rab11fip4b (rab11fip4,LOC102782519)


Basic Information

Item Value
gene id rab11fip4b
gene name rab11fip4,LOC102782519
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 23657337 ~ 23685439 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797366.1
agagagagagagagagagagagagagagagagagagagagagagagagagagagagagctgcagtCTGTTGGTGTAGAAGAAGCCAGGCAGCCGGTGCAGTGTTTTAAAGTGAACGATACATCTTGCTTCGCTCCTCAGCCTCTCTTTGGACTATACCACTAACAGGGACTCACCCTTTGGACTATCCCGACTCTTGCCTCGTAAGGGAACACCTGTGTGGGATGTGAGCCAAGACAACGGACTTAGACCCGGTGAGCAGGGAACAGTGGATGACTTCAGTGGATGAGGATTTTGCTGGTGGAAAGAGAGGGACTGCTGACCATGGACTCCCCTCACTAGTAAACGGGGGTGGTGAGGAGGAGCGGCTTTGTCCGGTCATCATGTGCACACGGGCCTATCCTGACCCCGTCCCTGAGCGCCAGCTGTTTCCAGGAGAGGTGGAGGAGCCTGAGGAAGAGGTTGCAGACGAGGCCAGGGAGAGGGAATCGGACAGAGACAGTGCAGTGGAAAGCACCCAAGGGTCAGACACCTTTGACGGGCTGATCAGACCTGGAGACAAGGAAGACGCACTGGGGGATCTCTTTTTCTCTGGGGAGAAGTGTGGTCAGACCAGCATCTCAGTGACCTCTGACCTATCAACACGTTCCTCCGCTTCTCTGAACGAGGAGCAGTTTGAGGACTACGGAGAAGGGGAGGAACCGGACTTCACTCCCAGCAGCCCCTGCCCGGAAGACGAGACTCGGACCAACGGGTACTCTGACCTCGGCTCATCTGTTCCCTCTAGtgcgGGCCAGACTCCTCGCAAGGTGCGTCAGCATTACACCGGTGAACTGATGGATGTCTACTGTTCTCAGTGCAGCAAAAAGGTCAACCTGCTAAATGACCTGGAGGTTCGCCTCAAAAACCTCAAGGCTAACAGCCCCAACAGGAAAATCACCAGCACTGCCTTTGGAAGGCAGCTGCTTCACAACAGCAACTTGAGCAGCAGTAATGGCAGCACGGAAGACCTTTTCCGAGACAGCATTGACTCCTGTGACATTGATATTAATGAGAAGGTGACTTCTCTGGAAAAGAAGGTGGCAGAACTCGAGAATGATATTATGATGAACGGTGATCTCAAGTCCAAGCTGAAGCAGGAGAACACACATCTGGTGCACAGGGTTAATGAGCTCGAGGAGCAGCTGAAAGACCAGGAGACGCGTGCAGAACAAATTCTACAGGAGGGGCTAAGACGACACCGAGAGTCCTACAGcaagatggagagagacaagAACACACAGATAGAGCTGCTGACCAACCGagTTAAGCAGGTGGAGGAAGAGAACAGTGAGATGAGTCTTAGTCTGTGCCGGCTCAAATCACAGACAGAGAAACTGGATGAGGAGAAGCAAAGGATGACAGACAAGCTGGAAGACACCAGTTTGCGCTTGAAGGATGAGATGGACCTTTACAGGAAAATGATGGACAAACTGAGACAGAACAGACACCAGTtccagaaagaaaaagaagccaTGCAGGAGCTGATAGAGGACCTGCGTCGAGAGCTGGAGCATTTGCAGCTCTTCAAGCTGGAGACGGAGAGGCCGGGCCGCAGTCGCAGCTCTTCCTCTGGGCTGGCGGACTTCAACAGCAGGACCAGGGAGGTGGAGCTAGAGCATGAGGTCAAGAGGCTCAAGCAGcgATTTGTGTCCCAGGACTTTCTTCCCCCTGAATTCCAGCACCTGGTGTTGTCTGGGGCTCGGCTCCATCCTGGTCTGATGGAGAACCAGAAGCTGAGGGAGCAGAACGACGAGCTTAACGGTCAGATCCTCAGCCTCAGTCTATATGAAGCAAAGACCCTGTTCGCCACACAGACCAAGGCCCAGTCTCTAGCTGCTGAGATAGAAAATGCCTCCAGAGACCAGTTAATGGAAGCCCTGAAGGAGCAGGAAGAAATTAATATACGTCTGCGACAgtacatggacaaaatcatccTGTCCATCCTGGACCACAACCCCTCCATCCTGGAGATCAAGGGCGACTAGCAGTGACTCAACTGGAATGAGAATCGTTCCTGCTCTCTGGAGAATGAGGAACATTCTAGTTGTTTGACCAGAACCTGCAACTCGAGTGAGGAATCTGTAAAGGAAAGCAGAGAGAACCAGAGCTAGTCTGAGGAACTGCAACATATAAATAGACACGCATCGCCCCCTGCTGTTTGTGGCGGTGAAATAACTTCTAGAATGGGATTCTACGCTGAACTTAAAGGGAGTTTTCTCAACCAGGGACTGCTCTCTGACTGCAGGTCATACTACTGTGACTCTTCAACTTGTTCTACCCTGCTCTGTTTTTATTCACTGTCTATGCTGTGAACTGTTGTTACTGTCACAACGTTGATCTCATATGACAAAACATGTGATTTCTTCCCAGGAACATCCTGCGCTCAACATGCTTTGAGGATCGACAAAGTTGCTCGATGTAGTACACTGGACATAATGTACCTTGGAATTAAAACTGGAACAATGTAACAAACCTGATGTGGGTTCTACTATTTCCTGTTGTAATATTACTTGTATTATTCACGGATACAGTTTGGTATGATGTTTTAGGAAAATGCAGTGAGACAGACGAACCATTTGGCAAGCAGACTGTAAACCCGACTCTCAGAGGCATGAAGGCAGGTAAACTGTCCATCTTTTCGACTCTGTCGTGTAGGTGTTCTCTGAAGAATGCATGTTGACGACGTTTTTGGACAGGCACGTTTTAAGAGAGGATAGAGAACAGGGTCAAAGCGgtcagagaaagaaaacaatagGAACCCCTGTAACTACAAGGAAGCAGAAGATTTGAAGTGAGCTTAAGAAGTGGGGCGTCAGATGATGGACCTTGTTTGCGAGCAAAGGAGGGTTTTGGTGAAGTCGGTGATGGTTAATTGAAGGTGGATTTGTTTTATTCTCaaaaaaatgtcttccagtAACCTTGCAAAAGCAATTGCAATGTCAATCAGTCCAATAGTGAGTCTTTTTTCACTGAGAAGTGGCTCTTAGTTGGTTCAGATGAGTAGGAGGGTGTCACTTTATGGAGCAGAAGCTGCAACCAAGGAGTGTCTTTAAACTGTAACTTCCATGGATGCTATTTGCTAGCAATGCATTGGCTTAAAAAAGATACATTGTTGCTACCCATAGACCCAATGATGTTGCACAGAAATATAAGGATATGAATGTACAGGGTGTGTGGTGGATTTCCATCAGTGTGACTGGTAGCCATTGTAACATGGTTTACTGAATCATCTCTCTATGCTCAGTGAAATCACCTCAGATATTGTACGTGAGCATGCACAGGAGATTGTTTTTGGTACAAAAAAACTGGATTAGCAATCTCATTGAGCCTACAGGTTGCAGATTATTTTTAAAGCCCTCTGGAACTCTAATACTGTAAATATCATGAATGTACAACTGGATATTTCACTTTCTGTGAGGCCAAAAAGGCTTTTTGACTTTAATCTCTGTAATTGGTTCAGATGCGTTTTAACACACATGTATTCATTACTGTAATGAAGAAGGCATTGTACAGGGAGGGAAAACAATTACAATCTGCTGCATTACCGTATGTTATTATTCTAAACTTGAGTTTTGCTTCCTTGCACAAACAAACGTTTTGCTTCCTTTTGCATGGTTCACCTATTCTTCTGTCTGTGCCTTTGAGGATATTTTTCAAGACAATGTTGCTATAGATTTACATAGTTTTTTGAAGGTACATTCTATGTCTACGTCTGAAATATTTTCTTGACTTGTAAATGTTGTAATTATATAGTGATAATTTGTATTCATGTGCCACTCACCACTCTTTTTTCACATTGATACTATGAAAACAATTTTATACAGTTTTATCAAGAAAAAACATGTGATTGCTTAGATGTCCTATTAGAAAAGCGGTATAGCACAATGCTTTGTATGGTATGCAGGCCAGGTTAGCAttttggaaatattttttttgttagtcatgGTAAGTCCATTGCTTTTCAATCTGCTTTATACTGGCTTTTACATGGTTGTAAAATGTCTTCCTAACTTAAACTAAATGGTGAGCATTATGAGCAATATTAACTTATTTACCAATACCTGCTGATTTGTGTTTTGCTTCACAAATATTTTCACTCTATAGCTGCTCGTGCCATTctagataaaaaaagaaacagaaagtaCAAAAGTACATTAAGATATAAAATTTGTCACAGACCCATTTCTTGTAGCTCTTAAATTTTGAATCATTAGGGCTATCCAATGTGATGTAGTCACTAAAACAGCAATAAAATGGCTTTGGTAGTGATGCCGTCtcattaaatttattttaaatgaaa
>XM_039797373.1
agagagagagagagagagagagagagagagagagagagagagagagagagagagagagctgcagtCTGTTGGTGTAGAAGAAGCCAGGCAGCCGGTGCAGTGTTTTAAAGTGAACGATACATCTTGCTTCGCTCCTCAGCCTCTCTTTGGACTATACCACTAACAGGGACTCACCCTTTGGACTATCCCGACTCTTGCCTCGTAAGGGAACACCTGTGTGGGATGTGAGCCAAGACAACGGACTTAGACCCGGTGAGCAGGGAACAGTGGATGACTTCAGTGGATGAGGATTTTGCTGGTGGAAAGAGAGGGACTGCTGACCATGGACTCCCCTCACTAGTAAACGGGGGTGGTGAGGAGGAGCGGCTTTGTCCGGTCATCATGTGCACACGGGCCTATCCTGACCCCGTCCCTGAGCGCCAGCTGTTTCCAGGAGAGGTGGAGGAGCCTGAGGAAGAGGTTGCAGACGAGGCCAGGGAGAGGGAATCGGACAGAGACAGTGCAGTGGAAAGCACCCAAGGGTCAGACACCTTTGACGGGCTGATCAGACCTGGAGACAAGGAAGACGCACTGGGGGATCTCTTTTTCTCTGGGGAGAAGTGTGGTCAGACCAGCATCTCAGTGACCTCTGACCTATCAACACGTTCCTCCGCTTCTCTGAACGAGGAGCAGTTTGAGGACTACGGAGAAGGGGAGGAACCGGACTTCACTCCCAGCAGCCCCTGCCCGGAAGACGAGACTCGGACCAACGGGTACTCTGACCTCGGCTCATCTGTTCCCTCTAGtgcgGGCCAGACTCCTCGCAAGGTGCGTCAGCATTACACCGGTGAACTGATGGATGTCTACTGTTCTCAGTGCAGCAAAAAGGTCAACCTGCTAAATGACCTGGAGGTTCGCCTCAAAAACCTCAAGGCTAACAGCCCCAACAGGAAAATCACCAGCACTGCCTTTGGAAGGCAGCTGCTTCACAACAGCAACTTGAGCAGCAGTAATGGCAGCACGGAAGACCTTTTCCGAGACAGCATTGACTCCTGTGACATTGATATTAATGAGAAGGTGACTTCTCTGGAAAAGAAGGTGGCAGAACTCGAGAATGATATTATGATGAACGGTGATCTCAAGTCCAAGCTGAAGCAGGAGAACACACATCTGGTGCACAGGGTTAATGAGCTCGAGGAGCAGCTGAAAGACCAGGAGACGCGTGCAGAACAAATTCTACAGGAGGGGCTAAGACGACACCGAGAGTCCTACAGcaagatggagagagacaagAACACACAGATAGAGCTGCTGACCAACCGagTTAAGCAGGTGGAGGAAGAGAACAGTGAGATGAGTCTTAGTCTGTGCCGGCTCAAATCACAGACAGAGAAACTGGATGAGGAGAAGCAAAGGATGACAGACAAGCTGGAAGACACCAGTTTGCGCTTGAAGGATGAGATGGACCTTTACAGGAAAATGATGGACAAACTGAGACAGAACAGACACCAGTtccagaaagaaaaagaagccaTGCAGGAGCTGATAGAGGACCTGCGTCGAGAGCTGGAGCATTTGCAGCTCTTCAAGCTGGAGACGGAGAGGCCGGGCCGCAGTCGCAGCTCTTCCTCTGGGCTGGCGGACTTCAACAGCAGGACCAGGGAGGTGGAGCTAGAGCATGAGGTCAAGAGGCTCAAGCAGGAGAACCAGAAGCTGAGGGAGCAGAACGACGAGCTTAACGGTCAGATCCTCAGCCTCAGTCTATATGAAGCAAAGACCCTGTTCGCCACACAGACCAAGGCCCAGTCTCTAGCTGCTGAGATAGAAAATGCCTCCAGAGACCAGTTAATGGAAGCCCTGAAGGAGCAGGAAGAAATTAATATACGTCTGCGACAgtacatggacaaaatcatccTGTCCATCCTGGACCACAACCCCTCCATCCTGGAGATCAAGGGCGACTAGCAGTGACTCAACTGGAATGAGAATCGTTCCTGCTCTCTGGAGAATGAGGAACATTCTAGTTGTTTGACCAGAACCTGCAACTCGAGTGAGGAATCTGTAAAGGAAAGCAGAGAGAACCAGAGCTAGTCTGAGGAACTGCAACATATAAATAGACACGCATCGCCCCCTGCTGTTTGTGGCGGTGAAATAACTTCTAGAATGGGATTCTACGCTGAACTTAAAGGGAGTTTTCTCAACCAGGGACTGCTCTCTGACTGCAGGTCATACTACTGTGACTCTTCAACTTGTTCTACCCTGCTCTGTTTTTATTCACTGTCTATGCTGTGAACTGTTGTTACTGTCACAACGTTGATCTCATATGACAAAACATGTGATTTCTTCCCAGGAACATCCTGCGCTCAACATGCTTTGAGGATCGACAAAGTTGCTCGATGTAGTACACTGGACATAATGTACCTTGGAATTAAAACTGGAACAATGTAACAAACCTGATGTGGGTTCTACTATTTCCTGTTGTAATATTACTTGTATTATTCACGGATACAGTTTGGTATGATGTTTTAGGAAAATGCAGTGAGACAGACGAACCATTTGGCAAGCAGACTGTAAACCCGACTCTCAGAGGCATGAAGGCAGGTAAACTGTCCATCTTTTCGACTCTGTCGTGTAGGTGTTCTCTGAAGAATGCATGTTGACGACGTTTTTGGACAGGCACGTTTTAAGAGAGGATAGAGAACAGGGTCAAAGCGgtcagagaaagaaaacaatagGAACCCCTGTAACTACAAGGAAGCAGAAGATTTGAAGTGAGCTTAAGAAGTGGGGCGTCAGATGATGGACCTTGTTTGCGAGCAAAGGAGGGTTTTGGTGAAGTCGGTGATGGTTAATTGAAGGTGGATTTGTTTTATTCTCaaaaaaatgtcttccagtAACCTTGCAAAAGCAATTGCAATGTCAATCAGTCCAATAGTGAGTCTTTTTTCACTGAGAAGTGGCTCTTAGTTGGTTCAGATGAGTAGGAGGGTGTCACTTTATGGAGCAGAAGCTGCAACCAAGGAGTGTCTTTAAACTGTAACTTCCATGGATGCTATTTGCTAGCAATGCATTGGCTTAAAAAAGATACATTGTTGCTACCCATAGACCCAATGATGTTGCACAGAAATATAAGGATATGAATGTACAGGGTGTGTGGTGGATTTCCATCAGTGTGACTGGTAGCCATTGTAACATGGTTTACTGAATCATCTCTCTATGCTCAGTGAAATCACCTCAGATATTGTACGTGAGCATGCACAGGAGATTGTTTTTGGTACAAAAAAACTGGATTAGCAATCTCATTGAGCCTACAGGTTGCAGATTATTTTTAAAGCCCTCTGGAACTCTAATACTGTAAATATCATGAATGTACAACTGGATATTTCACTTTCTGTGAGGCCAAAAAGGCTTTTTGACTTTAATCTCTGTAATTGGTTCAGATGCGTTTTAACACACATGTATTCATTACTGTAATGAAGAAGGCATTGTACAGGGAGGGAAAACAATTACAATCTGCTGCATTACCGTATGTTATTATTCTAAACTTGAGTTTTGCTTCCTTGCACAAACAAACGTTTTGCTTCCTTTTGCATGGTTCACCTATTCTTCTGTCTGTGCCTTTGAGGATATTTTTCAAGACAATGTTGCTATAGATTTACATAGTTTTTTGAAGGTACATTCTATGTCTACGTCTGAAATATTTTCTTGACTTGTAAATGTTGTAATTATATAGTGATAATTTGTATTCATGTGCCACTCACCACTCTTTTTTCACATTGATACTATGAAAACAATTTTATACAGTTTTATCAAGAAAAAACATGTGATTGCTTAGATGTCCTATTAGAAAAGCGGTATAGCACAATGCTTTGTATGGTATGCAGGCCAGGTTAGCAttttggaaatattttttttgttagtcatgGTAAGTCCATTGCTTTTCAATCTGCTTTATACTGGCTTTTACATGGTTGTAAAATGTCTTCCTAACTTAAACTAAATGGTGAGCATTATGAGCAATATTAACTTATTTACCAATACCTGCTGATTTGTGTTTTGCTTCACAAATATTTTCACTCTATAGCTGCTCGTGCCATTctagataaaaaaagaaacagaaagtaCAAAAGTACATTAAGATATAAAATTTGTCACAGACCCATTTCTTGTAGCTCTTAAATTTTGAATCATTAGGGCTATCCAATGTGATGTAGTCACTAAAACAGCAATAAAATGGCTTTGGTAGTGATGCCGTCtcattaaatttattttaaatgaaa

Function

symbol description
rab11fip4 Enables protein homodimerization activity and small GTPase binding activity. Involved in regulation of cytokinesis. Located in cleavage furrow; cytoplasmic vesicle; and midbody.

NR:

description
rab11 family-interacting protein 4A-like isoform X3

GO: NA

KEGG:

id description
K12485 RAB11FIP3_4; Rab11 family-interacting protein 3/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797366.1 True 4340 mRNA 0.45 14 23657337 23685439
XM_039797373.1 False 4259 mRNA 0.45 13 23657337 23685439

Neighbor

gene id symbol gene type direction distance location
LOC120555782 NA coding downstream 1081 23650623 ~ 23656256 (-)
suz12b suz12 coding downstream 101087 23543467 ~ 23556250 (-)
atad5b NA coding downstream 115376 23535582 ~ 23541961 (-)
LOC120562252 adap2,LOC102784227 coding downstream 125295 23525332 ~ 23532042 (-)
rhot1b LOC103373013,LOC101484650,LOC100702459,LOC102784702,LOC102202739 coding downstream 133175 23508785 ~ 23524162 (-)
LOC120556266 LOC103353763,LOC100700287 coding upstream 381489 24066928 ~ 24068828 (-)
lyl1 LOC105910150 coding upstream 406228 24091667 ~ 24096223 (-)
LOC120569492 NA coding upstream 448458 24133897 ~ 24135669 (-)
zglp1 zglp1 coding upstream 451949 24137388 ~ 24145207 (-)
fdx2 fdx1l,LOC104950501 coding upstream 459963 24145402 ~ 24149825 (-)
G7069 NA non-coding downstream 72815 23584200 ~ 23584522 (-)
G7067 NA non-coding downstream 80208 23576928 ~ 23577129 (-)
LOC120555765 NA non-coding downstream 86303 23566760 ~ 23571034 (-)
G6995 NA non-coding downstream 148777 23508274 ~ 23508560 (-)
G6993 NA non-coding downstream 228192 23427512 ~ 23429145 (-)
LOC120556236 NA non-coding upstream 251970 23937409 ~ 23943573 (-)
G7141 NA non-coding upstream 330020 24015459 ~ 24055760 (-)
LOC120556287 NA non-coding upstream 371062 24056501 ~ 24059844 (-)
G7179 NA non-coding upstream 397074 24082513 ~ 24084276 (-)
LOC120567450 NA non-coding upstream 411253 24096692 ~ 24099093 (-)
G7065 NA other downstream 84288 23572705 ~ 23573049 (-)
G6943 NA other downstream 415047 23213856 ~ 23242290 (-)
G6924 NA other downstream 492400 23088500 ~ 23164937 (-)
G6881 usp43,LOC104947996 other downstream 668837 22981925 ~ 22988500 (-)
LOC120565362 pik3r6 other downstream 965004 22665375 ~ 22692333 (-)
LOC120557242 NA other upstream 26388 23711827 ~ 23720750 (-)
si:ch211-207j7.2 NA other upstream 48925 23734364 ~ 23746031 (-)
G7071 NA other upstream 66587 23752026 ~ 23768841 (-)
palm3 NA other upstream 87417 23772856 ~ 23811021 (-)
LOC120562828 elof1,LOC103353603,LOC103384163,LOC100701647,LOC101173766 other upstream 197306 23882745 ~ 23885762 (-)

Expression


Co-expression Network