spock3 (spock3)


Basic Information

Item Value
gene id spock3
gene name spock3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 27424468 ~ 27442182 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039798462.1
CGGTGCCATGCGCGTTCCCGTTTACTGCTGCGCACAGACAGCCGGTgcggagagagaaagagagatagagagagagaggagagggctGTCATAACTAGTGACAGAAAACGGCAGCGAGCACATACAGTCTGGATAGCAGCTGATGCGACAAGATGCTGAGCGTCGCCTTGCTGTGTGTGTACGCCGTCGCCTTCGGACACGTCTCCGCTCGCTCCGACAGCGGCAATTTTTTGGATGATAAGTGGCTCGCTGGGAGATGGGACAAATTCAGAGATGAAGTGGAGGAGCCTGGAACATGGACTCCATCCAAGCCCTTCGATCAAGgcCTTGATCCAGCCAAAGACCCCTGTCTTAAGATCAAATGCAGTCGCCACAAGGTGTGTGTGGCTGAGGATTCTAAGACTGCCACTTGTGTCAGCCAGAGGAGAGTTAGTTTTAAAGATGCCAGTTTGTACCAGAGTCCAGGGTCGAAGTGCAAACCCTGCCCTGTGGTCCACCCCTCTCCTGTTTGTGGAACTGACGGCCACTCCTACTCCACCAAGTGTAAGTTAGACTACCAGGCATGCATCACAGGAAAGAAGATCGCTGTGAAGTGTTCTGGCATGTGTCCTTGCCCCTCTCAGCCTGAACAGAGCTCTGCAGAAAAGAAAGTGTGCAGTGAGTCGGATCTGAAGGAGGTGGTGAGTCGTCTGAGAGACTGGTTTAGAGTGCTGCATGAGAATGGCAACCACAAGAGAGTCAAGATCCAGAAGCCAGAGAAAAACAAGTTTGAGGTCGGGGCGTCACCTATTTGTAAGGACCCTCTGGGCTGGATGTTCTCCCGACTGGACACAAATTTTGATGTCCAGCTGGACCAATCGGAGATCCAGAGCCTCTACCTGGACAGGAACGAGCCATGCTCTGACGCGTTCTTCAAATCCTGCGATACACGCGCCGACAATGTTATAAGCAGCTCTGAGTGGTGCACATGCTTCCAGAGGTACACAGATTCCCCTTGTAAAGCAGAGCTGTCCAGTGTCAACAAAAAGCAAGCAGGGAAGAAACTGCTTGGTCAGTACCTGCCATCCTGTGATGAGGAAGGTTACTATAGGTCCCACCAGTGTCACAGCAGCAGCGGCCAGTGCTGGTGTGTGGATCGCTATGGCAACGAGGTGGCCAGCTCACGCACCCATGGCCCTGCAAACTGTGGCGTGATATTGGAGTCTTCTGGAGACCTCGGCAGCGGAGACTCGCTGTTCACTGCTGACGATGAAGATTCCTTTGTGCTCAACGACCAGGCTGGGATGGACGATGAGGACGACGAAGATGAGGATGATGACGATTTCAACGACGAATATCTGTCGTaatttcaaaaaagaaaagaaaaaaagagaaaactgtTTGTTTGGTCAAACTGCACGTTTCTAGGTGACTCCCCAGGCAGATACTTAATCGTACTAACAGCCTATGGACTACTCTCTGTGTATTGTTTGTtcataagttttaaaaaacacacaaaaaaaaatatatttctggcaaatgtttattatttctcttcctctttaagTATACAATATTATTGGTTAATGGCACTTGTTCACTTGTGTGTCAGCCAACCAGAGAACATGACTAAGGACTAATCGACAAACCAATCCCGTGCTTTGGATTTGGTCATGTGTGCAAAGACCTCTCCCTTCATTGGACAGTCCATGTCTTCTAGTGTGTCCTGTCCTTATGCAGCACTCTGATGCCTGAGTGTGTTGATGCCTAGGGCGCAACGTTAAAGAGATTTCCCCCtcttcattccttcatcctcttcctcccctccaCACCCCCGCTCCCCCACCCTGTTACTCCTTATCAAATGTTCCTGTGTATAGGTGGGATGTTGATGATGTAGATAAGAGAATATTGCACTCTTTAGGTTTCTTTTGATCTTGATttgtaactgtgactgtaactgtgtGAAAAAACAAGATAACAGTTAGACATGCTTCATTAGGAGAATTAAGGCAAAAAACAACAGTGCAAGTTGGATAACAATCAGAACCGACATGCTTGCTGttttcacagagacacaaatcAAGTCAAATCATCTCAAAGGCTGAGCAACGGGGAAAGACAAATTACTGCTTGGCTGGTGGTGTTAGGGGGAAAATGTTATCTATTTTTCTAATCCATTGTCGGACGAATACAGAAGATGAAACAGATTTGTCGTAGCATGTCTAATACTGTGTGATGTTGTTTCAGTCTGTAGAACCAGAGGCTAAAACCTTTGTGGAACTCAAAacataatgttgcttgaggggGGAAAAATTCCCTCAAGCGTGTACAGATGAAACTGCACTTGCATAGTTATAAACTGTTTAAGCCACAAGTCTGTctgataatttaaaaaaaaaaaaaaaaaaaagttgactgACCTTTAATATATGTCAGTGAGCTCAAAGAAAACCTCATCACAGCTCAGAAGTGGAGGTGATGTTTTAACTGTTCAGATATGAGTCATAACATGATTTGAGCACACAGTGTAACAGAATAACTCTCTTCTTGCACAGTAATAAAACCACAGAACCATGCAGACCTGTTAAAATGTCTGGCAGGGGATAAAGGGTGAGGTGTGCCTTTTACCGGTGAGGACAGATGGTGGAGATGGTGTGAGAAGCATGCGTTACTGGACTGACTTTAGCTTGTTATTACACTGCATAAGAGTGGCATTACTGTTAAAGCTTGGATACTATTTGGGTTTTGGTATGGCTTGTGTTTTGGGTCGCTCTTACGATGGTGTTACATAGGCCATATTTCAGATCTTTGATTTGTTACATAGGATAGCTAGAATGTAGAGAAGCACAGATATACTTAGCAGTTAAGGCATACAAACACTTAGATTCTGCtggatttgaaaatgttttatatattaataCACTGGCTAGAGGAAGCTTTGGTTTAGAAAGCTTTATTAGAAAAAAGATGATCATCTTACAGTGTTTTGCTTTTACTTTGTTTCAAAAGCTTGATTTTTACCTAATCTGCTCTAACTACTTATAGTGAATATCTGTCAGGGTTGAAAACTGAAACTGATCCTAGATTTGTGTAGTCTTGACAAGTCCTGTGACTGTTTATGCAGACCTGAGATTATCTGAGCTCCTATGTTAATCCTAATTTTCAATTATTAATCTGCCTTTCGGGCttcattttaaatcaaacatCTGTTGAAATTCCATGTTAAGACCTGAAAAGTGCCATCGAACCGTccaatagtgtttttttttttttgtttgttttttgctccCTTCATTCCTTTTAACTTGGAATTCCAATTCACTTGAAGAACTGGAAAACATTTCAGTCTCAAAGTGTGCTATTTCATGAGTGTGATGACATGCAAATCATTTTGATGACCTCAGACACTGTAGCCAATCTCAACCAATCACACACTGTCATCACAGCTTTGATAGTGTTTAAAGGTAAGGATacagatgcattttttttacagtgtatgtaTGATTTGCTGAAATAAAAGCTATATTGACCAAT
>XM_039798470.1
CGGTGCCATGCGCGTTCCCGTTTACTGCTGCGCACAGACAGCCGGTgcggagagagaaagagagatagagagagagaggagagggctGTCATAACTAGTGACAGAAAACGGCAGCGAGCACATACAGTCTGGATAGCAGCTGATGCGACAAGATGCTGAGCGTCGCCTTGCTGTGTGTGTACGCCGTCGCCTTCGGACACGTCTCCGCTCGCTCCGACAGCGGCAATTTTTTGGATGATAAGTGGCTCGCTGGGAGATGGGACAAATTCAGAGATGAGCCTGGAACATGGACTCCATCCAAGCCCTTCGATCAAGgcCTTGATCCAGCCAAAGACCCCTGTCTTAAGATCAAATGCAGTCGCCACAAGGTGTGTGTGGCTGAGGATTCTAAGACTGCCACTTGTGTCAGCCAGAGGAGAGTTAGTTTTAAAGATGCCAGTTTGTACCAGAGTCCAGGGTCGAAGTGCAAACCCTGCCCTGTGGTCCACCCCTCTCCTGTTTGTGGAACTGACGGCCACTCCTACTCCACCAAGTGTAAGTTAGACTACCAGGCATGCATCACAGGAAAGAAGATCGCTGTGAAGTGTTCTGGCATGTGTCCTTGCCCCTCTCAGCCTGAACAGAGCTCTGCAGAAAAGAAAGTGTGCAGTGAGTCGGATCTGAAGGAGGTGGTGAGTCGTCTGAGAGACTGGTTTAGAGTGCTGCATGAGAATGGCAACCACAAGAGAGTCAAGATCCAGAAGCCAGAGAAAAACAAGTTTGAGGTCGGGGCGTCACCTATTTGTAAGGACCCTCTGGGCTGGATGTTCTCCCGACTGGACACAAATTTTGATGTCCAGCTGGACCAATCGGAGATCCAGAGCCTCTACCTGGACAGGAACGAGCCATGCTCTGACGCGTTCTTCAAATCCTGCGATACACGCGCCGACAATGTTATAAGCAGCTCTGAGTGGTGCACATGCTTCCAGAGGTACACAGATTCCCCTTGTAAAGCAGAGCTGTCCAGTGTCAACAAAAAGCAAGCAGGGAAGAAACTGCTTGGTCAGTACCTGCCATCCTGTGATGAGGAAGGTTACTATAGGTCCCACCAGTGTCACAGCAGCAGCGGCCAGTGCTGGTGTGTGGATCGCTATGGCAACGAGGTGGCCAGCTCACGCACCCATGGCCCTGCAAACTGTGGCGTGATATTGGAGTCTTCTGGAGACCTCGGCAGCGGAGACTCGCTGTTCACTGCTGACGATGAAGATTCCTTTGTGCTCAACGACCAGGCTGGGATGGACGATGAGGACGACGAAGATGAGGATGATGACGATTTCAACGACGAATATCTGTCGTaatttcaaaaaagaaaagaaaaaaagagaaaactgtTTGTTTGGTCAAACTGCACGTTTCTAGGTGACTCCCCAGGCAGATACTTAATCGTACTAACAGCCTATGGACTACTCTCTGTGTATTGTTTGTtcataagttttaaaaaacacacaaaaaaaaatatatttctggcaaatgtttattatttctcttcctctttaagTATACAATATTATTGGTTAATGGCACTTGTTCACTTGTGTGTCAGCCAACCAGAGAACATGACTAAGGACTAATCGACAAACCAATCCCGTGCTTTGGATTTGGTCATGTGTGCAAAGACCTCTCCCTTCATTGGACAGTCCATGTCTTCTAGTGTGTCCTGTCCTTATGCAGCACTCTGATGCCTGAGTGTGTTGATGCCTAGGGCGCAACGTTAAAGAGATTTCCCCCtcttcattccttcatcctcttcctcccctccaCACCCCCGCTCCCCCACCCTGTTACTCCTTATCAAATGTTCCTGTGTATAGGTGGGATGTTGATGATGTAGATAAGAGAATATTGCACTCTTTAGGTTTCTTTTGATCTTGATttgtaactgtgactgtaactgtgtGAAAAAACAAGATAACAGTTAGACATGCTTCATTAGGAGAATTAAGGCAAAAAACAACAGTGCAAGTTGGATAACAATCAGAACCGACATGCTTGCTGttttcacagagacacaaatcAAGTCAAATCATCTCAAAGGCTGAGCAACGGGGAAAGACAAATTACTGCTTGGCTGGTGGTGTTAGGGGGAAAATGTTATCTATTTTTCTAATCCATTGTCGGACGAATACAGAAGATGAAACAGATTTGTCGTAGCATGTCTAATACTGTGTGATGTTGTTTCAGTCTGTAGAACCAGAGGCTAAAACCTTTGTGGAACTCAAAacataatgttgcttgaggggGGAAAAATTCCCTCAAGCGTGTACAGATGAAACTGCACTTGCATAGTTATAAACTGTTTAAGCCACAAGTCTGTctgataatttaaaaaaaaaaaaaaaaaaaagttgactgACCTTTAATATATGTCAGTGAGCTCAAAGAAAACCTCATCACAGCTCAGAAGTGGAGGTGATGTTTTAACTGTTCAGATATGAGTCATAACATGATTTGAGCACACAGTGTAACAGAATAACTCTCTTCTTGCACAGTAATAAAACCACAGAACCATGCAGACCTGTTAAAATGTCTGGCAGGGGATAAAGGGTGAGGTGTGCCTTTTACCGGTGAGGACAGATGGTGGAGATGGTGTGAGAAGCATGCGTTACTGGACTGACTTTAGCTTGTTATTACACTGCATAAGAGTGGCATTACTGTTAAAGCTTGGATACTATTTGGGTTTTGGTATGGCTTGTGTTTTGGGTCGCTCTTACGATGGTGTTACATAGGCCATATTTCAGATCTTTGATTTGTTACATAGGATAGCTAGAATGTAGAGAAGCACAGATATACTTAGCAGTTAAGGCATACAAACACTTAGATTCTGCtggatttgaaaatgttttatatattaataCACTGGCTAGAGGAAGCTTTGGTTTAGAAAGCTTTATTAGAAAAAAGATGATCATCTTACAGTGTTTTGCTTTTACTTTGTTTCAAAAGCTTGATTTTTACCTAATCTGCTCTAACTACTTATAGTGAATATCTGTCAGGGTTGAAAACTGAAACTGATCCTAGATTTGTGTAGTCTTGACAAGTCCTGTGACTGTTTATGCAGACCTGAGATTATCTGAGCTCCTATGTTAATCCTAATTTTCAATTATTAATCTGCCTTTCGGGCttcattttaaatcaaacatCTGTTGAAATTCCATGTTAAGACCTGAAAAGTGCCATCGAACCGTccaatagtgtttttttttttttgtttgttttttgctccCTTCATTCCTTTTAACTTGGAATTCCAATTCACTTGAAGAACTGGAAAACATTTCAGTCTCAAAGTGTGCTATTTCATGAGTGTGATGACATGCAAATCATTTTGATGACCTCAGACACTGTAGCCAATCTCAACCAATCACACACTGTCATCACAGCTTTGATAGTGTTTAAAGGTAAGGATacagatgcattttttttacagtgtatgtaTGATTTGCTGAAATAAAAGCTATATTGACCAAT

Function

symbol description
spock3 Predicted to enable calcium ion binding activity. Predicted to be located in extracellular region and membrane. Predicted to be integral component of membrane. Is expressed in cardiovascular system; nervous system; and neural tube. Orthologous to human SPOCK3 (SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3).

NR:

description
PREDICTED: testican-3

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K08136 SPOCK; testican

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039798462.1 True 3516 mRNA 0.43 12 27424468 27442182
XM_039798470.1 False 3507 mRNA 0.43 11 27424468 27442182

Neighbor

gene id symbol gene type direction distance location
dlc1 dlc1,LOC102301936 coding downstream 26375 27304874 ~ 27398093 (-)
doc2d LOC103137889,LOC108231647,LOC103360491,LOC103467252,LOC106520895 coding downstream 150704 27200983 ~ 27273764 (-)
tmem134 tmem134 coding downstream 229977 27190371 ~ 27194491 (-)
LOC120560356 aip coding downstream 235823 27184109 ~ 27188645 (-)
ankrd49 ankrd49,LOC102800147 coding downstream 296282 27116040 ~ 27128186 (-)
prss12 prss12 coding upstream 158931 27601113 ~ 27623879 (-)
adra1d adra1d coding upstream 254439 27696621 ~ 27706851 (-)
lrrtm1 lrrtm1 coding upstream 571619 28013801 ~ 28017392 (-)
suclg1 suclg1 coding upstream 1212078 28654260 ~ 28675083 (-)
si:dkey-162b23.4 slc9b2,LOC103369775,LOC104953002 coding upstream 1238791 28680973 ~ 28697859 (-)
G8164 NA non-coding downstream 13004 27410049 ~ 27411464 (-)
G8158 NA non-coding downstream 127589 27295844 ~ 27296879 (-)
G8087 cdk2ap2 non-coding downstream 240783 27180034 ~ 27183685 (-)
G8081 NA non-coding downstream 332714 27091469 ~ 27091754 (-)
G8037 NA non-coding downstream 463552 26960423 ~ 26960916 (-)
G8180 NA non-coding upstream 34618 27476800 ~ 27483406 (-)
G8182 NA non-coding upstream 61516 27503698 ~ 27503906 (-)
G8216 mettl14 non-coding upstream 182976 27625158 ~ 27631148 (-)
G8225 NA non-coding upstream 205951 27648133 ~ 27648707 (-)
G8245 NA non-coding upstream 304992 27747174 ~ 27747449 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 129557 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 845653 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 888732 26533833 ~ 26535736 (-)
adamtsl7 NA other downstream 1302819 26112014 ~ 26121649 (-)
polq LOC104947247,LOC104947243,LOC106593755 other downstream 1330224 26075397 ~ 26094244 (-)
rnf24 rnf24,LOC102778784 other upstream 1863839 29306021 ~ 29339847 (-)
G8701 NA other upstream 2147126 29589308 ~ 29593623 (-)
bnc2 bnc2 other upstream 3133690 30575872 ~ 30744878 (-)
G8975 NA other upstream 3529206 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 4492455 31934637 ~ 32006542 (-)

Expression


Co-expression Network