LOC120557332


Basic Information

Item Value
gene id LOC120557332
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 21812708 ~ 21818443 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797610.1
GCCAAGAAATGACAACGCATACATGGTTTGAAAATACTATATGGGGAGGAATGTGCGCTCTGTTCAAAATAACTAACTCTTACAACCACAGAAGGAGGCTAAGGAAAATATATAATGAAGTTCTTCAGGAACAAGAGTCACAAGGTGTACCCACTGAAGAAAGAAAGTCTGACATGGAGCCGGATGAGACTGAGGATGCCGAACAAATACCACCTGAGATACAGTCACCTGATTTAGAGACCTCACATCATCAAAATGTAGAGGAAGAGTGCCTACCTAAAGGTGTCATCACAGACACGGTACACGTCGTCGTCACAGATGAAGAAGACGACGAACAAGAACATACACAGTCACCTGACTTAGAGACCTCACATCATCAAAATGTAGAGGAAGAGTGCCTACCTAAAGGTGTCATCACAGACACGGTACACGTCGTCGTCACAGATGAAGAAGACGACGAACAAGAACATACACAGTCACCTGACTTAGAGACCTCACATCATCAAAATGTAGAGGAAGAGTGCCTACCTAAAGGTGTCATCACAGACACGGTACACGTCGTCGTCACAGATGAAGAAGACGACGAACAAGAACATACACAGTCACCTGACTTAGAGGAAACACTGCCACTGAATACACCTACACAGCAGCAAGAGAAACTTTACTGCTTATGCCGCCAGCCAAACTATGAACATGAGCCCTATGTAGAATGCAAGAAATGCAAAGACTGGTTTCATCCATTTTGTGTTGGAGCACGGACACATGAAGATCTGGAATGGATTTCACCTTGGTTTTGTCCAAATTGTTCTAGTCAACCCCCCAAAAAGCCTAAGAAAGCAGCTCGTCGGCTATTCAGTAAACAAGAAAGCATAGAAGACAAGGAGATTTGTGACAGggatgagaggagagaagacacagaTAGCAACACATCTAGCCCTGAAGTCTCTAGCAGGTCAGACTCTAGTGACGAGTGCTGTCCGGAGTGTTACCAAATCCCTTTTTCACGAGCTGAGTGGGAGGACATAAAACCTGTAGATACCGAAAAAGGAACAAGTGGACATCTTGGAGGCACATGGTGGAAGATGCATCCACTGATGAATGGCTTCAAGCGTTGCTGCAGGTACACCGAGAGTTCTTGGGAAGGAGGTGGGGCCAGGGGAAAGTCACTTGGCTCATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797610.1 True 1178 mRNA 0.46 7 21812708 21818443

Neighbor

gene id symbol gene type direction distance location
LOC120567942 sphk1 coding downstream 20592 21755292 ~ 21792116 (-)
aanat1 aanat,LOC102776855 coding downstream 105857 21703381 ~ 21706851 (-)
ten1 ten1 coding downstream 163802 21645797 ~ 21648906 (-)
LOC120566963 NA coding downstream 251065 21557960 ~ 21561643 (-)
LOC120566968 LOC106610423,LOC105006713,LOC108260735,LOC106610424 coding downstream 256543 21554425 ~ 21556165 (-)
cygb2 cygb,LOC104922950,LOC103373403 coding upstream 38227 21856670 ~ 21877258 (-)
LOC120558174 ubn2,LOC103364441 coding upstream 181825 22000268 ~ 22020435 (-)
ttc26 ttc26,LOC102798810 coding upstream 203801 22022244 ~ 22033208 (-)
slc25a38b LOC103364442,LOC107382263,LOC108242715,LOC106515296,LOC105939773,LOC103153186,LOC101165446,LOC106917329 coding upstream 223282 22041725 ~ 22051538 (-)
LOC120565705 NA coding upstream 234567 22053010 ~ 22085472 (-)
LOC120568701 NA non-coding downstream 785 21811200 ~ 21811923 (-)
G6617 NA non-coding downstream 50402 21762097 ~ 21762306 (-)
G6615 NA non-coding downstream 58550 21753721 ~ 21754158 (-)
G6616 NA non-coding downstream 59564 21751844 ~ 21753144 (-)
G6602 NA non-coding downstream 69598 21742856 ~ 21743110 (-)
G6618 NA non-coding upstream 17384 21835827 ~ 21847633 (-)
G6653 NA non-coding upstream 149561 21968004 ~ 21976241 (-)
G6654 NA non-coding upstream 150404 21968847 ~ 21977148 (-)
LOC120568056 NA non-coding upstream 216842 22035285 ~ 22040931 (-)
LOC120569580 NA non-coding upstream 220566 22039009 ~ 22039151 (-)
G6592 ube2o,LOC106534564 other downstream 102896 21708540 ~ 21709812 (-)
LOC120566957 NA other downstream 243649 21563091 ~ 21569059 (-)
LOC120574674 NA other downstream 1619370 20187281 ~ 20193338 (-)
spink4 NA other downstream 1767982 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 2016186 19766497 ~ 19796522 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 510076 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 846932 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 1163482 22981925 ~ 22988500 (-)
G6924 NA other upstream 1270057 23088500 ~ 23164937 (-)
G6943 NA other upstream 1395413 23213856 ~ 23242290 (-)

Expression


Co-expression Network