LOC120556266 (LOC103353763,LOC100700287)


Basic Information

Item Value
gene id LOC120556266
gene name LOC103353763,LOC100700287
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 24066928 ~ 24068828 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039795744.1
gaggagacagagtAGGAACATATAAAAGCGGGGAGAAGACTGTAGGCACACAGAGCACAAACCGTACTGCACATCCAGCGAGAAAACAGTGAATCACTGTGAACATAGATCAAGCTACCTAACTACCAAACCTTCAGAACTTTATCCTAACTGGGCTGCAATGGAGCCAGAGAAGAAGACTCAGACAACATCAGAGCAGATGACTGACAGggatctgtcagaacaaataaaaaaggtgacaaaggATAGTCACGTCAGGGCAGAAAACACCGAACTGATGCTGAGCTTCCAGAAGGGAAAAGTCACTCTGCCACAGTACaagCTCCTTCTGTGCTCGCTGTATGAGGTCTACCAGGCCTTGGAGGAAGAGATGGACAGGAACTCTAACCACCCCAGTGTTGCACCCATTTACTTCCCAGCCGAACTAGCCAGACTGGAGGCCATCGAGAAAGACCTGGAATACTTCTATGGCCAGGACTGGAGAGAGAAGATTGTTGTCCCTGCAGCTACTAAAAGATACTGCCACAGACTCAGACAAATTGGTAAAGAAAACCCAGAATTTTTGGTTGCCCATGCTTACACTAGGTACCTAGGTGACCTGTCTGGAGGGCAGGTCCTGGGTCGAATCGCCCAGAAGTCCATGGGGCTAAAGGGCAGCGAAGGTCTGTCATTCTTCGCCTTCCCCGGTGTGTCCAGCCCCAACCTGTTCAAACAGCTGTATCGCAGCCGGATGAACAGCGTGGAGCTgacggaggaggagaggaacgGCGTGCTGGAGGAGGCTGTCAGAGCGTTTGAGTTAAACATTCAGGTCTTTGAGGGTTTGCAGATGTTGGCGAGTGTCACTGAAAACGAGCTAAAGACATGTTCAACACACTCCACACCAGTAAATACACTCCAGATCCCCAGAGCCATCATCAAAACTACCCCACTGCTCAGGATGGTGCTCGGACTTTTTGTGGCTCTGGTCACAGTCAGTGTGGGAATCTATGCTTTTTAGAAAAGATatacgaaaaaaaaaa

Function

NR:

description
PREDICTED: heme oxygenase-like

GO: NA

KEGG:

id description
K00510 HMOX1; heme oxygenase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039795744.1 True 1022 mRNA 0.49 6 24066928 24068828

Neighbor

gene id symbol gene type direction distance location
rab11fip4b rab11fip4,LOC102782519 coding downstream 381489 23657337 ~ 23685439 (-)
LOC120555782 NA coding downstream 410672 23650623 ~ 23656256 (-)
suz12b suz12 coding downstream 510678 23543467 ~ 23556250 (-)
atad5b NA coding downstream 524967 23535582 ~ 23541961 (-)
LOC120562252 adap2,LOC102784227 coding downstream 534886 23525332 ~ 23532042 (-)
lyl1 LOC105910150 coding upstream 22839 24091667 ~ 24096223 (-)
LOC120569492 NA coding upstream 65069 24133897 ~ 24135669 (-)
zglp1 zglp1 coding upstream 68560 24137388 ~ 24145207 (-)
fdx2 fdx1l,LOC104950501 coding upstream 76574 24145402 ~ 24149825 (-)
cdkn2d cdkn2d,LOC102798019 coding upstream 145865 24214693 ~ 24217245 (-)
LOC120556287 NA non-coding downstream 7084 24056501 ~ 24059844 (-)
G7141 NA non-coding downstream 11168 24015459 ~ 24055760 (-)
LOC120556236 NA non-coding downstream 123355 23937409 ~ 23943573 (-)
G7069 NA non-coding downstream 482406 23584200 ~ 23584522 (-)
G7067 NA non-coding downstream 489799 23576928 ~ 23577129 (-)
G7179 NA non-coding upstream 13685 24082513 ~ 24084276 (-)
LOC120567450 NA non-coding upstream 27864 24096692 ~ 24099093 (-)
G7292 NA non-coding upstream 376352 24445180 ~ 24449314 (-)
G7324 NA non-coding upstream 467552 24536380 ~ 24539504 (-)
G7325 NA non-coding upstream 471136 24539964 ~ 24541406 (-)
LOC120562828 elof1,LOC103353603,LOC103384163,LOC100701647,LOC101173766 other downstream 181166 23882745 ~ 23885762 (-)
palm3 NA other downstream 255907 23772856 ~ 23811021 (-)
G7071 NA other downstream 298087 23752026 ~ 23768841 (-)
si:ch211-207j7.2 NA other downstream 320897 23734364 ~ 23746031 (-)
LOC120557242 NA other downstream 346178 23711827 ~ 23720750 (-)
G7323 NA other upstream 463408 24532236 ~ 24535316 (-)
si:ch211-243a20.3 si:ch211-243a20.3,LOC107676841,LOC107712233,LOC105901553 other upstream 596557 24665385 ~ 24669297 (-)
LOC120543531 pde6h,LOC101074909,LOC104944980,LOC103354149,LOC107382209,LOC103383788,LOC101158417,LOC106533555 other upstream 687104 24755932 ~ 24759618 (-)
G7589 NA other upstream 1629433 25698261 ~ 25699557 (-)
G7603 LOC103353181 other upstream 1715116 25783944 ~ 25788229 (-)

Expression


Co-expression Network