LOC120556520


Basic Information

Item Value
gene id LOC120556520
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 22266418 ~ 22273082 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796166.1
CACTGTAGTTTGTAGCAAATGTTACTCGAACAGgaggaaatagtgcatttgttgggaactattttcagcagtggattaatacacatttagcTCGAAGCTGCAGTGCCCATGTtcataatgaaggaacatgtcggTGGAGTGATGCGGCTCATTTGTGTGGGTTTTATAGTTTCTCATCTTTTAACACAACTTTTCACACCCCCACTTCTCTTTCTCATTAATGTGCAATGCTTTTTCTATGAATACTATGGAAGGGAATCTGCTGTTGCATCAGAAAGCTTCTTTTAAAATTGACCTCAGTGGTTATTTTGTAACCTGACTGTGTCAACATGTGTGTCAACACTTTCTGAAGAATTTTCAGCATAGTCTTTCTTCCTCTCGCTTCGACAGATGTCTTCCCTAGATTAATCTGACGCTCAGTTTAATGCACCACTGCCACATATCCATCCATAACTTGCACCcaaagtgtttttgttgtgttttctgaacTAGAGCTGGACAGATTATGTGCTGCTGTGAGCATGCAGTGTTTGGGGTTTGTATGTGAGGAAGCAGTGTGGTTGTCGGCTCAGAGGTGTCTGAGCTGAAACACTTCCTCGTCTGTTTCTACTGTCATCTCACGACCTGCAGAGAACATCAACGGCTCACAATCCAGGCTGACTCGACATTGTCTCATAAGACTTTTTTTCCCAGTTAAATTCTTATTGTGAAGTTTGTGTGTGACGTTAAGAAGAACTGGTGGAATGTAAAAATCTGATAACTTTGATTTCAGGTGTAGAGCAGATCTTCCTCCCTTTTGAGTGATGCCTCGTTCTTTCTTGGTGAAGCGAGGAGGGCTGCACCACCTAGGAAAAAAGACTGGGTCCAGGAATACGTCCATGCAGTACTCCACATCAGAAACACAAGATAATGATGCAGTAGCCATCACATTACTGCAGCAGGACCTTCCTGCTGACTGCCACTCTAATGGAAGTAATCACCTTCAGCCATTCAGTCCCAAATCTTATGACTGTAGATCTGCTGGGCCCTGCAGTCCTGTCAACTCAAATACTTTAAGCCCAGTGGAGAAAGACGAGTCTCGGCCTCCCACACCAGCTGTATGGTCCAGGCCTCATGTGAGCTCAGAATATCGAGACAAACTGTCTGTGGGACTGGGAGATTTGACTCAGCACCCTCACATCCTGAGGGAGATCAGGAGCAGTGGCTGCTTGAAGATCAGTGCTCCGAGGCAAGAGTGTCCACTCTGTAGCAAAGTATTTTCATGTTTGTCAAGTTTGAAGACTCACATATGCAAGAGTCACGGAAGCAGAGCACCAGCACACAGCAAGTCCAGCAGGACAGACACTGAGCAGTCATCGTGCAGGGGCAAGGAGAGGACATTTGGCTGTACAGTGTGTGGAAAAGTGTTCAAGCGCTCCTCCACCCTCACTACTCATCTGCTCATACATTCAGACACCCGTCCCTACCCCTGCCAGTACTGTGGCAAAAGGTTCCACCAGAAGTCtgacatgaaaaaacacacctTCATACACACCGGCGAGAAGCCCCATGTGTGTCAGATATGTGGGAAGGCATTCAGCCAGAGCTCCAACCTCATCACCCACAGCCGTAAACACAGGGACGACCGGCCCTACCGCTGTCCTCGCTGCCTCTACAGCTTCCAGCACAAAGTGGACCTTAGGCAGCACCAGGACCACCACTGCACCTACCGCTGATCGCCAAGTCAACATcgtagcctttttttttttttttataaccagCGGAAACACATTCAGGACAGAAAGCTACTGAGTGTGTTGACTACTTTTTCCCAGTAtgtaaaatacagttttttatttatatacaagAAATTCACTATTATTTGTTAACATCATGTTTACAGCGAGAGAAAGTAATtgccccttgtgggattaataaagttgtATTGAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796166.1 True 1933 mRNA 0.45 6 22266418 22273082

Neighbor

gene id symbol gene type direction distance location
LOC120556437 mcoln1 coding downstream 27558 22216256 ~ 22238860 (-)
si:ch211-214c7.4 LOC107102761 coding downstream 56688 22182683 ~ 22209730 (-)
pkn1a pkn1,LOC103364445,LOC108242730,LOC107382353,LOC103383564 coding downstream 94744 22115116 ~ 22171674 (-)
map2k7 map2k7 coding downstream 154611 22095960 ~ 22111807 (-)
LOC120565705 NA coding downstream 180946 22053010 ~ 22085472 (-)
evi5l evi5l,LOC100697259 coding upstream 2584 22275666 ~ 22320547 (-)
LOC120562917 LOC103354903 coding upstream 139518 22412600 ~ 22538510 (-)
LOC120558725 LOC103354901,LOC103383579 coding upstream 346588 22619670 ~ 22634940 (-)
si:dkey-45d16.4 LOC104950130 coding upstream 362802 22635884 ~ 22641744 (-)
LOC120558762 LOC108242699,LOC106536899,LOC103354898,LOC100703987,LOC103383580 coding upstream 381099 22654181 ~ 22665213 (-)
G6764 NA non-coding downstream 426 22264384 ~ 22265992 (-)
G6731 NA non-coding downstream 174861 22090500 ~ 22091557 (-)
LOC120568056 NA non-coding downstream 225487 22035285 ~ 22040931 (-)
LOC120569580 NA non-coding downstream 227267 22039009 ~ 22039151 (-)
G6654 NA non-coding downstream 289270 21968847 ~ 21977148 (-)
G6762 ddx39a,LOC103150096 non-coding upstream 51468 22324550 ~ 22325383 (-)
LOC120562974 NA non-coding upstream 328306 22601388 ~ 22603953 (-)
G6834 NA non-coding upstream 378450 22651532 ~ 22653786 (-)
G6879 NA non-coding upstream 651749 22924831 ~ 22933891 (-)
G6880 usp43 non-coding upstream 699800 22972882 ~ 22973326 (-)
G6592 ube2o,LOC106534564 other downstream 556606 21708540 ~ 21709812 (-)
LOC120566957 NA other downstream 697359 21563091 ~ 21569059 (-)
LOC120574674 NA other downstream 2073080 20187281 ~ 20193338 (-)
spink4 NA other downstream 2221692 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 2469896 19766497 ~ 19796522 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 55437 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 392293 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 708843 22981925 ~ 22988500 (-)
G6924 NA other upstream 815418 23088500 ~ 23164937 (-)
G6943 NA other upstream 940774 23213856 ~ 23242290 (-)

Expression


Co-expression Network