cdkn2a/b


Basic Information

Item Value
gene id cdkn2a/b
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 29609150 ~ 29611737 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797793.1
CACCCATTCAAAACAAGCCCAGACACACACCGACCGATTGCTGGACAGGCGATGCACGGTGTACTCATCCGACCCACAGGACTGGACAAACTGACGAGCCGGGGACGGTTGAAGACCCACCGCCACACATCAAcgacacagctgtatattattCGACACGCGCTCTTTGGTGTTTTTTGAGCCGTTCCTGTTCCTCCAGTAGTCATCATCAAGACTACCTGTCAAAACGACAAAAGTGACAGATTCACGATCGCTATCGCTGCAGATTTCTGGACACGACAATGACTCTGGAGGATGATCTGACAACAGCCGCAGCGATGGGAAACACGGCAGATGTGGAGTATCTCCTGCGGGCAGGAGCTGAAGTTAACGGCGTCAACTGTTTCGGTCGAACCGCTCTACAGGTGATGATGATGGGGAGCACGCCGGTGGCTCAGCTGTTACTGAAGCACGGAGCGGATCCCAACGTGGCGGACACAAGCACCGGGACCACCCCGCTGCATGACGCGGCCAGGACGGGCTTTCTGGACACTGTGCGGTTGTTGGTGCAATTCCTGGCTGACCCGCAGACCAAAGACAATACAAACAATCGGGCTATCGATTTGGCCCGACAGAACGGCCATTTAGATGTGGTCGATTTTCTGCAGTCTCTGTAAAATACTCCGTGATATTTTTTGTTGCAAATGGGGGCTCTGAGAAACGGGGCATGACGAGGCCTGCAGCCAAAATTATGCATTAGAATGTTttgctgaaaaacatttttttttttatttatttgtcagattattttatttttttgctgataggcatcttttttgttgtttgaacGAAATCGGGGTTAGGCTCAGGGTcgtttttataatatatataatataatttaatataatataatagccAGGCTATTGGGCTACTGATATTATACAGCGACCTTAATTAACACAATTTGTTGTAGATTTATCTTCCGTGGTATAATTGAAATATAGGCTATCGATTAGCTTATAAGAAACCCCACTTTATATAGTGTACAGTTTTAATGTTTGTTAAGTAGCctaaattgtatttttaaaataaaatttaaaatatttaaccaAATATTTAACCAAAGCCATTCAAAATGTTTTGCACATTGCACATTAGTGTCTAACGTATCCTGTGAGCATTATCTTTATTCTGCATAGACTTCGGGTCCCACTTGCTGTTTGTACAAATGCTATTTCCGGACTCGCATATATTATGCACTTTAATAAAATCGAGATTTAGGCcta

Function

NR:

description
PREDICTED: cyclin-dependent kinase 4 inhibitor B-like

GO: NA

KEGG:

id description
K04685 CDKN2B, P15, INK4B; cyclin-dependent kinase inhibitor 2B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797793.1 True 1265 mRNA 0.43 2 29609150 29611737

Neighbor

gene id symbol gene type direction distance location
LOC120557425 LOC102294808,LOC101473017,LOC107091121,LOC100696115,LOC102214471,LOC106949618,LOC103466417 coding downstream 24079 29569270 ~ 29585071 (-)
LOC120564966 wbp1,LOC106535359 coding downstream 94980 29500668 ~ 29514170 (-)
pdcd4a LOC104951176,LOC103361051 coding downstream 111487 29480195 ~ 29497663 (-)
mogs mogs coding downstream 129391 29470993 ~ 29479759 (-)
LOC120572938 LOC103361029,LOC102212686,LOC102777346,LOC100696909 coding downstream 151047 29454310 ~ 29458103 (-)
cxxc4 cxxc4 coding upstream 96633 29708370 ~ 29738207 (-)
ppa2 LOC103361132 coding upstream 183044 29794781 ~ 29803619 (-)
ints12 ints12 coding upstream 212082 29823819 ~ 29830015 (-)
LOC120569156 LOC102312368,LOC100706304,LOC102797228,LOC101468181 coding upstream 350893 29962630 ~ 29974420 (-)
LOC120569234 LOC102312368,LOC100706304,LOC102797228,LOC101468181 coding upstream 416372 30028109 ~ 30043664 (-)
G8694 NA non-coding downstream 40169 29564868 ~ 29568981 (-)
G8610 smox non-coding downstream 237811 29370601 ~ 29371339 (-)
G8609 smox non-coding downstream 242669 29364466 ~ 29366481 (-)
G8584 NA non-coding downstream 318337 29290300 ~ 29290813 (-)
G8582 NA non-coding downstream 326106 29282832 ~ 29283044 (-)
G8704 NA non-coding upstream 3388 29615125 ~ 29615400 (-)
G8707 NA non-coding upstream 8282 29620019 ~ 29620484 (-)
G8790 NA non-coding upstream 394657 30006394 ~ 30007983 (-)
G8834 hadh,LOC103384097 non-coding upstream 659727 30271464 ~ 30273350 (-)
G8843 NA non-coding upstream 742701 30354438 ~ 30354652 (-)
G8701 NA other downstream 15527 29589308 ~ 29593623 (-)
rnf24 rnf24,LOC102778784 other downstream 269303 29306021 ~ 29339847 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 2314239 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 3030335 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 3073414 26533833 ~ 26535736 (-)
bnc2 bnc2 other upstream 964135 30575872 ~ 30744878 (-)
G8975 NA other upstream 1359651 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 2322900 31934637 ~ 32006542 (-)
LOC120567365 NA other upstream 2610220 32221957 ~ 32226423 (-)
lrba NA other upstream 2972987 32584724 ~ 32781154 (-)

Expression


Co-expression Network