pgam1b (pgam1,pgm,LOC104945324,LOC104927840)


Basic Information

Item Value
gene id pgam1b
gene name pgam1,pgm,LOC104945324,LOC104927840
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17602906 ~ 17606302 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793551.1
TGGTGGAAACCAGCAGGAAGAGCGCTCGTGTCGTGAGATCCGTCAAATTCGGACAGACCAGCCAACTCTAGTACTGCTACGACAGATTATCCCTCCAGACTACCAAAAATACTGCGCCCGCTTCTTAGTAGCCGTCTTTGGGGTTGCGGCGAAATCAAGACAAATCTGCGAACGTTGCTGCCGCACTTTAAGAAGAGTCACTTACCCCACATTTCCCGGAAATACATCGCAGAGGGCATCGGTGTGAGGATGGCTGCGTACAAACTGGTCCTGATCCGCCATGGAGAGAGCTGCTGGAACCAGGAAAACCGCTTCTGCGGCTGGTTCGACGCGGACCTGAGTGAGACCGGGGAGCATGAGGCAAAGAGAGGTGGACAGGCCTTAAAAGATGCTGGCTATGAATTTGATATTTGCTACACCTCAGTCCTAAAGAGGGCCATCCGCACCCTGTGGTTTGTTCTGGACAGCATTGACCAGATGTGGCTGCCCGTCCACCGGACCTGGCGCCTGAATGAGCGCCACTACGGGGGCCTGACTGGGCTGAACAAGGCTGAAACGGCAGCTAAACACGGAGAGGCCCAGGTCAAGATCTGGAGGCGCTCTTTTGACATTCCTCCCCCATCCATGGACGAAGGGCATGACTTCTATCAGAGCATCAGCAAGGACCGGCGTTATGCCGACCTGACAGAGGACCAGCTTCCCAGCTGTGAGAGTCTCAAGGACACCATCGCCAGGGCTCTGCCCTTCTGGAACGAAGAGATCGTTCCACAGATCAAAGAGGGAAAGAGGGTGCTGATTGCTGCCCATGGCAACAGTCTCCGCGGCATCGTCAAGCATCTTGAGGGTATGTCAGAGGAGGTCATCATGGAGCTGAACCTGCCCACAGGTATCCCCATTGTGTATGAGCTGGACAAGAACCTGAAGCCTTTAGGACCCATGCAGTTTCTGGGAGATGAGGAGACCGTTAAGAAGGCAATGGAAGCTGTGGCTGCTCAGGGCAAAGCCAAAAAATAGAATCTCCCCCTCTGTAGATGAGCTAGAGTATACATTGCCCATGTGCTGTTCAGTTATCAAGTTAATAGAAGGTAAATTACTGTCACCACAGACTTgcgtacacagacacacaacgtGCACcttatttttattgatttgattGGTCTTTACTTTGTGACATGCCGAAACATACATGCCATTATAACACAATGGATATCAGCTGTAATATGGTTTAAGCACTGACCAAAATGCAAAATTCGGGACCAGTGGATAGGACCTAATATAAACTTACCCTGCAGTCATCCCATGTATTCCTTCCCATTTCTGACCCATGTAGGACTGCTAAGTGGGAGCAGTGTAACCTACGAATAAACACTGGCTGTTGTTAAAAGGGCAAGTTGATATGCACTGCTGATTTTTGTTTGCTGTGGCATtgtgagaaaaataataaatgttgtgCGCCATTATGTGA

Function

symbol description
pgam1 Enables phosphoglycerate mutase activity and protein kinase binding activity. Involved in glycolytic process; regulation of generation of precursor metabolites and energy; and respiratory burst. Located in cytosol.
pgm phosphoglucomutase

NR:

description
phosphoglycerate mutase 1

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0004619 phosphoglycerate mutase activity molecular_function

KEGG:

id description
K01834 PGAM, gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793551.1 True 1465 mRNA 0.50 4 17602906 17606302

Neighbor

gene id symbol gene type direction distance location
exosc1 exosc1,LOC107700859 coding downstream 4058 17594016 ~ 17598848 (-)
pkd1a pkd1 coding downstream 78060 17458774 ~ 17524846 (-)
nthl1 nthl1,LOC102778712 coding downstream 174291 17423593 ~ 17428615 (-)
rfx1b NA coding downstream 217875 17369504 ~ 17385031 (-)
si:ch211-196h16.12 LOC101466180,LOC100708390,LOC102193965,LOC103356221,LOC103465598 coding downstream 264288 17334937 ~ 17338618 (-)
avpi1 NA coding upstream 7851 17614153 ~ 17617081 (-)
crtac1a LOC104945331,LOC103368018 coding upstream 35004 17641306 ~ 17647822 (-)
LOC120569316 LOC104945333,LOC102299380,LOC102207980,LOC101475478 coding upstream 50845 17657147 ~ 17676202 (-)
LOC120562183 tekt4 coding upstream 71368 17677670 ~ 17681784 (-)
LOC120560159 NA coding upstream 87255 17693557 ~ 17754482 (-)
G5449 NA non-coding downstream 154872 17399905 ~ 17448034 (-)
G5435 LOC104952676 non-coding downstream 251931 17348875 ~ 17350975 (-)
G5430 clg1h19orf53,LOC108236319,LOC103356219,LOC105917105,LOC106917567,LOC102229420,LOC106531096 non-coding downstream 269296 17331757 ~ 17333610 (-)
G5402 NA non-coding downstream 285086 17317276 ~ 17317820 (-)
G5418 NA non-coding downstream 291089 17311570 ~ 17311817 (-)
G5522 NA non-coding upstream 10885 17617187 ~ 17645665 (-)
LOC120560186 NA non-coding upstream 92958 17699260 ~ 17700389 (-)
G5608 NA non-coding upstream 96914 17703216 ~ 17734751 (-)
LOC120560178 NA non-coding upstream 131770 17738072 ~ 17739847 (-)
G5616 NA non-coding upstream 175478 17781780 ~ 17782013 (-)
LOC120569099 NA other downstream 181808 17412053 ~ 17421098 (-)
LOC120558720 NA other downstream 1254984 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 1917267 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2698677 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 2883804 14712144 ~ 14719102 (-)
LOC120560175 NA other upstream 104337 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 211205 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 229602 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 273566 17879868 ~ 17881759 (-)
G5930 LOC102307335,LOC101466373 other upstream 1278666 18884968 ~ 18890220 (-)

Expression


Co-expression Network