LOC120557242


Basic Information

Item Value
gene id LOC120557242
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 23711827 ~ 23720750 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797387.1
CTCTTGTGTCACATGTGCACAGCCCGAGGGATTTCCAGTGGTGTTTTTGTGGTTCACGTCGGGCTAAAACACCCGGTAATTAGAAGAATAAAGCAAAAAAGAGATGGATAGAGACTTTTTTCCTGAGCCGGGACGTCTGTTGACATTTGTGAGGACACTCAAAGAGGTGTTTGACGTGTGTGACGAAGACTCAGACGGGTTTATCCGCCCTGAACACTTTGTGCAGTTGGGTTCCCAGTTTGGACAAGCAGAACAGGTGAAGAAGTTGGCCCAATGTCTAGACCCCGACACTTTTGGGAGGATCAACTTCAAAATCTTCTGCCGTGGCGTCCTCACCATGAAAGACTAAGAGTCTCTGTAAAAGCAGGTCAGCTTTCCCACTACAGTGGACCCAGGCCAACCAGGACACAGGAAAGGACAGAGCCGGG
>XR_005638947.1
CCAAAATGAAACGCAGCCAGTGTATCGGCCCTCAGCCAGcacagaatatatttacagtgcCTTTTGTACCATTTGGGCTGTAAATTACTGGTGAAGAAGTTGGCCCAATGTCTAGACCCCGACACTTTTGGGAGGATCAACTTCAAAATCTTCTGCCGTGGCGTCCTCACCATGAAAGGTTATGTTGGGATCCTTAAAAAGGAAAGGACACAGTTCATCACAGGGCCATATGAGACAGCTAAGAGTTGTTATCAGGtaa

Function

GO:

id name namespace
GO:0051726 regulation of cell cycle biological_process
GO:0000910 cytokinesis biological_process
GO:0048592 eye morphogenesis biological_process
GO:0030139 endocytic vesicle cellular_component
GO:0055038 recycling endosome membrane cellular_component
GO:0030496 midbody cellular_component
GO:0032154 cleavage furrow cellular_component
GO:0042803 protein homodimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797387.1 True 428 mRNA 0.50 3 23713147 23720750
XR_005638947.1 False 259 transcript 0.45 3 23711827 23714086

Neighbor

gene id symbol gene type direction distance location
rab11fip4b rab11fip4,LOC102782519 coding downstream 26388 23657337 ~ 23685439 (-)
LOC120555782 NA coding downstream 55571 23650623 ~ 23656256 (-)
suz12b suz12 coding downstream 155577 23543467 ~ 23556250 (-)
atad5b NA coding downstream 169866 23535582 ~ 23541961 (-)
LOC120562252 adap2,LOC102784227 coding downstream 179785 23525332 ~ 23532042 (-)
LOC120556266 LOC103353763,LOC100700287 coding upstream 346178 24066928 ~ 24068828 (-)
lyl1 LOC105910150 coding upstream 370917 24091667 ~ 24096223 (-)
LOC120569492 NA coding upstream 413147 24133897 ~ 24135669 (-)
zglp1 zglp1 coding upstream 416638 24137388 ~ 24145207 (-)
fdx2 fdx1l,LOC104950501 coding upstream 424652 24145402 ~ 24149825 (-)
G7069 NA non-coding downstream 127305 23584200 ~ 23584522 (-)
G7067 NA non-coding downstream 134698 23576928 ~ 23577129 (-)
LOC120555765 NA non-coding downstream 140793 23566760 ~ 23571034 (-)
G6995 NA non-coding downstream 203267 23508274 ~ 23508560 (-)
G6993 NA non-coding downstream 282682 23427512 ~ 23429145 (-)
LOC120556236 NA non-coding upstream 216659 23937409 ~ 23943573 (-)
G7141 NA non-coding upstream 294709 24015459 ~ 24055760 (-)
LOC120556287 NA non-coding upstream 335751 24056501 ~ 24059844 (-)
G7179 NA non-coding upstream 361763 24082513 ~ 24084276 (-)
LOC120567450 NA non-coding upstream 375942 24096692 ~ 24099093 (-)
G7065 NA other downstream 138778 23572705 ~ 23573049 (-)
G6943 NA other downstream 469537 23213856 ~ 23242290 (-)
G6924 NA other downstream 546890 23088500 ~ 23164937 (-)
G6881 usp43,LOC104947996 other downstream 723327 22981925 ~ 22988500 (-)
LOC120565362 pik3r6 other downstream 1019494 22665375 ~ 22692333 (-)
si:ch211-207j7.2 NA other upstream 13614 23734364 ~ 23746031 (-)
G7071 NA other upstream 31276 23752026 ~ 23768841 (-)
palm3 NA other upstream 52106 23772856 ~ 23811021 (-)
LOC120562828 elof1,LOC103353603,LOC103384163,LOC100701647,LOC101173766 other upstream 161995 23882745 ~ 23885762 (-)
G7323 NA other upstream 811486 24532236 ~ 24535316 (-)

Expression


Co-expression Network