LOC120555967


Basic Information

Item Value
gene id LOC120555967
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 35688489 ~ 35691028 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795205.1
GCGAATAAAACAGCGTAGACAAGAGCTTTTCGCGGTAACGTAGCTATCGCGTTAATATGGCTATTGACCATCAAAGGGTCGCCTAAATATGACGTCGCTACACGACCTTTTTAAAATGGATGCTAGAAGGCATCGATGTCGTTATAGCATCATGTCTCAGACTCTCAGTAAAGGAAAACGATTTGCCTGCATCAACCCCAAGCAGAACATTTCTGACTTCCCTGCTTTGAAGGACTGTCTGCCAGGCAGGTATGATTACCATGTATGTGATTATAAAACATTAAGTGAGACAGGTGATCATATTAACTATAGGGCCATTCTTCGGATGGCCTTGTACACAGAGTATGATATAAAGCTGTGGCTGAAAAGTCACACAGTCACCTGGAGGGTGGACCGAACATATCCAAGAAAGGGCCAGAAAGTACTTTTCAAGGTGGACTTCAGATGCCAACGCAATACGAGACCTCGCAATGAAAACGCGGCAGGCAGAAGAAGCCAGATTACAAACTGCTCTGCTAAGATGACTGTGACACTACTACGCACTCAAGTGAGCAGAGGCAGGCAGAGTCTAAGCAAGGACCCTCACGTGCCTACCTTCCCCACAATCGTGTCCATCTGCAGTGACCACAACCACAACGTCTATGTGGCTGATGCACTGAGCCACTGTGATGTTGGGGATGATACAAAAGCTAAACTGAACAAGCTTTTTGAAGCAGGACGCTGCCCAAGTTCAGCCTTAGATGAGCTGAAGTACGATCTATCCCCGCAGACCCTATCTTGCCAATCCCCCTCTTTATCACATCAAGATGCTGCAGCAGGATTTGCTGAAATGTGCCAGGAGCTGTCAGCCATGGTCAACAGCGACGCATCTTTTACAGCCTCCTCAATAGCTGCAGTAAAGgcctttaaaacaataaaagacgATCCGTCAAAGATCATGACAGCCTTACATATGTTTGGCCGCTCAAAAAACACCAGCTTGGCATCTGTAAGAACTGGAGCCATCCGTAGGGCAGCCAGGCATGCTGGCCCTACTATTCATGCACAACCAACAGCAGTGGCGAGACGTCCTGCCAAGGTAACGGCAGGACATGACCATGTttacagccagccagccagtcaAGAGGGTCCGAACACAAGCTCCCCATTATCCGGCGCACTCTGGGTCGGAGCGCAAAAGCCACCCAGAATGAAAGAATGAATTGCCAATCTGTCATCtttctaaaacacacacacacacacacacacacacacacacacacacacacacacacagtttgtttGTATTTGGCTTCTTTATTAAACACTTTTAATGTGTTTAGTGTTTAAGTCTCAATTGTTTCTTCTCACCcagattaaaggtgcagtaagtgatGCTGCACAAAGATTGTTggtatttgaactcaactggcAAACAAATACACCTCTCACATCCAGAAAACAGTGTGGAAAGTGGGGACAGTAATGTAATCCGACAATGTTTTTATGGTTTATGAATTGGTTGTTGGTAGGCTTTTGCCTGGGAACCTATTTAAGAAGCTACTGCACTGCTGTCCTATttgaactgtgtttttttttagcagacTGGTCTGGGCAGAGGGCACACATGAGTGGAAGATCACAGAGGCTAAGACTGACGCTAGCTACGTTTGAATTGATTGCACAGATTATAAAGCTGTAATGTTTTTGAATTTAGAGTTAATTGCAGTAAGTGGGTTTTGAGAGTGTGAAATGTGTACTTTCCTCCATAAGTAAAGATTCCTGTGTTTGATAACTTA
>XM_039795211.1
GCGAATAAAACAGCGTAGACAAGAGCTTTTCGCGGTAACGTAGCTATCGCGTTAATATGGCTATTGACCATCAAAGGGTCGCCTAAATATGACGTCGCTACACGACCTTTTTAAAATGGATGCTAGAAGGCATCGATGTCGTTATAGCATCATGTCTCAGACTCTCAGTAAAGGAAAACGATTTGCCTGCATCAACCCCAAGCAGAACATTTCTGACTTCCCTGCTTTGAAGGTGGACTTCAGATGCCAACGCAATACGAGACCTCGCAATGAAAACGCGGCAGGCAGAAGAAGCCAGATTACAAACTGCTCTGCTAAGATGACTGTGACACTACTACGCACTCAAGTGAGCAGAGGCAGGCAGAGTCTAAGCAAGGACCCTCACGTGCCTACCTTCCCCACAATCGTGTCCATCTGCAGTGACCACAACCACAACGTCTATGTGGCTGATGCACTGAGCCACTGTGATGTTGGGGATGATACAAAAGCTAAACTGAACAAGCTTTTTGAAGCAGGACGCTGCCCAAGTTCAGCCTTAGATGAGCTGAAGTACGATCTATCCCCGCAGACCCTATCTTGCCAATCCCCCTCTTTATCACATCAAGATGCTGCAGCAGGATTTGCTGAAATGTGCCAGGAGCTGTCAGCCATGGTCAACAGCGACGCATCTTTTACAGCCTCCTCAATAGCTGCAGTAAAGgcctttaaaacaataaaagacgATCCGTCAAAGATCATGACAGCCTTACATATGTTTGGCCGCTCAAAAAACACCAGCTTGGCATCTGTAAGAACTGGAGCCATCCGTAGGGCAGCCAGGCATGCTGGCCCTACTATTCATGCACAACCAACAGCAGTGGCGAGACGTCCTGCCAAGGTAACGGCAGGACATGACCATGTttacagccagccagccagtcaAGAGGGTCCGAACACAAGCTCCCCATTATCCGGCGCACTCTGGGTCGGAGCGCAAAAGCCACCCAGAATGAAAGAATGAATTGCCAATCTGTCATCtttctaaaacacacacacacacacacacacacacacacacacacacacacacacacagtttgtttGTATTTGGCTTCTTTATTAAACACTTTTAATGTGTTTAGTGTTTAAGTCTCAATTGTTTCTTCTCACCcagattaaaggtgcagtaagtgatGCTGCACAAAGATTGTTggtatttgaactcaactggcAAACAAATACACCTCTCACATCCAGAAAACAGTGTGGAAAGTGGGGACAGTAATGTAATCCGACAATGTTTTTATGGTTTATGAATTGGTTGTTGGTAGGCTTTTGCCTGGGAACCTATTTAAGAAGCTACTGCACTGCTGTCCTATttgaactgtgtttttttttagcagacTGGTCTGGGCAGAGGGCACACATGAGTGGAAGATCACAGAGGCTAAGACTGACGCTAGCTACGTTTGAATTGATTGCACAGATTATAAAGCTGTAATGTTTTTGAATTTAGAGTTAATTGCAGTAAGTGGGTTTTGAGAGTGTGAAATGTGTACTTTCCTCCATAAGTAAAGATTCCTGTGTTTGATAACTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795205.1 True 1778 mRNA 0.45 6 35688489 35691028
XM_039795211.1 False 1577 mRNA 0.45 5 35688489 35691028

Neighbor

gene id symbol gene type direction distance location
prdx2 prdx2,LOC106526939 coding downstream 59597 35623904 ~ 35628892 (-)
grk4 grk4 coding downstream 146406 35493057 ~ 35542083 (-)
htt htt coding downstream 196130 35456939 ~ 35492359 (-)
LOC120569607 NA coding downstream 211129 35477231 ~ 35477360 (-)
dok7b LOC103354519,LOC104946983,LOC107393269,LOC102790269 coding downstream 289971 35372017 ~ 35398518 (-)
LOC120564231 LOC103355955,LOC104967895 coding upstream 41940 35732968 ~ 35739670 (-)
nfil3-5 NA coding upstream 124744 35815772 ~ 35825168 (-)
LOC120563277 NA coding upstream 137727 35828755 ~ 35831299 (-)
klf1 LOC106569090,LOC105898955,LOC107700996,LOC107559026 coding upstream 153259 35844287 ~ 35848461 (-)
LOC120566690 ddx17,LOC105012177 coding upstream 293218 35984246 ~ 35993088 (-)
G10091 NA non-coding downstream 36318 35651972 ~ 35652171 (-)
G10063 NA non-coding downstream 115045 35562913 ~ 35573444 (-)
G10061 NA non-coding downstream 130331 35557548 ~ 35558158 (-)
G9993 NA non-coding downstream 283840 35403414 ~ 35404649 (-)
G9967 NA non-coding downstream 416437 35263045 ~ 35272052 (-)
G10143 NA non-coding upstream 7604 35698632 ~ 35702592 (-)
G10174 NA non-coding upstream 108593 35799621 ~ 35843137 (-)
G10198 NA non-coding upstream 229827 35920855 ~ 35921076 (-)
G10200 NA non-coding upstream 237721 35928749 ~ 35929260 (-)
G10202 NA non-coding upstream 240571 35931599 ~ 35931855 (-)
LOC120572869 NA other downstream 101876 35584470 ~ 35586613 (-)
rgs12b rgs12,LOC104946104 other downstream 237278 35404815 ~ 35451211 (-)
G9997 NA other downstream 288015 35398640 ~ 35400474 (-)
G9740 NA other downstream 1230854 34452850 ~ 34457635 (-)
stox2a stox2,LOC100702551,LOC102293991,LOC101478850,LOC102775740 other downstream 2162974 33497102 ~ 33525515 (-)
micall1a LOC100693188 other upstream 253020 35944048 ~ 35969266 (-)
slc5a10 slc5a10,LOC102791530,LOC103460715 other upstream 542179 36233207 ~ 36256880 (-)
LOC120547992 NA other upstream 585826 36276854 ~ 36280814 (-)
LOC120561459 LOC103359169,LOC107395760 other upstream 638753 36329781 ~ 36337148 (-)
LOC120560464 kcnq5,LOC100711684,LOC102297355 other upstream 833243 36524271 ~ 36718918 (-)

Expression


Co-expression Network