LOC120557822 (LOC104965748)


Basic Information

Item Value
gene id LOC120557822
gene name LOC104965748
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 34556973 ~ 34560875 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798458.1
AAACTGGTTTTGCGAGTTGCAAGTTTTAGGCTACATATTTCCGTATCAAATGCACAATGCTCAATCACATTTCAGAGCTCCTCTCCAGACAGAAACAGTGGGATGACCAGGCTCTGGTGAAAAAGATATACAACCGCCTTAAAGAGGATGGTCTGCCAGTGTGGATGGATATCGAAGGAGGGGTGACAGGGAACATAAACGACTCgatgGCTGCAGGTGTCGAGGAGGCTTGTGTGATTTGTCCATTCATGACTCCAGCTTACCAGGCGTCCCGAAGCTGTAAGAAAGAGCTCAACTACGCAGACAGCAGGGAGGTCCCGGTCGTGCCGGTGATGCTGGCCAACGACTGGGAGGCCAGCGAGTGGCTGGGGCTGATCACTGCAGGCCTGCTGTGGGTGGACTTCAGaaacgCAGAGAACGACGAGGAGCACTTTGAGATGCGTCTCAGGTCTCTGGAGGAGGAGATCATGTTTATCGCCGGTCACCTCCTGGAAGTTGAAAAACCTGCAAGAGAGGAGGTGGATCTGCCAGAACCATCAAAACCCCATCTGAAGAAGAAACCGGGACGAAGATTTCGCCATGCGCTCTCAGACCTCTACATCTATGACTTGGGTGAGCAAGATGAGCAGTCAACTGGTGACACCAGAAACACAGTGGCGCTCAACCAGACACTTGGAGATCAGTGTTACTGGGTGGAGGTTAAGGGTGACGGCTGTAAGTACTACAGGAACGCGGTCACCGACAGATACCTGGGGTTTGACCCCAGCAGCGAGCAGGTCCACTCTGAGGCCAGTCCGTCCATGTCTGAGGAGTGGCTGCTGTTGGCGGATCAGACGGACCAGAGCCATCAGAGAGCCGTCGTCATCAAGAACAAACACTCGGGGAGGTTCCTGGCAGTCCAAAATGGCCACTTCATTGGACTAACATCGTACAATGAAGACTGCAAATGGTTTTTAGAATAAAACGAGACAATTTAACTGGATTTTAGAATGTGGTTGCTTCTGTCAAAGACACATtagttataataaaaaaaaaaaaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC104965748

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798458.1 True 1040 mRNA 0.50 6 34556973 34560875

Neighbor

gene id symbol gene type direction distance location
LOC120561135 lrat,LOC103357487,LOC103156491,LOC107094918 coding downstream 27875 34527053 ~ 34529098 (-)
npy2r NA coding downstream 35216 34516787 ~ 34521757 (-)
tlr3 NA coding downstream 145612 34405052 ~ 34411361 (-)
LOC120564947 LOC101485601,LOC102207182,LOC103357494,LOC100703355,LOC102781869,LOC102299071 coding downstream 155979 34390148 ~ 34400994 (-)
frg1 NA coding downstream 951841 33592642 ~ 33605132 (-)
fam193a fam193a coding upstream 80329 34641204 ~ 34664220 (-)
slkb LOC103355271,LOC100692830,LOC107394353 coding upstream 380508 34941383 ~ 34974821 (-)
adra2c LOC104953545,LOC103354520,LOC103384182 coding upstream 655962 35216837 ~ 35220376 (-)
dok7b LOC103354519,LOC104946983,LOC107393269,LOC102790269 coding upstream 811142 35372017 ~ 35398518 (-)
htt htt coding upstream 896064 35456939 ~ 35492359 (-)
G9770 NA non-coding downstream 24969 34530343 ~ 34532004 (-)
G9747 NA non-coding downstream 78523 34474172 ~ 34478450 (-)
G9745 NA non-coding downstream 88790 34462958 ~ 34468183 (-)
G9732 NA non-coding downstream 191695 34365016 ~ 34365278 (-)
G9730 NA non-coding downstream 201647 34355008 ~ 34355326 (-)
G9836 arfip1 non-coding upstream 119666 34680541 ~ 34685004 (-)
G9838 NA non-coding upstream 144983 34705858 ~ 34706062 (-)
G9841 NA non-coding upstream 162105 34722980 ~ 34723718 (-)
G9842 NA non-coding upstream 162902 34723777 ~ 34726114 (-)
G9867 kiaa0922 non-coding upstream 263757 34824632 ~ 34825454 (-)
G9740 NA other downstream 99338 34452850 ~ 34457635 (-)
stox2a stox2,LOC100702551,LOC102293991,LOC101478850,LOC102775740 other downstream 1031458 33497102 ~ 33525515 (-)
tapt1b tapt1,LOC104934196,LOC102290950 other downstream 1192748 33306785 ~ 33364225 (-)
G9488 NA other downstream 1272893 33283078 ~ 33284080 (-)
G9418 fbxw7,LOC104948758 other downstream 1422053 33092460 ~ 33134920 (-)
G9997 NA other upstream 837765 35398640 ~ 35400474 (-)
rgs12b rgs12,LOC104946104 other upstream 843940 35404815 ~ 35451211 (-)
LOC120572869 NA other upstream 1023595 35584470 ~ 35586613 (-)
micall1a LOC100693188 other upstream 1383173 35944048 ~ 35969266 (-)
slc5a10 slc5a10,LOC102791530,LOC103460715 other upstream 1672332 36233207 ~ 36256880 (-)

Expression


Co-expression Network