstream 595687 26075397 ~ 26094244 (-)
adamtsl7 NA other upstream 632304 26112014 ~ 26121649 (-)

Expression


Co-expression Network