LOC120555782


Basic Information

Item Value
gene id LOC120555782
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 23650623 ~ 23656256 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794846.1
CCTGTATCTAAGCTAACTACACAACTACTGTCGTCCTCTGCTAAGGCCCTGAGAGGAACAAACTCTAAACAAACATAGCTAACTATCTTTAACGCCAGGGGGTTAATGTTTTGATATTTGAAGAAGACTGTATGTCTAACCTAAAAACCTAACTCACCTGGTTATTGGCGTATCGCCTAACGTTACTTCCTCTTTGTATATCCCGGGTATTCCCAGTTTGTGCTAACGTCACACCACCGGGGGAGGTGTGCCTCTGGCTGCAGTAACGTTACAGATACATTACAGGTGACGTGATGCCTCAGAATGGTATGAACTATGAGGGTAGAAGAGGAGGGAAGCGTCACAACACCTGTAAAGCCAACGGTCAGGTTCCAGGCACAGGTTTGGTTAATGGAGCTGTTGTTCACAATGGCTGCCCAGTTGATGCCACTAGAACCAGTGAGAGAACCCCAGCTGGCACACTGAATGGTACCAAACCACAATGCATGGTTGATGGTTATATTAACCAGAGATACAAGGGCAGGAGTACAAAAGCAGCGCCCCCAAGGACAATCGGGAGACATGGAAGCACGATTTCAGCTGTCACTGATGCCTCAGCAGCTGGCAGGGTCCACAATGCAGGAACTCCAGGTGGTATCTCAGTGAATGGGGACACCGGTCTAGACACTGTTGCTTTGCCATGTAATTCTGACCAAATGGCACCACAGCCCAGCCTGTCAGCAGCAGCAAAGATCCAGAGAAGAAGGCCGAAATTCAGACATAAAAAGAGAGACACTGAAGTCGTCCATCCGGTGTACCCTACTCGCCCATTGATGCCCCCACAAGAGAAGGAAGACTGGGAAAGTGAGATCCAAGAGGTCACAAAGACTGACTGGGGAAAGTTCTGTTTTGGAGACACACCCTacgGTCCACAAGATGTGCTCCATTTTGATTTGCGCGATTTGACACTCAAGCAAAGGGACACAGTGGACCTGCCGGTGACAGCCAATTACAACCCAGCCGTACACCACCCTCACCCTGTCAAATGGTCCTGCTACAGCATTCCCACGGAGACGGACCAGTTCGCAGACGCTGACGAGTAAGCCAGACCAATGTTGTTCTGTTAAAGGATTGGTAGAAATCAATGTTCACATACCAAAAGTAACTAAGGGGTTCTGCTGTGAATCGTGTTAGCCCTTATTGGCATTGTACAGATTTGGGGATCCTGGATAGTACCCATGCTTAGAATATTTGTTTAGTCAGCATGAGTCTTATTTTCCTCATCTAAAACATTAttggatatttttttaatttaaaaattctCTGGGTTAATGCTATCTCAGGTCAAAGATTATAGGGTGGAGCCTAGGTTGcaatcaggttgtttttttttattgcatgttttattttgtattttatattcaGATTTTATATTGCAACATATTAATTTGTCTTCTGTGATCTTAAGGAATGATTTTAGATAAACTGCCATACTTTGCTGTTGTACCGCTTCAGTGACTGTTGTTACTGAAAATGGTCATGCATTTACTGTTCTTCCATTTCATATCTTCATCATTTTGCTAGTATTCCAAAAAACTCCAATAATAGTTTTTATGtaaattgtgtattttgtgttttataatgCCTGAAATGGGCACACTGTTGGTATTATAAGTTTCTCTTTTGAGCTATCAGTTCTATTGTTTATCAATTGCACGTTCACAACAAGCACATGAAGCAACTATTTTAATTTGGAGCCAACCTAACCAAGAAATTATGGTTTGATTatgtaacaacaacaaatcGTTATATGCCCTTTTCAGACTTTCATTTTCACAACCACAATAAATCCAATTTTCTTTTA
>XM_039794855.1
tgtaatGGGGATGTTAGCATGCAGCAGGTCAGCTGTCCTTCATCGGGGTTGGGTAGCTAGCTATATATCTATGGGGGTTGGGAAGagtagatagctagctagctactgctgAGTAAATAGAAGTGATTATGAATAACGCTGATGTTAACTCTGAAGCAGGTACAGCAATGGTGTGAAAATTAATGTTAACATAACGGAGTGTATTTGATTGATTTTAAGGGGAGCATGGCTAATGTTATAGCTACATTGTAGCAAACAGTAAAAGTTCACATAAACAACGCCAGATCAGCGAGGAGAACCAATAGTGGAATAAAAGTCAAAAGAAACTGAAGATGAAGATCAAACCAATAACTTTAATGGGCCTTTTCACCGCCCACTTGAACGCGCACAGATTGTGCTCTGCCGCCCAGCGTTCACCGTGCTGAACTTGTGGCAGGAACCGTTTAAAAACGCCTTTGTGTTTTTTGGGGAAACGCTCTTGCAGATACATTACAGGTGACGTGATGCCTCAGAATGGTATGAACTATGAGGGTAGAAGAGGAGGGAAGCGTCACAACACCTGTAAAGCCAACGGTCAGGTTCCAGGCACAGGTTTGGTTAATGGAGCTGTTGTTCACAATGGCTGCCCAGTTGATGCCACTAGAACCAGTGAGAGAACCCCAGCTGGCACACTGAATGGTACCAAACCACAATGCATGGTTGATGGTTATATTAACCAGAGATACAAGGGCAGGAGTACAAAAGCAGCGCCCCCAAGGACAATCGGGAGACATGGAAGCACGATTTCAGCTGTCACTGATGCCTCAGCAGCTGGCAGGGTCCACAATGCAGGAACTCCAGGTGGTATCTCAGTGAATGGGGACACCGGTCTAGACACTGTTGCTTTGCCATGTAATTCTGACCAAATGGCACCACAGCCCAGCCTGTCAGCAGCAGCAAAGATCCAGAGAAGAAGGCCGAAATTCAGACATAAAAAGAGAGACACTGAAGTCGTCCATCCGGTGTACCCTACTCGCCCATTGATGCCCCCACAAGAGAAGGAAGACTGGGAAAGTGAGATCCAAGAGGTCACAAAGACTGACTGGGGAAAGTTCTGTTTTGGAGACACACCCTacgGTCCACAAGATGTGCTCCATTTTGATTTGCGCGATTTGACACTCAAGCAAAGGGACACAGTGGACCTGCCGGTGACAGCCAATTACAACCCAGCCGTACACCACCCTCACCCTGTCAAATGGTCCTGCTACAGCATTCCCACGGAGACGGACCAGTTCGCAGACGCTGACGAGTAAGCCAGACCAATGTTGTTCTGTTAAAGGATTGGTAGAAATCAATGTTCACATACCAAAAGTAACTAAGGGGTTCTGCTGTGAATCGTGTTAGCCCTTATTGGCATTGTACAGATTTGGGGATCCTGGATAGTACCCATGCTTAGAATATTTGTTTAGTCAGCATGAGTCTTATTTTCCTCATCTAAAACATTAttggatatttttttaatttaaaaattctCTGGGTTAATGCTATCTCAGGTCAAAGATTATAGGGTGGAGCCTAGGTTGcaatcaggttgtttttttttattgcatgttttattttgtattttatattcaGATTTTATATTGCAACATATTAATTTGTCTTCTGTGATCTTAAGGAATGATTTTAGATAAACTGCCATACTTTGCTGTTGTACCGCTTCAGTGACTGTTGTTACTGAAAATGGTCATGCATTTACTGTTCTTCCATTTCATATCTTCATCATTTTGCTAGTATTCCAAAAAACTCCAATAATAGTTTTTATGtaaattgtgtattttgtgttttataatgCCTGAAATGGGCACACTGTTGGTATTATAAGTTTCTCTTTTGAGCTATCAGTTCTATTGTTTATCAATTGCACGTTCACAACAAGCACATGAAGCAACTATTTTAATTTGGAGCCAACCTAACCAAGAAATTATGGTTTGATTatgtaacaacaacaaatcGTTATATGCCCTTTTCAGACTTTCATTTTCACAACCACAATAAATCCAATTTTCTTTTA
>XM_039794864.1
AAAGTTAGCTAAGTTATGGGGTTGATTTTCcattaaacatgtttattgGAAGGTTGCCTAGCAGTATGTTGTTAACTGGCTTGCTTTTCTTTATGATACATTACAGGTGACGTGATGCCTCAGAATGGTATGAACTATGAGGGTAGAAGAGGAGGGAAGCGTCACAACACCTGTAAAGCCAACGGTCAGGTTCCAGGCACAGGTTTGGTTAATGGAGCTGTTGTTCACAATGGCTGCCCAGTTGATGCCACTAGAACCAGTGAGAGAACCCCAGCTGGCACACTGAATGGTACCAAACCACAATGCATGGTTGATGGTTATATTAACCAGAGATACAAGGGCAGGAGTACAAAAGCAGCGCCCCCAAGGACAATCGGGAGACATGGAAGCACGATTTCAGCTGTCACTGATGCCTCAGCAGCTGGCAGGGTCCACAATGCAGGAACTCCAGGTGGTATCTCAGTGAATGGGGACACCGGTCTAGACACTGTTGCTTTGCCATGTAATTCTGACCAAATGGCACCACAGCCCAGCCTGTCAGCAGCAGCAAAGATCCAGAGAAGAAGGCCGAAATTCAGACATAAAAAGAGAGACACTGAAGTCGTCCATCCGGTGTACCCTACTCGCCCATTGATGCCCCCACAAGAGAAGGAAGACTGGGAAAGTGAGATCCAAGAGGTCACAAAGACTGACTGGGGAAAGTTCTGTTTTGGAGACACACCCTacgGTCCACAAGATGTGCTCCATTTTGATTTGCGCGATTTGACACTCAAGCAAAGGGACACAGTGGACCTGCCGGTGACAGCCAATTACAACCCAGCCGTACACCACCCTCACCCTGTCAAATGGTCCTGCTACAGCATTCCCACGGAGACGGACCAGTTCGCAGACGCTGACGAGTAAGCCAGACCAATGTTGTTCTGTTAAAGGATTGGTAGAAATCAATGTTCACATACCAAAAGTAACTAAGGGGTTCTGCTGTGAATCGTGTTAGCCCTTATTGGCATTGTACAGATTTGGGGATCCTGGATAGTACCCATGCTTAGAATATTTGTTTAGTCAGCATGAGTCTTATTTTCCTCATCTAAAACATTAttggatatttttttaatttaaaaattctCTGGGTTAATGCTATCTCAGGTCAAAGATTATAGGGTGGAGCCTAGGTTGcaatcaggttgtttttttttattgcatgttttattttgtattttatattcaGATTTTATATTGCAACATATTAATTTGTCTTCTGTGATCTTAAGGAATGATTTTAGATAAACTGCCATACTTTGCTGTTGTACCGCTTCAGTGACTGTTGTTACTGAAAATGGTCATGCATTTACTGTTCTTCCATTTCATATCTTCATCATTTTGCTAGTATTCCAAAAAACTCCAATAATAGTTTTTATGtaaattgtgtattttgtgttttataatgCCTGAAATGGGCACACTGTTGGTATTATAAGTTTCTCTTTTGAGCTATCAGTTCTATTGTTTATCAATTGCACGTTCACAACAAGCACATGAAGCAACTATTTTAATTTGGAGCCAACCTAACCAAGAAATTATGGTTTGATTatgtaacaacaacaaatcGTTATATGCCCTTTTCAGACTTTCATTTTCACAACCACAATAAATCCAATTTTCTTTTA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794846.1 False 1843 mRNA 0.42 4 23650623 23656256
XM_039794855.1 True 2053 mRNA 0.42 4 23650623 23655789
XM_039794864.1 False 1664 mRNA 0.42 4 23650623 23655950

Neighbor

gene id symbol gene type direction distance location
suz12b suz12 coding downstream 94373 23543467 ~ 23556250 (-)
atad5b NA coding downstream 108662 23535582 ~ 23541961 (-)
LOC120562252 adap2,LOC102784227 coding downstream 118581 23525332 ~ 23532042 (-)
rhot1b LOC103373013,LOC101484650,LOC100702459,LOC102784702,LOC102202739 coding downstream 126461 23508785 ~ 23524162 (-)
rhbdl3 rhbdl3,LOC102785192 coding downstream 148764 23438831 ~ 23501859 (-)
rab11fip4b rab11fip4,LOC102782519 coding upstream 1081 23657337 ~ 23685439 (-)
LOC120556266 LOC103353763,LOC100700287 coding upstream 410672 24066928 ~ 24068828 (-)
lyl1 LOC105910150 coding upstream 435411 24091667 ~ 24096223 (-)
LOC120569492 NA coding upstream 477641 24133897 ~ 24135669 (-)
zglp1 zglp1 coding upstream 481132 24137388 ~ 24145207 (-)
G7069 NA non-coding downstream 66101 23584200 ~ 23584522 (-)
G7067 NA non-coding downstream 73494 23576928 ~ 23577129 (-)
LOC120555765 NA non-coding downstream 79589 23566760 ~ 23571034 (-)
G6995 NA non-coding downstream 142063 23508274 ~ 23508560 (-)
G6993 NA non-coding downstream 221478 23427512 ~ 23429145 (-)
LOC120556236 NA non-coding upstream 281153 23937409 ~ 23943573 (-)
G7141 NA non-coding upstream 359203 24015459 ~ 24055760 (-)
LOC120556287 NA non-coding upstream 400245 24056501 ~ 24059844 (-)
G7179 NA non-coding upstream 426257 24082513 ~ 24084276 (-)
LOC120567450 NA non-coding upstream 440436 24096692 ~ 24099093 (-)
G7065 NA other downstream 77574 23572705 ~ 23573049 (-)
G6943 NA other downstream 408333 23213856 ~ 23242290 (-)
G6924 NA other downstream 485686 23088500 ~ 23164937 (-)
G6881 usp43,LOC104947996 other downstream 662123 22981925 ~ 22988500 (-)
LOC120565362 pik3r6 other downstream 958290 22665375 ~ 22692333 (-)
LOC120557242 NA other upstream 55571 23711827 ~ 23720750 (-)
si:ch211-207j7.2 NA other upstream 78108 23734364 ~ 23746031 (-)
G7071 NA other upstream 95770 23752026 ~ 23768841 (-)
palm3 NA other upstream 116600 23772856 ~ 23811021 (-)
LOC120562828 elof1,LOC103353603,LOC103384163,LOC100701647,LOC101173766 other upstream 226489 23882745 ~ 23885762 (-)

Expression


Co-expression Network