stx8 (stx8)


Basic Information

Item Value
gene id stx8
gene name stx8
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 22785495 ~ 22834464 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794020.1
TAGCTTGCCGTTATGACGTCACACCCAAACAAGAAATAGTTTGCTGGTGATTATTATTACTGCCGGGTGGTTCAAACTAAGTGGATTTTCTCTTCATTGCTTACTTTTATCATAATGTCTCAGGATCCGTGGTTACAGAATTACGATGCCAATTGTCGCTTGGCACAGGAAATAGCAGAAAACATTCATGAACGGAACAGGCAGCAGAGAACAGGGGGGAACCCTGCAAAGATCAACATGACGCTACGGGCATCACTGCAGAAGCTCAAACAGAATATTGCCCAGCTTAAAGAGGGTTTGTTGCGAGCATCATCAACTCGGCGCATAATGCAATCGGAAGCTGATAGGAGGCAGAACCTTATTGATGACCTGCTAACCAGAGAGAAGCAGCTCAATGCCACCTTCAAGGGAGACATCGCAGAGCCTGAACCTTCCAGGTCGACGTTGATGGGAGCAGAGGCAGGAACGAGTGGAGGTGTTGTGGCCAACCCCTGGCTGATCAACGAATCAGAGGAGACCTCAGGGCTGACCTTTGGCGAGatcaaacaacagcaacaacgaGTCATTGAAGCCCAGGATGCAGGCTTGGATGCACTAGCGGCTGTCATCAGCAGACAGAAGATAATGGGCAAGGAGATTGGCAATGAGCTGGATGAACAGAATGAAATCATCGACGACCTCGCACATCTTGTGGACAAGACAGACGACAGGATTCGTAACGAGACACGAAGGGTGAAGCTGGTGGAGACCAAGTCGGCCTCCTGCGGGATGCTGGTGGTGATCGTACTGCTTCTTATTGCCATCATAGTCGTCGCCGTGTGGCCTGTGTAGCAGACGAGGACAGCAGTGATCATGGACCTGTGCTCAACGACTACTACAATGACACTTTGGTGCAGAATACCAGCTTGAAACCTTTGCATCTGCAGTACACACGTACAGTCATTTAAACACTTTCTCACACAgattttatttagttattcTTCATCTTCATATTGAGACAAAGGTCACTGGTGGCTTCCCAACCAAGCCAATGTGAAATAAAGACTTAAGTCCTATAGCAGCACACTTACATTTTTCTATACAGTAAATCGTTGGTTGGGTGAAAGACATTATTAACCCtgcagaagattttttttttttctatagaatatgttgctacaatgtaaattgTCCTCTGTACCAGTTGTTCAAGTGGATATTAAAATGACAATGTATCAAATTGTTAAATTATATGGAGGTTTgtaagcctttaaaaaaaaaaaattgtagctTGGACTGTGGCAAAAAAAACCCAACAGTAGGACCTCCCGCAGGTAGCAGGAGCTTTCCTTTCATAAGTCTGGATGTGGTCTGGGCTGAGGCTCACACTGGGCACTGTAATTCCGCAAGCTTTGCAATATTCACACTCCCTTATATTTACCCATGCATTACTGTAGCAGCTGTAATGTTATCATTTGTCTTGGGATTTTATAAAGTTTATAGAATAGCTCTCAGCCAAAACAAACAGCTCGGCTGTGTAACTAACATGGCTGCTTTCCTTCCTTGTAAATCAATTCCACTTGTAATTTCtaataaatgacatttccaGTTATTAGTCCCTggactgctgtctgtctgcgtTAACGCTCAGGGTTTACTCTGGAGGATTGCAGTTTTGTAACATATTTAGCTGGAAACACTAGTATCACCATTTTTCCATAGCGAAATCTGCATAATATTGTTTTCTCTACCGTACATTTTATGAAGTGGCAACCAGTAAATGGAGGAAGGCGGACTATATTCCTTAGTGTTAACTTAACaactaaataattaaaatgtaatgattCAAATCAACAGAGGCAAATGGTTTTCAATGTAAcaagtttatttcaactgaAAATCTGAATTTAGTTCTACCAGGTTGGTCTGTTCAGTAGTTATGTCTTTCTTTAATGGCAATGATctaaacaaccacaaacaagttaaaaaaaaaaaaaaaa

Function

symbol description
stx8 Enables SNARE binding activity. Predicted to be involved in intracellular protein transport; vesicle docking; and vesicle fusion. Predicted to be located in membrane. Predicted to be part of SNARE complex. Predicted to be active in endomembrane system. Predicted to be integral component of membrane. Orthologous to human STX8 (syntaxin 8).

NR:

description
syntaxin-8-like

GO: NA

KEGG:

id description
K08501 STX8; syntaxin 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794020.1 True 1979 mRNA 0.42 8 22785495 22834464

Neighbor

gene id symbol gene type direction distance location
pik3r5 pik3r5 coding downstream 64680 22692787 ~ 22720815 (-)
LOC120558762 LOC108242699,LOC106536899,LOC103354898,LOC100703987,LOC103383580 coding downstream 120282 22654181 ~ 22665213 (-)
si:dkey-45d16.4 LOC104950130 coding downstream 143751 22635884 ~ 22641744 (-)
LOC120558725 LOC103354901,LOC103383579 coding downstream 150555 22619670 ~ 22634940 (-)
LOC120562917 LOC103354903 coding downstream 246985 22412600 ~ 22538510 (-)
mchr1a LOC103354888,LOC104947992,LOC102295449,LOC102791021 coding upstream 159404 22993868 ~ 22997980 (-)
LOC120561952 NA coding upstream 336343 23170807 ~ 23173617 (-)
LOC120546964 NA coding upstream 585816 23420280 ~ 23431271 (-)
znf207b znf207,LOC104947983,LOC103374438 coding upstream 596473 23430937 ~ 23438268 (-)
rhbdl3 rhbdl3,LOC102785192 coding upstream 604367 23438831 ~ 23501859 (-)
G6834 NA non-coding downstream 131709 22651532 ~ 22653786 (-)
LOC120562974 NA non-coding downstream 181542 22601388 ~ 22603953 (-)
G6762 ddx39a,LOC103150096 non-coding downstream 460112 22324550 ~ 22325383 (-)
G6764 NA non-coding downstream 519503 22264384 ~ 22265992 (-)
G6731 NA non-coding downstream 693938 22090500 ~ 22091557 (-)
G6879 NA non-coding upstream 90367 22924831 ~ 22933891 (-)
G6880 usp43 non-coding upstream 138418 22972882 ~ 22973326 (-)
G6907 LOC107382332,LOC106515271,LOC102218172,LOC108242722,LOC103383557 non-coding upstream 218855 23053319 ~ 23058150 (-)
LOC120556418 NA non-coding upstream 295990 23130454 ~ 23135775 (-)
G6947 LOC104947985,LOC103354881 non-coding upstream 415731 23250195 ~ 23253876 (-)
LOC120565362 pik3r6 other downstream 93162 22665375 ~ 22692333 (-)
LOC120556502 LOC104944681,LOC103364456 other downstream 449912 22328519 ~ 22335583 (-)
G6592 ube2o,LOC106534564 other downstream 1075683 21708540 ~ 21709812 (-)
LOC120566957 NA other downstream 1216436 21563091 ~ 21569059 (-)
LOC120574674 NA other downstream 2592157 20187281 ~ 20193338 (-)
G6881 usp43,LOC104947996 other upstream 147461 22981925 ~ 22988500 (-)
G6924 NA other upstream 254036 23088500 ~ 23164937 (-)
G6943 NA other upstream 379392 23213856 ~ 23242290 (-)
G7065 NA other upstream 738241 23572705 ~ 23573049 (-)
LOC120557242 NA other upstream 877363 23711827 ~ 23720750 (-)

Expression


Co-expression Network