LOC120558365 (gpr108,LOC107090075)


Basic Information

Item Value
gene id LOC120558365
gene name gpr108,LOC107090075
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 13610299 ~ 13623167 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799341.1
CTTGCTTAATGTTTGGTTCTTGATTCGAGACCCGGAAGCCAGATTGCCACCTACAGAGCTATGCTATGAAAGCACAAAAGAACCGAAAAACATTACATAAATGGTTATAATTTGTTTATACACGACGCAATTAAAGAACCGATACACTGGATTTAACGATCAACATCACTGTAATTTACCTCCGTTATACCGTTTAGGCTGCTTGCTAGCTTGCTCTTTAGCCATCTGGCAAGATTGTCGCTTGCTAACGTAAGCAGTTGGTCACCGTTAGCAAGTTGGCAATGGCTGTGGCGCACAGAGGTTGTGTTTTGGCTGGATATTTACTCCTACTACTGCTGGCTGGGTGCAAGGCGAGAATACATTCGCTCACCCTGAAGAATGAAACTCGGTTTGCTGTCGACCTCAACACCTTCGGTTTCTATGCTAACGGGACTCTGGATGTCAACCTGGTTTCTCTGCGCCTTCCAGACCAGCCGGTGAACTACAGTTATTACCCTGTTGGTTTCAGCCTCTCCAGGTCACGTGTGAATGGAGTCCTGTCTTACACAgcagaggagacagagacatgCCCACTGACACTCACAAAGTTGACCAGCACCGAGCCTCTCATTCTTTTCCTTATTGATTTCAACGCACTCAGtgtcAATGTGAGAGCTATGGGTGAACAAGACAACATCTTGAGAGGAAAGCCAAAGGCTGAAGTGCCTAAAGGTCTGAGGAAAACCAGGGAGGAACCTGCTAATGCTGCCAATGCGCCAAATGGGAATAAACCATCAACAAATGGGGACAAAAAAGCAGATGACCCAGATAATAAGTTGAATCAGGACGAAAAGGATGACAAGTCTGTGGAGCCGAATAAAGAAGttcagaaagaagaaaagcCGGAAGTGGGAGAAACTGAATTCCAGCTTGGGAAGAACAAACAACTGACTTTGGCTCTGGGCAAAGTTAACGGCTCCTACAACTTCAGTTTCCACATGGTGGTCGGCTTGCTGGCGGAGGGTCTGTACAGCCTCAAGTTCCACTACTGTAAGAACAGGATGGCTGGAATCAAATTCCCCTACTCGTTCTCTGTGGAAGTGACAGAGGTGAATCCCGACGGCTACCTGTCTGCAGCAGAAATTCCTCTGTCTCGCCTTTACATTTGTATGGCTGGAGTCTTCTTCACTGCTGCCATGGTCTGGGTCTACACACTCATGAAGCACAGgtACAGCGTGTTTAAGATCCATTGGTTGATGGCAGCACTGGCCTTCACCAAGGCCACATCATTGGTTTTCCATAGTaTCAACTATCACTTCATCAACACTAAGGGGCATCCTATTGAAGGCTGGGCCGTCATGTATTATATCACACACCTGCTCAAGGGGGCACTCCTGTTCATCACACTGGCACTGATTGGCACCGGCTGGGCTTTCGTTAAATACATCCTGTCTGACAAGGAAAAGAAGATCTTCATGATTGTCATCcctctgcagGTCCTGGCTAATGTCGCCTTCATCATCATCGAGTCTACGGAGGAAGGTTCCAGTGAATATTATCTGTGGAAGGAGATCCTCTTTCTGGTCGATCTCATCTGCTGCGGAGCCATCCTTTTCCCTGTTgtctgGTCTATCCGTCACCTACAGGAGGCTTCTAGCACCGACGGCAAAGCTGCCATGAATTTGGAGAAGCTCAAGCTCTTCCGGCATTATTATGTCATGatTGTGTGTTATATCTACTTTACAAGGATCATAGCAATTCTGCTTAAGGTCACTATGCCTTTCCAGTGGCAGTGGTGCTATGAGtttctggtggaGGTGTCTACTCTGGTCTTCTTTGTGTTGACGGGCTACAAGTTCAGACCAGCGTCCAACAACCCCTACCTTCAGCTTCCCCTGGACGAGGAGGACGTAGAGATGGATGAAGTAATGACTGAGTCAGGTGCACTGGAGGGCATTTCCAAAGTCAAGAAAACCTGTAACGGACGCGAGCGCCAGAAAGAGTCCACCTTGTGAGTGGGAAGCTCCATCTTTGGGGGTGGAGGACCCACTAAACATCCCCAGGCCAGCTGGTACAAAGGGGTGCACACGGACCAAGGCTCCCCACCCCCAGTGACGGCTTTCCTTTTGAAACTCTTAGAGTGGTTGCAGCGGTCGTGTCCACTGTCTGgctatgcaaaaaaagaaaaagaaaaaaagactgacTTTGTTGGACGCTCTCCATTCCCTCGGAACACTCCACCCAGAAACTCTGTAAGGTTTCAGAAGGAGACGAGCTCCCGTCACATGAATGGGTGGAGACATGGAAAGGAGCTCTGATGTTctttagttttcatttttttt

Function

symbol description
gpr108 Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and membrane.

NR:

description
PREDICTED: protein GPR108

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K22986 GPR108; G protein-coupled receptor 108

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799341.1 True 2321 mRNA 0.48 18 13610299 13623167

Neighbor

gene id symbol gene type direction distance location
soul5l LOC104926857,LOC103375185,LOC100694454 coding downstream 2478 13598730 ~ 13607821 (-)
LOC120558389 LOC104933357,LOC103367030,LOC103383226,LOC100692841 coding downstream 135740 13428440 ~ 13474559 (-)
LOC120568624 LOC107104464 coding downstream 194626 13408733 ~ 13415673 (-)
LOC120564537 NA coding downstream 206154 13393147 ~ 13404145 (-)
LOC120564530 NA coding downstream 218264 13384811 ~ 13392035 (-)
LOC120558503 NA coding upstream 7427 13630594 ~ 13632316 (-)
LOC120558275 NA coding upstream 27583 13650750 ~ 13658617 (-)
micall2b LOC103369616,LOC102192527,LOC102076226 coding upstream 164042 13787209 ~ 13805843 (-)
si:ch73-12o23.1 LOC104949822,LOC100695517,LOC102295315,LOC101478649 coding upstream 189091 13812258 ~ 13829038 (-)
LOC120558306 LOC103369617 coding upstream 206783 13829950 ~ 13841635 (-)
LOC120558524 NA non-coding downstream 74051 13520001 ~ 13536248 (-)
G4115 LOC101079010,LOC105939483,LOC106946826,LOC103153258,LOC106910155 non-coding downstream 118302 13487920 ~ 13491997 (-)
G4066 NA non-coding downstream 338125 13195046 ~ 13272174 (-)
LOC120567935 NA non-coding downstream 457453 13151720 ~ 13152846 (-)
LOC120567932 NA non-coding downstream 458676 13138058 ~ 13151623 (-)
LOC120558530 NA non-coding upstream 142026 13765193 ~ 13767856 (-)
G4354 NA non-coding upstream 422193 14045360 ~ 14045719 (-)
G4359 NA non-coding upstream 432276 14055443 ~ 14056457 (-)
LOC120558581 NA non-coding upstream 444681 14067848 ~ 14071547 (-)
LOC120558586 NA non-coding upstream 455150 14078317 ~ 14078999 (-)
G4168 NA other downstream 43033 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 570019 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 581906 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 744260 12865968 ~ 12866039 (-)
trnac-gca_2 NA other downstream 747698 12862530 ~ 12862601 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other upstream 395735 14018902 ~ 14042510 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 1088977 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 1277979 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 1803377 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 2722551 16345718 ~ 16347922 (-)

Expression


Co-expression Network