Item | Value |
---|---|
gene id | ptprdb |
gene name | LOC103353169,LOC102314524,LOC102204731 |
gene type | coding |
species | eurasian perch (Perca fluviatilis) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_053112.1 |
NCBI id | CM020909.1 |
chromosome length | 48724115 |
location | 24994114 ~ 25171062 (-) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
description |
---|
PREDICTED: receptor-type tyrosine-protein phosphatase delta-like |
id | description |
---|---|
K05695 | PTPRF, LAR; receptor-type tyrosine-protein phosphatase F |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_039791488.1 | True | 9471 | mRNA | 0.49 | 46 | 24994114 | 25171058 |
XM_039791570.1 | False | 9441 | mRNA | 0.49 | 42 | 24994114 | 25097320 |
XM_039791659.1 | False | 9462 | mRNA | 0.49 | 45 | 24994114 | 25171058 |
XM_039791737.1 | False | 9459 | mRNA | 0.49 | 45 | 24994114 | 25171058 |
XM_039791821.1 | False | 9453 | mRNA | 0.49 | 45 | 24994114 | 25171058 |
XM_039791910.1 | False | 9450 | mRNA | 0.49 | 44 | 24994114 | 25171058 |
XM_039791999.1 | False | 9446 | mRNA | 0.49 | 45 | 24994114 | 25171057 |
XM_039792079.1 | False | 9444 | mRNA | 0.49 | 44 | 24994114 | 25171058 |
XM_039792165.1 | False | 9441 | mRNA | 0.49 | 44 | 24994114 | 25171058 |
XM_039792249.1 | False | 9432 | mRNA | 0.49 | 43 | 24994114 | 25171058 |
XM_039792332.1 | False | 9433 | mRNA | 0.49 | 45 | 24994114 | 25171062 |
XM_039792413.1 | False | 9407 | mRNA | 0.49 | 42 | 24994114 | 25171057 |
XM_039792480.1 | False | 9402 | mRNA | 0.49 | 44 | 24994114 | 25171055 |
XM_039792527.1 | False | 8235 | mRNA | 0.48 | 41 | 24994114 | 25171052 |
XM_039792536.1 | False | 8226 | mRNA | 0.48 | 40 | 24994114 | 25171052 |
XM_039792576.1 | False | 8223 | mRNA | 0.48 | 40 | 24994114 | 25171052 |
XM_039792655.1 | False | 8165 | mRNA | 0.48 | 39 | 24994114 | 25171048 |
XM_039792717.1 | False | 8156 | mRNA | 0.48 | 38 | 24994114 | 25171048 |
XM_039792801.1 | False | 9386 | mRNA | 0.49 | 39 | 24994114 | 25097319 |
XM_039792888.1 | False | 9333 | mRNA | 0.49 | 37 | 24994114 | 25097317 |
XM_039792977.1 | False | 9396 | mRNA | 0.49 | 39 | 24994114 | 25097320 |
XM_039793059.1 | False | 9407 | mRNA | 0.49 | 40 | 24994114 | 25097319 |
XM_039793132.1 | False | 8167 | mRNA | 0.48 | 35 | 24994114 | 25097312 |
XM_039793210.1 | False | 8107 | mRNA | 0.48 | 33 | 24994114 | 25097309 |
XM_039793285.1 | False | 8095 | mRNA | 0.48 | 32 | 24994114 | 25097309 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
ecpas | kiaa0368 | coding | downstream | 35846 | 24932476 ~ 24958268 (-) |
clockb | LOC108241552,LOC100703460,LOC102293337 | coding | downstream | 80056 | 24882098 ~ 24914058 (-) |
fip1l1b | LOC103353163 | coding | downstream | 142881 | 24837553 ~ 24851233 (-) |
LOC120557916 | LOC104968030 | coding | downstream | 157535 | 24832161 ~ 24836579 (-) |
LOC120557339 | NA | coding | downstream | 165338 | 24826409 ~ 24828776 (-) |
si:dkey-92j12.5 | LOC104962067,LOC103353171 | coding | upstream | 87595 | 25258657 ~ 25298560 (-) |
smim18 | smim18 | coding | upstream | 296035 | 25467097 ~ 25470690 (-) |
LOC120547284 | dctn6,LOC102799503 | coding | upstream | 305768 | 25476830 ~ 25479710 (-) |
LOC120568337 | NA | coding | upstream | 341527 | 25512589 ~ 25529402 (-) |
LOC120568214 | NA | coding | upstream | 405717 | 25576779 ~ 25581678 (-) |
G7388 | NA | non-coding | downstream | 182030 | 24811462 ~ 24812084 (-) |
G7383 | pde6h,LOC101074909,LOC103354149,LOC106533555 | non-coding | downstream | 230424 | 24761914 ~ 24763690 (-) |
G7352 | grin2b,LOC106927073,LOC103137761 | non-coding | downstream | 341893 | 24651943 ~ 24652221 (-) |
G7351 | LOC106952308,LOC103137761,LOC106515218,LOC103468798,LOC106927073 | non-coding | downstream | 351011 | 24642823 ~ 24643103 (-) |
G7350 | NA | non-coding | downstream | 371558 | 24622350 ~ 24622556 (-) |
G7506 | LOC103353170,LOC104960336 | non-coding | upstream | 82244 | 25253306 ~ 25254219 (-) |
G7551 | NA | non-coding | upstream | 304381 | 25475443 ~ 25512353 (-) |
LOC120568431 | NA | non-coding | upstream | 353793 | 25524855 ~ 25525679 (-) |
LOC120568384 | NA | non-coding | upstream | 375073 | 25546135 ~ 25549752 (-) |
G7577 | NA | non-coding | upstream | 427636 | 25598698 ~ 25599084 (-) |
LOC120543531 | pde6h,LOC101074909,LOC104944980,LOC103354149,LOC107382209,LOC103383788,LOC101158417,LOC106533555 | other | downstream | 234496 | 24755932 ~ 24759618 (-) |
si:ch211-243a20.3 | si:ch211-243a20.3,LOC107676841,LOC107712233,LOC105901553 | other | downstream | 324817 | 24665385 ~ 24669297 (-) |
G7323 | NA | other | downstream | 458798 | 24532236 ~ 24535316 (-) |
LOC120562828 | elof1,LOC103353603,LOC103384163,LOC100701647,LOC101173766 | other | downstream | 1108352 | 23882745 ~ 23885762 (-) |
palm3 | NA | other | downstream | 1183093 | 23772856 ~ 23811021 (-) |
G7589 | NA | other | upstream | 527199 | 25698261 ~ 25699557 (-) |
G7603 | LOC103353181 | other | upstream | 612882 | 25783944 ~ 25788229 (-) |
G7722 | LOC103354873 | other | upstream | 830462 | 26001524 ~ 26009217 (-) |
polq | LOC104947247,LOC104947243,LOC106593755 | other | upstream | 904335 | 26075397 ~ 26094244 (-) |
adamtsl7 | NA | other | upstream | 940952 | 26112014 ~ 26121649 (-) |