LOC120557175


Basic Information

Item Value
gene id LOC120557175
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 15312432 ~ 15313905 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797266.1
ATCGCACCTGGTAGACCTCCAGATTAACTGCTGCTGGCTGCAAACACCAAAACACATGCAGATTCagattctctctttctttttctgtggcACATCATCAAATTACTAAATGGAATCATTAAAAGTAGATGAGCAGTTACCTTCACCTCCACCATACTTCTTACAAGATGAAAGTCAAACTGGGCAAGATGGGAGGATCTACCATATTTACCCACCTTTCAGCCCTCCACCACCCCTTCAATTCTCCTTTTCTCCTGGAGTTGGCTCCGCCCAAACACACTCGCCTCTAACAGTGTCTGCTCTCCCTCAAGTTACTCCAAAGCTGAATTGTGTAAGCTATGAAACGGAGCTGTATCGCTGTCCAGCTCGGACAACATGCCCCTCTTGTCAGACTCGGGTCACCACGCAGGTCACCTACAAAGTCGGGAGGCAGGCGTGGCTCAtttgtcttgtgtttgtgttatgcgGGTTGGTGCTTGGATGCTGCCTGATTCAATTTTTTGTGAACTATTTTAAGGATGCCTATCACACATGTCCCCGCTGTCGACGGGTCCTCCATATACAAAGGAGGACATGCTGTGAATGAACACGCACAAGATTAACTACCAGCAGGCTAATGTGATGGCTAATAAGTTTTTTCATCTTAACAGGAGTTCAATTGCAGTAAAATGTATGTATACCTGTCTGAAAGGCATTCAGGATAACTTAAAATATATAGATTTAtaagtttaaatgtttaaaatataaGGATAATTCATGTTGGTTCCTGTTATGTTATGACTCTAGAGATTTGTAGCTATTTTAATCATGTTTTGTAACAAAATtctatcaaataaatgttttctctggaa

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797266.1 True 851 mRNA 0.42 4 15312432 15313905

Neighbor

gene id symbol gene type direction distance location
LOC120561684 NA coding downstream 473 15310698 ~ 15311959 (-)
zgc:77849 LOC104921184,LOC104966096,LOC102796782,LOC100695168,LOC101467750,LOC103369343 coding downstream 13594 15293871 ~ 15298838 (-)
myo15ab myo15a,LOC102296698,LOC101486664 coding downstream 180555 15072782 ~ 15131877 (-)
alkbh5 alkbh5 coding downstream 241694 15065648 ~ 15070738 (-)
mief2 mief2,LOC102193621,LOC100697825 coding downstream 248492 15054451 ~ 15063940 (-)
foxk1 foxk1 coding upstream 63295 15377200 ~ 15393673 (-)
LOC120564677 LOC104962345,LOC107388844,LOC108244157 coding upstream 81930 15395835 ~ 15401445 (-)
gpank1 gpank1 coding upstream 96593 15410498 ~ 15414963 (-)
LOC120564766 NA coding upstream 105347 15419252 ~ 15424386 (-)
LOC120561525 xylt1,LOC102778305 coding upstream 502433 15816338 ~ 15899401 (-)
G4713 NA non-coding downstream 49000 15199745 ~ 15263432 (-)
G4710 NA non-coding downstream 158286 15153544 ~ 15154146 (-)
G4668 NA non-coding downstream 258365 15053466 ~ 15054067 (-)
G4669 NA non-coding downstream 283294 15028486 ~ 15029138 (-)
G4670 NA non-coding downstream 299243 15012925 ~ 15013189 (-)
G4729 arpc1b,LOC100695691,LOC102293678,LOC101469153 non-coding upstream 14283 15328188 ~ 15329291 (-)
G4797 NA non-coding upstream 416750 15730655 ~ 15730956 (-)
G4798 NA non-coding upstream 421450 15735355 ~ 15735682 (-)
G4799 NA non-coding upstream 421884 15735789 ~ 15736178 (-)
G4815 NA non-coding upstream 467492 15781397 ~ 15781753 (-)
ubl5 ubl5 other downstream 408203 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 593330 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 1269922 14018902 ~ 14042510 (-)
G4168 NA other downstream 1745166 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 2272152 13037270 ~ 13040280 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 112639 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 1031813 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 2098148 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 2396734 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 2503602 17817507 ~ 17835761 (-)

Expression


Co-expression Network