LOC120556225


Basic Information

Item Value
gene id LOC120556225
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 16946866 ~ 16957332 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795714.1
ttacacacaaacacacacacacacacacactgaaccgAGTTTGAATAAACCATGCCAAAGATAAATGCGGAGCACTGTAATGAAGAATCTGCACACTCTTAATTTGCTGCCAATTTTGGcccTGGCGAGTTTGTTCATCAAGATAAGTGGATCGATCTCTCTTCGCCCAGTGCTGACTGGTCCTGACATGGCCTACCTCAGCTCGAGGGTGGTTTTCCAGTGTATTGCACCAGACTCCTCTCTGCCAGTCACCTATGAGCTGATGGGGGACGGTGGTGTCCTGATTGACACGGTTGCTGATCTCCAAGGTGACCAACCTGCCTCATTCAACCTTAAGGTCACTGCATCATCGGAGGGGTCATACCACTGCAAGGCGACGACAGGAAGAAGCACGGGAGTCAGCGACAGCATCAACCTGAGTGTAGTCACTCCACCATCAAACACCAGAGTGACTTCTGAACCCTTTCCTCCCGTCGCATATGAGGGGTCACGTGTCGTTCTGAGCTGCAGCGTCACAAAAGGCTCCCACCTTTCCTACACCTGGTTTTTCAACAGGAAGGCAGTAACATCTTTAACCTCTCCCCTCCTTCTCCTCACTGCGAACAAACTAGTGATGAGCAATGTGGCTCCAGAGCATGCTGGGTACTATTCTTGCATAGCTTGGTCCAGGGCGCAGGACACCAGGTTTTCCAGCAGCTCAGAGGTCCAGGTGACGGTCAAAGTCTACGTTTCCAAACCAAGAATCTCTTTCTACATCTCTAAAGAGGGAGCCAGTCATCGTGGCAACGTGACCTGCTGGTCAACAAGAGGGAGTCCTCCAGTCAACATCTCTCTTTTACTAGATGACAAAGAAGTGGGATCTGTCACAGCTACTGAATCCCTCGCTGCCTGGTTCCCTGTCGCCATGGAACCCGGGCTGGACATGGGCGTGGCTCGGTGTCGGCTGACTACTGAGGTTCAGGAGTTGATGAGTGAGCCTGTGACTCTGGAAGTGGTCCCAGTCGGAGGTGATGTGAAAGTGGAGGTTGAATATCTCTACAGAGCTGACTCCAAAATGGTCGCCGCCATGTTGAGCTGTCAAATCAGCAGAGGAACTTTCCCTTATGTCTCCTGGCTCTTGAACGACTCTGTCCTTCCCTCTGAGACACATGAGGACTCCCATATTCAGCCTGTCCTGTCTCACTATGCCCTAACGGACCGTAGACGAACCCTTGTTCTGGCCAAGCTCAGCCCAGAGGAGTCTGGGTATTACCGCTGCAGGTCCAGGGACAGCTACGATGACTCCGGGCCCTGGGTGGAGAGTGCAGCCGTGCTGGTCCGAGTCACAGACTGCAACCTTTGCTCCATGCCTCGAGCAACGTCTACCACTGAAACACCACCAAAGGTTTTCATGAACACCATAGAGGTCATTAGCATAGCCTTCTGCTGCCTCCTTCTTCTAATGTTGGCAGTGGGTGTAGGCTGTGTGTGCAAGATGTTTGACGACaagcaagGCCATGCCCACATTGCTACAACAAATCCCACGCCTGATGCACTTCCTCTGTCTGCACTCATGTCCCAGTCAGGAGGCGAACAGGACGATACAGACTGGGATTCTTGTAACACTATCAGCTATTTGCACATGtttcttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttactgtttacactgAAAGTGCTTCAAACCGCCATTCAAAACTGTCAAAACTCCTGCAATACACAGAGTAGTGTAGTCACATTTGAAGTATACAGTTGCATTAAAGACAATAATTCTTCTTCGAGAATGTTTACTTCCTTTCCCTTTGTGGTCGTACTGGTGTTGTGCTACTGTAACAAGGAAAGCAGTCAGTCAATTCTGGGGCGTCCACAACTGTTTGGCCCTTCGGAGGCTTTGGTGAAAAGCGTTGCAGAGTTTCAGTGTGAACTGAATATCTACCCAGAGAATGAAACTATCCTGTTTCAGTTATTTAAGGAGAAGAACCGTGACAAGATTTTGGGTGAATACACCTCCCTGGATGGGGAGAATGCAGTCTTCTTCATGGTAATCAGACCTAAGCATGAGGGAAACCTGGAGTGTTTGGCCAAGGGACAGAACAACTCTAACATAGAGCCCACTGTCAGCTACACACACTACCTGAAGGTAGTTGAACCAGTGAATGGTGCAGAGATCATCGTCCGTTCAGGTCCAGTGGAGTTCTTTGAGGGGAagacactggagctacactgtGCTCTTACTGCTGGAAATCATGTCTCTTACAAGTGGCTGCTAAATGGACGGCTTGTCTCTCCGTCTCGTCGCCACTATGTTGCAGATGGCCGTCTCTTAATCAACAGAACTACTTCTAAAGACAGCGGCTCCTACAAGTGTGTTGCCACCAATCACTTCAACAAAACAGTCTTCACCTCCAACAGCTCTGAAGTTGTAATCACAGTCAAAGACGCTGTGTCAACCCCTGACATCTCCTTCACTGTGTTAAAGCAAGATCCCCAAAGCTATTCTGCCATGGTCACCTGTCAGTCAGCCAAAGGGACTCCGCCTGTCACCTTTTCACTATACAACAGGACAGAATTGGTTTCCTCTACGACAGTTGAAGAGACAAACGCCACATTTAAGGTTCCATTGGTCTTGGGCCAGCACTTGGGATGGCTCCAGTGCCAAGCAAACAATAGTGAACAGATCGAATTCAGTCAAATGATTCCCCTAGAAGTTGTCCCGGTTGGTGGGCCCGTGATGATGCATTACGACAATGACGTTGGAGAAAACCACGCTGTGATCGGCCTGAGGTTCTACTGCAAGGCGGCAAAGGGATCTCTTCCTCGGTACCAGTGGTTCCTCAACAACACCCTACTACATGACCGAGGAAGATTCTTTTACGTGGTCAACCAGCCTTCAGAACAGTCTATACTCCTGCTGTCTGTAGGGAGGAGCAGCGCTGGAACGTACCACTGTGAAGTGTCAGACAGCTTTGACAACACCACCGCCATACGCAGTAAGAGGCTGTATTTGGATAGAGAAGTGCTGAATCGTCTCCCTGTCTGGGTGGTGGCAATTGTCTTTGGATGTTTCGCAGCACTGATTCTCCTGGTCTCCATCTGTTGTTTGGTTGGAGCAATGTTCAGGCGAAGGCAGTATGGAGAGAAGTCTCTGAGCTTGGAGATGGACGGAAGGGTAGCTGTATATGAGGGCGAGCTGGATCCGTCAGAGTATCATGAGGATGATGATGTGGTGAACACAGCCAGAGCTGGTGAATTTGATCAGgTATCTGAAGCCTCCGTAGATGAATGGCCCAAAATTAAGGCCTGCCTGAAAGAAGTAGAGGACCTGACCTGCTGGGGTCAGGACAACAACAACCTACTTATAAATGTCACTCAGCAAGACTAAAGAGATGATAGTTGTTTGGGAAGAAttcgattctgattccaattccgattcatCCTTTCGATttcggttcttatcgattctcgattccgattctttgagggtggagttgaaatgggTCACATGCTTAGTTCACAAATacgaggaaagttttatttgattcaatggtggtttgcagttttacagctttttcactgtaaaataaagccacgccAGAGCGccacttactgtgctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795714.1 True 3620 mRNA 0.49 23 16946866 16957332

Neighbor

gene id symbol gene type direction distance location
syngr2b syngr2,LOC107090770 coding downstream 1004 16936801 ~ 16945862 (-)
afmid afmid,LOC102792082 coding downstream 22268 16907096 ~ 16924598 (-)
cant1b LOC104922273,LOC104950180 coding downstream 42198 16895705 ~ 16904668 (-)
ldb1b ldb1,LOC104963201,LOC108444470,LOC104922276,LOC103353370,LOC103150493,LOC100706951,LOC108270891,LOC101479469,LOC107090769,LOC106518772 coding downstream 73376 16843787 ~ 16873490 (-)
armh3 lg6h10orf76,cunh10orf76 coding downstream 107144 16815833 ~ 16839722 (-)
tmc8 LOC103356194 coding upstream 280 16957612 ~ 16966225 (-)
notum1b notum,LOC103356199,LOC102201337,LOC102290801,LOC107090768 coding upstream 28062 16985394 ~ 16995641 (-)
npb npb coding upstream 195590 17152922 ~ 17154504 (-)
sgsh sgsh coding upstream 198399 17155731 ~ 17161156 (-)
LOC120559819 NA coding upstream 289217 17246549 ~ 17256447 (-)
LOC120568012 NA non-coding downstream 26140 16917074 ~ 16920726 (-)
G5140 LOC103362533 non-coding downstream 103863 16762368 ~ 16843003 (-)
G5125 LOC103362543,LOC101066958,LOC101475774,LOC104921624,LOC102209940,LOC103384338 non-coding downstream 295340 16649045 ~ 16651526 (-)
G5079 mettl26 non-coding downstream 594398 16350067 ~ 16352468 (-)
G5081 NA non-coding downstream 596883 16348266 ~ 16349983 (-)
G5202 NA non-coding upstream 10577 16967909 ~ 16972243 (-)
G5242 NA non-coding upstream 94296 17051628 ~ 17051857 (-)
G5261 NA non-coding upstream 102829 17060161 ~ 17060543 (-)
G5264 NA non-coding upstream 104578 17061910 ~ 17062119 (-)
G5265 NA non-coding upstream 105736 17063068 ~ 17065526 (-)
LOC120558720 NA other downstream 598944 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 1261227 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2042637 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 2227764 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 2904356 14018902 ~ 14042510 (-)
LOC120569099 NA other upstream 454721 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 753307 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 860175 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 878572 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 922536 17879868 ~ 17881759 (-)

Expression


Co-expression Network