LOC120558174 (ubn2,LOC103364441)


Basic Information

Item Value
gene id LOC120558174
gene name ubn2,LOC103364441
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 22000268 ~ 22020435 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799111.1
AGTGTGTGCTGGTGCCATTGTGGAAAAATGCACAATTCAGCATTTTCCTGAATAGACATAAAGAAAGGCTTCAACTGAAAGCTGTCGATTATCGATATCTGGATACACAGCGTGTCGTGTATGTATCCCAGAGCCTGTCCTTCACTCAGACACTATATAAAGGTCATAATAGAACTGGCAGTGTTGTTATTATCGCCTGTTGTGACAGAGGCGGGTTTAGGATCGGGGCACGCGGTGATTGGACGTGACGAGCCCCCACTGTGTCACGATGCTTCAGTTTTGTGCGTACGCGCAGGCGCAGCGACCCCTCTCTTCTGATATTTTATTTACTCCCGAAACCCAAGATGGCTCCTGTGAATGTCTCGGTCCCATAGCAAATTGAGGATGCAAGTAGCTGTCGTAAATACAACTTTTCCCCGACCGTCGCATCCCCTGGAGTTCAATTCGTATGGTGCGGAGGAGGCCGTAACATCCGTCTAGGCATTGAGCAGCCGTCGGAGCTTCGCGAAACCTTCTTCAATCCACCAATTTGGAGTAGTTTCGCGAAGTAACGTTAGCTCTTCTCCTCGCTGTCTGTCCGGAGAGAGGTTCAGGCAGCTCATCCAAATGGCCGAACCGAGAAAAGTGCAATTTGTCACCCTCTCGGCCTTCGCAGCTGGAGCAGCCGCGGAGTCTAGGAAACGCCGGCTGGAGGATGAGGCCGACTCCAACTTCGGTGGAGCCGGGGAGGTCGAGGCAGCGACCGGGGCAGGGGGTGCTGCCAGCAACGGTCGTCTCGGCAAAACCGGCGACAGGGACACGGCTGTAGCTGAGAAGAGGGCGACGGTGCGGCTCAACCTGTCCCTACCCGAGCCTGACGACCGCTCCTCCGCCGAGTTTAATTACGGCGAAATCATCCAAAACCTCCAGGCAAAGAATAATCCTCCAAGTCTGACTTCAGCCCACAATCCCAACAACCCCTTCGACGATGACGAGAGCGAGCGGCTCCAGGTTGAGGCCCTGGCAAAAaagttagaaaataaatatggtaacacagagaagaagaagaagaaggacagAATGCAAGATTTGATTGATATAGGCTTTGGCTACGACGAGACAGACCCCTTTATTGACAACTCAGAAGCTTATGATGAGCTGGTGCCTGCCTCTTTAACTACAAAGCTTGGGGGATTTTACATCAACACTGGCACGCTGCAGTTCAGAGCGACCTCCGACTCCGAGGGCGAGGAGGACAAGAAGCTGAATGACAACAAGGAACAGGTGAttaagaagagaaaaaagaaggaagTGAACAATCTGGAAGAGAAGAATGCGAAGAAGAACAGAGTACCTCAACAAGGCGTGACAGTCCTCAATCTCCACCggccagagaagaagaagaggaagaagctgATGAAGGACTCGCTGTACCTGGCGGCCATGCTCCGCCGCTTCACCCgggagaaggaggagatgaGGAAACGACAACCGAACATGGCTCACCCCGGCCTGGCAGGAGGTATGGCTAACAAGGCCCACTCCACCAACTCAACGAACCACCTGTTAGCCTCTAACTCCACCCACTCACAAGGCAACACAGCCAGCAACGACTTCTCACTGGCAGACCTCACCTCGGACCCCGCTGTAATGTCACTGCTGGGCTCGGCCAATGAGAAGGAGCTGCAGGATCTCCTAGGCGACCTGGACTTTAGCGTGTTGGACACTGACCAGCAGCACGTCATGGTGGCGGCCAGGGAGAATGGCATTCTGGGAGTAGGTGTTCCGGCCCCTAAAGCAGCAGCAGGTGGAGGGGGCCAAGGGCGAGGCCTGGGTTCTTCCAGCGGACTGTTTTCTCCGCCTCCGCTGCCTGATGGGCTGCCTGCTCCTCTTATTAAACGCATCGAGGACCTGCGGGCGGCCTCGCGGCAGTTTGATCAAGAGGGCAGGAAGAAATTTTTCACCTTGGACATGAATAACATTCTCCTGGAcATTGAGCTGCAGGTCCAGGAGCAACCTCCTGAGGTGCGTTCAGGCATCTACTCGCACATGGAGGCATTTGTGCCATGCAACAAAGAAGCCCTCCTCAAGCGCCTGAAGAAGCTCAGTCTCAACATCCAGgaTGATCGCCTACGGACACCGCTGTTGAAGCTGAAGCTGGCAGTGTGTAGTGTGATGCCAGAGCAGATAGCCAGATACAACATGGACTGCATGGCCAAGGTTGCAAAgCAGCAGTCGGAAGATGGGGATAAGAACGGCTCAGAGGAAGAAGATGAGGAAAAGCCTGGGAAAAgggtgatgggcccacggaagaagtTTATCTGGGATGATAAGCTCAGgAACCTGCTGTGCGGCTTGGTGCGAGTGAAGCTGAGCTGCTACGAGATGGAAAACCAGTGTTCTCTGTCTGTGGAGGACTATCTCAAGGCCTTCTTAGAGAATGAAGTCAAACCACTATGGCCCAAGGGCTGGATGCAGgccagGATTCTGCTCAAGGAGAGTCTTTCTGTTCACAGTCACCTCACTGGAAACCTAGTCAAGAGGAGAATGGTGCCTGGGCCCAAGGCCAAAGCCAAGGAGGGTGTTTGGATCCACAAATCACCTCTCACCATGACCTCCACTCCGTCTCTGCCCACCTCCGCAGTAGCTCTGACCTCCACCCGCCAGCCCCCCTTCTCCTCTTCGCCCCCAGAGCCCATCTGTCTGTCGGACTCACTGGATGAGGATCTGACtgctccctctctggactcCATCTCCCACGCTCTGGCCCTCCTCAACAATGCATCTAAGGGAATAAGCCTCTCAGACAGTCCCTTGTCACCCCCACCCCTGCAAATGCCCACCTCCTCACCTCCCCCCGTCACCCCTCACTATCCCTCAGCCTCTCAGCTCTCTGCCTCGATCGCATCCACAACGCAGCAACATTCCCTGTCTAAGGTGGAGAGCACTCCGCTGGCAGCTGCGTCTGCTGGGAACTTGCCAACAACAACGCTACCAACCTCCTCTTCtacctcctcttcctcgtctCCCACGGTTTCCTCCTTAGCTCGTGTGCAGGCAGCAGGCCTGTCGCTGGCCTCCAGGACTGCAGGTGGCCCCTACAGCCTGATTAAAGCATCTGGCACCATGGGCCAAACCCAGACTCAGAGAATTGTTACCATGGCATCATCCAATCACACGGAGGCGAGCTTGTGTGGCAAGATGCGGCCACACGGGCCCAAAATGCCCTTCCCCCACCCACCAGCGGCCCCTCCCACAGCTTCTCCTTCTGCCCCCCCATCAGAAGGGGCCTTTGGGCTGCTGGGCAGGCTGGGCTACCCGGGAGCCCCGCGAGTGGCCAAGAGCAGTGCCAAAGCCAGTGGCATCCACAGCAATGGCAGCGTGAGCAGCAGCATCACACCTTGTTCCTCCCCCTCCTCACTGTCCCGCTCCAACTCTACCACCCACCCTGGCCTGCAGTCCTTCTGCCCTCCCTCCCCGGTGGCCTCCTCGCCATCCCCCACCTCCCATACGTCACACTCCTCTCAAGGTAAatcccacacacaccaccaccaccaccaccaccaggccAACTTCATCACGCCCATGCAGGCCACCCTTACCAAGTCCTCCCACAGCAGCAACTCCTCTCCCATCATAAAGCTCACCCCTCGGCCTCCTGCGCCCACCCCACCTCCCTCACCCTCCCCGTCATCCTCGCCGTCACACCCGCTCTCCCATCAGATGATCCCTAGCCAACAGCAACAACACCAATACTCCCCCAAAACCCCCAAACCTTTTCGGCCCCCCTTCAGCGTATCGGGTGGCGGGCAGGTGAAGCAGACGCAGGGCAGCTTCAGCTTCGCCGGAGGCCAGAAAGCTCAGTCCACGACGAGCAACAGTAGCATCACCAACAACTCCATCAGCAACAAGGGAGTGATATCAGCTCTCTGCAGTCGCCCAGACAAAACTCCCCTGTCTTCTGCACCTTCAGTCTCAGCCAACCACGGGCAGAGGCAGAGGGTGGTGGGCGGGGCTCAAAGCTCAAAGACAGGAAATGGTTGGGCGGCTTCAGGAACTTTGGCCACGTCCTCCACAACGTCACACCTCTCACAGGTATCAACAGCAGGCACTTCCCTCCTGGGCAGCCCCTCAACTCTGCCCCTGGGCTTTGGGATGTTGGGAGGCCTCGTGCCTGTCTCGCTGCCCTTTCAGTTCCCCTCGTTGCTCAATTTCAGCCCACCTGGAGCCCCCGGGGCCGCTGGCATGGGCTCAGTCCCCAGCTCCAACTCAGGATACACCCTAGCACAGAGCGACCTAATGGATCTGTATAAGAGTCTCCAGTCAGGGTCGCAGGCAGCCCTACCTCCTCACTTGCAGCTTGCTTTCTCAGATGCGAACCAAAGCCAAGGTGGAGACATGAAGAGGAAATCCCACTGACCAATAACGGCGCAGGAGGCCGACACCAGCGGGGTGACATCACAGCCTCCTGGACACATCTACCAACAGGAATCTTCACTCTGATTGACTGACACAGTGATGTGGTATGAGGGAGCGGGGCTCCACTGCCTCTTTTAAAATGGACCTAAAGGAGAATCCGTTTATCCTCGCTACAAGTGGCAATGATGAATTAATTTAACTGTATTTTCTAATGAACCGGGTATGAGAACAAGACTGAGTGAATGACGAGAACACCTTTATTTTTGTTCagcttattttaatttttttgtcaacatgtttacatatgacTGACCTTGATCACTGTGGAATGAGTGTGAGCGAGGTGGTGGTACAGATGAGAGTAGTAGTATGCTACGTAATATAATTTGTATTTAAGCTATTGTGGAATAACAGGACTCTTGTTCTTGcagtacaaaaagaaaaaaaaaaacagactgagttatgaatttttatttttctgtctttttgggAATCGT

Function

symbol description
ubn2 Predicted to be involved in DNA replication-independent nucleosome assembly. Located in nucleoplasm.

NR:

description
PREDICTED: ubinuclein-2-like isoform X1

GO: NA

KEGG:

id description
K17492 UBN; ubinuclein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799111.1 True 4895 mRNA 0.55 18 22000268 22020435

Neighbor

gene id symbol gene type direction distance location
cygb2 cygb,LOC104922950,LOC103373403 coding downstream 123010 21856670 ~ 21877258 (-)
LOC120557332 NA coding downstream 181825 21812708 ~ 21818443 (-)
LOC120567942 sphk1 coding downstream 208152 21755292 ~ 21792116 (-)
aanat1 aanat,LOC102776855 coding downstream 293417 21703381 ~ 21706851 (-)
ten1 ten1 coding downstream 351362 21645797 ~ 21648906 (-)
ttc26 ttc26,LOC102798810 coding upstream 1809 22022244 ~ 22033208 (-)
slc25a38b LOC103364442,LOC107382263,LOC108242715,LOC106515296,LOC105939773,LOC103153186,LOC101165446,LOC106917329 coding upstream 21290 22041725 ~ 22051538 (-)
LOC120565705 NA coding upstream 32575 22053010 ~ 22085472 (-)
map2k7 map2k7 coding upstream 75525 22095960 ~ 22111807 (-)
pkn1a pkn1,LOC103364445,LOC108242730,LOC107382353,LOC103383564 coding upstream 94681 22115116 ~ 22171674 (-)
G6654 NA non-coding downstream 23120 21968847 ~ 21977148 (-)
G6653 NA non-coding downstream 24027 21968004 ~ 21976241 (-)
G6618 NA non-coding downstream 152635 21835827 ~ 21847633 (-)
LOC120568701 NA non-coding downstream 188345 21811200 ~ 21811923 (-)
G6617 NA non-coding downstream 237962 21762097 ~ 21762306 (-)
LOC120568056 NA non-coding upstream 14850 22035285 ~ 22040931 (-)
LOC120569580 NA non-coding upstream 18574 22039009 ~ 22039151 (-)
G6731 NA non-coding upstream 70065 22090500 ~ 22091557 (-)
G6764 NA non-coding upstream 243949 22264384 ~ 22265992 (-)
G6762 ddx39a,LOC103150096 non-coding upstream 304115 22324550 ~ 22325383 (-)
G6592 ube2o,LOC106534564 other downstream 290456 21708540 ~ 21709812 (-)
LOC120566957 NA other downstream 431209 21563091 ~ 21569059 (-)
LOC120574674 NA other downstream 1806930 20187281 ~ 20193338 (-)
spink4 NA other downstream 1955542 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 2203746 19766497 ~ 19796522 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 308084 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 644940 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 961490 22981925 ~ 22988500 (-)
G6924 NA other upstream 1068065 23088500 ~ 23164937 (-)
G6943 NA other upstream 1193421 23213856 ~ 23242290 (-)

Expression


Co-expression Network