LOC120557121


Basic Information

Item Value
gene id LOC120557121
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 26425091 ~ 26435787 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797155.1
CTTGCTGCATTGTCGCCTGCCTCTGCTAGAATTATAAGTAATATCGAATCAGGCTTCTTAGACTCTACCAAAGGCTTCTCTGGTGTAGGGTGTGAATGAATGTTTGTTCTAAATTCTAGAAAGGGAAGCAGATACCACAGGCTACAAGTCATGCCTGTGTTGGCgtgaagaagtgtgtgtgtgtgtgtatgagtgtctgtatgtgtgtggcagATCTTATGGTGCAACCATGACAAGAGCAGCACTGACTAAACTCCTCATCCTCGTGATCCTCGCCTTCATCATCTGCCTCCCAGAATTCTTCACATTGTACAGAGtaTCAAAAGTGAACTTCCTTTGCCTGTCCTACCGACCCTGTGAGCAAGATAATCCGATTAAGGAGGGGGAAAATGGGAAGATTGGGGATGCTGAAATTAGGAGAAAGAATATGTGTGACCCTTCACAGACTCCAGAAAGTGAAAAGTGGGAGCAGGACTGCATGGAGGAGCATCAAAGCAACACGACAGATCCTGAGTTAGACTCCAGCAGAGGAGGCGAAGACCCAGAAAAGAGCTGGTTCATGTGTAAAACAGATGTGAACATAGCAGAATTACAAAGCAACACCTCATCTTCAGTTCTAAAAGTACATTTCGAGGTGTCGGTGGAGCTTCAACTTAGAGATGCAGAGACCCTGAGTctcaccttgtacggcagcagTAATCACAGCTCCTTACACCTCCACTCacctgaggaggagaaggaggaggaggaggaggaggatgacgaAGGACAGAGGAAGGCCTTTTACTGCTGTCTGCCTGTCCTGCCCACCTCAGAATCAGCCAATCAAAGCCGCTGTCTCCTTTGGCTCGCCAATCAAACACTTTTGACTGAAACAGCAAAGAAAAAGCTGCCATGGAAACGGACACAGAAAGATGAGTGGCAGTGTGTGTTCAGGGTGCTCTGGCTGGCTCTGCTGTGTGTAGTGATGCTGACTATTTTCACAACTGTGTTTGGACAAATCTACTGGAAGAGACGCTCATGCAAAAATCCTAAGGTGCACCCTGTTGGTTACGACATCACTGGACAGCAGTTGAACGATGGTGAGCACACCGAGATCATTATTCCCAAAGGGATGATCCTTCACTCTTATGGGTCCCGACCTAAATCAGgactgACACCCATTCAAGAAGTTGACGCTCAAGATGAAATAGAAACTCTGCTGGATGGAAATGTCGACCACTGCTATACAGCAAATCATCTGCATCATCGCATCCATCCCTCCACTTCCTCCCTCACAGAGGAACAGGCCTGGTGACAGAGGAGCAGCCAGAGGAGCAAACAAATGGACTTAAAAGAGCACTCGATAAAAATCAAAAATGACCGCTTCAATTACCAGCCACCtttatggtgaaaataaaaacatctgtgACACATGAA
>XM_039797161.1
GCTGCATTGTCGCCTGCCTCTGCTAGAATTATAAGTAATATCGAATCAGGCTTCTTAGACTCTACCAAAGGCTTCTCTGGTGTAGGGTGTGAATGAATGTTTGTTCTAAATTCTAGAAAGGGAAGCAGATACCACAGGCTACAAGTCATGCCTGTGTTGGCgtgaagaagtgtgtgtgtgtgtgtatgagtgtctgtatgtgtgtggcagATCTTATGGTGCAACCATGACAAGAGCAGCACTGACTAAACTCCTCATCCTCGTGATCCTCGCCTTCATCATCTGCCTCCCAGAATTCTTCACATTGTACAGAGACTCCAGAAAGTGAAAAGTGGGAGCAGGACTGCATGGAGGAGCATCAAAGCAACACGACAGATCCTGAGTTAGACTCCAGCAGAGGAGGCGAAGACCCAGAAAAGAGCTGGTTCATGTGTAAAACAGATGTGAACATAGCAGAATTACAAAGCAACACCTCATCTTCAGTTCTAAAAGTACATTTCGAGGTGTCGGTGGAGCTTCAACTTAGAGATGCAGAGACCCTGAGTctcaccttgtacggcagcagTAATCACAGCTCCTTACACCTCCACTCacctgaggaggagaaggaggaggaggaggaggaggatgacgaAGGACAGAGGAAGGCCTTTTACTGCTGTCTGCCTGTCCTGCCCACCTCAGAATCAGCCAATCAAAGCCGCTGTCTCCTTTGGCTCGCCAATCAAACACTTTTGACTGAAACAGCAAAGAAAAAGCTGCCATGGAAACGGACACAGAAAGATGAGTGGCAGTGTGTGTTCAGGGTGCTCTGGCTGGCTCTGCTGTGTGTAGTGATGCTGACTATTTTCACAACTGTGTTTGGACAAATCTACTGGAAGAGACGCTCATGCAAAAATCCTAAGGTGCACCCTGTTGGTTACGACATCACTGGACAGCAGTTGAACGATGGTGAGCACACCGAGATCATTATTCCCAAAGGGATGATCCTTCACTCTTATGGGTCCCGACCTAAATCAGgactgACACCCATTCAAGAAGTTGACGCTCAAGATGAAATAGAAACTCTGCTGGATGGAAATGTCGACCACTGCTATACAGCAAATCATCTGCATCATCGCATCCATCCCTCCACTTCCTCCCTCACAGAGGAACAGGCCTGGTGACAGAGGAGCAGCCAGAGGAGCAAACAAATGGACTTAAAAGAGCACTCGATAAAAATCAAAAATGACCGCTTCAATTACCAGCCACCtttatggtgaaaataaaaacatctgtgACACATGAA

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797155.1 True 1419 mRNA 0.47 10 26425091 26435787
XM_039797161.1 False 1288 mRNA 0.47 10 26425091 26435784

Neighbor

gene id symbol gene type direction distance location
trnap-agg NA coding downstream 12728 26412292 ~ 26412363 (-)
pax5 pax5 coding downstream 188559 26153490 ~ 26236532 (-)
polr1e polr1e coding downstream 390669 26029630 ~ 26034422 (-)
LOC120560668 LOC103354873 coding downstream 415866 26007901 ~ 26009225 (-)
LOC120560669 LOC103354873 coding downstream 421820 26001504 ~ 26003271 (-)
rfc1 rfc1 coding upstream 83691 26519478 ~ 26533118 (-)
rpl9 rpl9 coding upstream 103517 26539304 ~ 26546556 (-)
ugdh ugdh coding upstream 118247 26554034 ~ 26559727 (-)
map9 NA coding upstream 124599 26560386 ~ 26566438 (-)
pds5a pds5a,LOC102784517 coding upstream 150722 26586509 ~ 26620024 (-)
G7883 NA non-coding downstream 13784 26307863 ~ 26411307 (-)
G7871 NA non-coding downstream 123414 26245341 ~ 26301677 (-)
LOC120559970 NA non-coding downstream 234205 26190299 ~ 26190886 (-)
LOC120559965 NA non-coding downstream 234788 26189900 ~ 26190303 (-)
LOC120559960 NA non-coding downstream 235205 26188761 ~ 26189886 (-)
G7917 NA non-coding upstream 12820 26448607 ~ 26448986 (-)
G7918 NA non-coding upstream 19790 26455577 ~ 26455783 (-)
G7921 NA non-coding upstream 57115 26492902 ~ 26495765 (-)
G7936 lias non-coding upstream 114925 26550712 ~ 26551906 (-)
G7948 NA non-coding upstream 193994 26629781 ~ 26637840 (-)
adamtsl7 NA other downstream 303442 26112014 ~ 26121649 (-)
polq LOC104947247,LOC104947243,LOC106593755 other downstream 330847 26075397 ~ 26094244 (-)
G7722 LOC103354873 other downstream 415874 26001524 ~ 26009217 (-)
G7603 LOC103353181 other downstream 636862 25783944 ~ 25788229 (-)
G7589 NA other downstream 725534 25698261 ~ 25699557 (-)
LOC120566984 NA other upstream 98046 26533833 ~ 26535736 (-)
smim14 smim14 other upstream 131280 26567067 ~ 26578815 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other upstream 846011 27281798 ~ 27294911 (-)
rnf24 rnf24,LOC102778784 other upstream 2870234 29306021 ~ 29339847 (-)
G8701 NA other upstream 3153521 29589308 ~ 29593623 (-)

Expression


Co-expression Network