si:ch211-196h16.12 (LOC101466180,LOC100708390,LOC102193965,LOC103356221,LOC103465598)


Basic Information

Item Value
gene id si:ch211-196h16.12
gene name LOC101466180,LOC100708390,LOC102193965,LOC103356221,LOC103465598
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17334937 ~ 17338618 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789756.1
ACTCCATCTGGATTCGGCAGGTCCAGGGGGTATCTGTTTTCACCACTACTGATCGCTCCGTCTTGTAGATTTCACTGAGACTCTTGTTGAAGAAGCAGGAAGCGAGAGAAAAACAGCCGCCTTCCTGCTGGTCCACATGGCCTGTAAGCACGTACACCACCTCTTTCATTCACCTCTATTCAGCTTCCTTCTCTACACCTGTGAGTCCAAGGGGAGCAGATTGACAGATCAGACAGCAAACAGGTTTTCTCAAACTACACACCTCAATGTGTAAGGGGATCTCCTACCTGCCCTCCTCATGCCTGGAGAAGGCAAAGGAGATGCGGGTGATGTTAAGCCATCTGGCTGAGACGCACCACAAGCACAAGATTCTGGATGGAAAAGCTGTCCACGACCTGGAAACTCTGCTTAACAACATACGCGGTCTGCAGGCGTTTCGTGGGTTCCTGCTTTCAGAGTTCAGCGAAGAGAACCTCGAGTTCTGGCTGGCCTGCGAGGACTACAGGCTGTCTCCTTCAAACCTGCAGAAGACCAAGTCCAGCAACATCTACGGCCAGTTTATCAACCCTGACGCTCCACAGGAGGTAAACTTGGACGCTGAGACCCGGGAAGCTCTGTTGAGTGTGACGGACTCTCCGTGTGCCGACACGTTCAACAAGGCTCAACAGAGAATCTACAATTTGATGGCGAAAGACTCCTTCCCGAGGTTCCTGCGCTCCCCTTACTGCATGGAGGCCATTAAAGCTTTTTAAAACATATAGTTTATTACCACAGACCCGCTTTAGAAATAAGTGCTGATGAATCTGTACTGCTTGATAGGTTGATTGTATTTTACCACTTATTTTAACAACTAGTTCgttttgtgattgttttctGTATGGTAGTGCTGTCCTTGTGCGCTGTATGCATAATGCATGCTGTTATCGTTATGACGCCGAGTTGTAGACATAGTTAAAAAGTCTCACATAAAAACCTCAATTATGAAGCTTACATCAAGATGCAACTACCTTGCACCTCTGGACTGCTGAGCTACAAGTCCACAAAGGATTTAAATAAATACCTCATAAAAGACAA
>XM_039789851.1
TAGATTTCACTGAGACTCTTGTTGAAGAAGCAGGAAGCGAGAGAAAAACAGCCGCCTTCCTGCTGGTGAAGCCTGCTGACGGCCAAGTGTCAGAtccgtgcatgcatGTCCACATGGCCTGTAAGCACGTACACCACCTCTTTCATTCACCTCTATTCAGCTTCCTTCTCTACACCTGTGAGTCCAAGGGGAGCAGATTGACAGATCAGACAGCAAACAGGTCGGCTATATAAGAGCAGCACACTGTAGTTTGGGAGGCTGACTGCCAGACTGACTGAAAAACTCTGAAGTTTTCTACCGTGTTGTCTACTCCGATCAAGTACAGCTCAGTCTGTACATTTTACCTTTGCAGGTTTTCTCAAACTACACACCTCAATGTGTAAGGGGATCTCCTACCTGCCCTCCTCATGCCTGGAGAAGGCAAAGGAGATGCGGGTGATGTTAAGCCATCTGGCTGAGACGCACCACAAGCACAAGATTCTGGATGGAAAAGCTGTCCACGACCTGGAAACTCTGCTTAACAACATACGCGGTCTGCAGGCGTTTCGTGGGTTCCTGCTTTCAGAGTTCAGCGAAGAGAACCTCGAGTTCTGGCTGGCCTGCGAGGACTACAGGCTGTCTCCTTCAAACCTGCAGAAGACCAAGTCCAGCAACATCTACGGCCAGTTTATCAACCCTGACGCTCCACAGGAGGTAAACTTGGACGCTGAGACCCGGGAAGCTCTGTTGAGTGTGACGGACTCTCCGTGTGCCGACACGTTCAACAAGGCTCAACAGAGAATCTACAATTTGATGGCGAAAGACTCCTTCCCGAGGTTCCTGCGCTCCCCTTACTGCATGGAGGCCATTAAAGCTTTTTAAAACATATAGTTTATTACCACAGACCCGCTTTAGAAATAAGTGCTGATGAATCTGTACTGCTTGATAGGTTGATTGTATTTTACCACTTATTTTAACAACTAGTTCgttttgtgattgttttctGTATGGTAGTGCTGTCCTTGTGCGCTGTATGCATAATGCATGCTGTTATCGTTATGACGCCGAGTTGTAGACATAGTTAAAAAGTCTCACATAAAAACCTCAATTATGAAGCTTACATCAAGATGCAACTACCTTGCACCTCTGGACTGCTGAGCTACAAGTCCACAAAGGATTTAAATAAATACCTCATAAAAGACAA
>XM_039789933.1
CTCCATCTGGATTCGGCAGGTCCAGGGGGTATCTGTTTTCACCACTACTGATCGCTCCGTCTTGTAGATTTCACTGAGACTCTTGTTGAAGAAGCAGGAAGCGAGAGAAAAACAGCCGCCTTCCTGCTGGTTTTCTCAAACTACACACCTCAATGTGTAAGGGGATCTCCTACCTGCCCTCCTCATGCCTGGAGAAGGCAAAGGAGATGCGGGTGATGTTAAGCCATCTGGCTGAGACGCACCACAAGCACAAGATTCTGGATGGAAAAGCTGTCCACGACCTGGAAACTCTGCTTAACAACATACGCGGTCTGCAGGCGTTTCGTGGGTTCCTGCTTTCAGAGTTCAGCGAAGAGAACCTCGAGTTCTGGCTGGCCTGCGAGGACTACAGGCTGTCTCCTTCAAACCTGCAGAAGACCAAGTCCAGCAACATCTACGGCCAGTTTATCAACCCTGACGCTCCACAGGAGGTAAACTTGGACGCTGAGACCCGGGAAGCTCTGTTGAGTGTGACGGACTCTCCGTGTGCCGACACGTTCAACAAGGCTCAACAGAGAATCTACAATTTGATGGCGAAAGACTCCTTCCCGAGGTTCCTGCGCTCCCCTTACTGCATGGAGGCCATTAAAGCTTTTTAAAACATATAGTTTATTACCACAGACCCGCTTTAGAAATAAGTGCTGATGAATCTGTACTGCTTGATAGGTTGATTGTATTTTACCACTTATTTTAACAACTAGTTCgttttgtgattgttttctGTATGGTAGTGCTGTCCTTGTGCGCTGTATGCATAATGCATGCTGTTATCGTTATGACGCCGAGTTGTAGACATAGTTAAAAAGTCTCACATAAAAACCTCAATTATGAAGCTTACATCAAGATGCAACTACCTTGCACCTCTGGACTGCTGAGCTACAAGTCCACAAAGGATTTAAATAAATACCTCATAAAAGACAA

Function

NR:

description
regulator of G-protein signaling 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789756.1 False 1074 mRNA 0.47 7 17334937 17338618
XM_039789851.1 True 1183 mRNA 0.47 6 17334937 17338553
XM_039789933.1 False 960 mRNA 0.47 6 17334937 17338617

Neighbor

gene id symbol gene type direction distance location
LOC120569451 NA coding downstream 43464 17286966 ~ 17291473 (-)
LOC120559819 NA coding downstream 78490 17246549 ~ 17256447 (-)
sgsh sgsh coding downstream 173781 17155731 ~ 17161156 (-)
npb npb coding downstream 180433 17152922 ~ 17154504 (-)
notum1b notum,LOC103356199,LOC102201337,LOC102290801,LOC107090768 coding downstream 339296 16985394 ~ 16995641 (-)
rfx1b NA coding upstream 30886 17369504 ~ 17385031 (-)
nthl1 nthl1,LOC102778712 coding upstream 84975 17423593 ~ 17428615 (-)
pkd1a pkd1 coding upstream 120156 17458774 ~ 17524846 (-)
exosc1 exosc1,LOC107700859 coding upstream 255398 17594016 ~ 17598848 (-)
pgam1b pgam1,pgm,LOC104945324,LOC104927840 coding upstream 264288 17602906 ~ 17606302 (-)
G5430 clg1h19orf53,LOC108236319,LOC103356219,LOC105917105,LOC106917567,LOC102229420,LOC106531096 non-coding downstream 1327 17331757 ~ 17333610 (-)
G5402 NA non-coding downstream 17117 17317276 ~ 17317820 (-)
G5418 NA non-coding downstream 23120 17311570 ~ 17311817 (-)
G5393 NA non-coding downstream 83473 17248985 ~ 17251464 (-)
G5376 NA non-coding downstream 148555 17182647 ~ 17186382 (-)
G5435 LOC104952676 non-coding upstream 10257 17348875 ~ 17350975 (-)
G5449 NA non-coding upstream 61287 17399905 ~ 17448034 (-)
G5506 NA non-coding upstream 219223 17557841 ~ 17613208 (-)
G5522 NA non-coding upstream 278569 17617187 ~ 17645665 (-)
LOC120560186 NA non-coding upstream 360642 17699260 ~ 17700389 (-)
LOC120558720 NA other downstream 987015 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 1649298 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2430708 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 2615835 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 3292427 14018902 ~ 14042510 (-)
LOC120569099 NA other upstream 73435 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 372021 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 478889 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 497286 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 541250 17879868 ~ 17881759 (-)

Expression


Co-expression Network