soul5l (LOC104926857,LOC103375185,LOC100694454)


Basic Information

Item Value
gene id soul5l
gene name LOC104926857,LOC103375185,LOC100694454
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 13598730 ~ 13607821 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799493.1
GAGCTCGCGGTCTACTAAACACAtagcatgtatgtgtgtctagtGTTGGTCCAGTAGTTTGCAGGCTGGTGCCAGCTCAGCCCCTCCCTTCCTGCGAGCTTAAAGGCGGACGCTGGTCCTCGCTGCAGTCCGCAGTAAACTCAGCGGTGCCTTCAGAGTGCAGCAGACTGCAGACTCCATCACACTCCATCACACTCCACCTATCCTCCGCTTCTTCCCCGCGCTGCCATGGCAGGTGGAAAGGACACACACGGGGCCGGGACAATGGCTTTCATCTCAGCCTTGGCGTTTTTGGCTCTAGTGGTCTCTGCTGAAGGAAGTGTTGGACCGAGTACCAACGGCAGCTTTTGCACCGAGTCAAAGGAATGTCTGGAATATCAGCTGGTCTGCAAAACAGATGAATATGAGgtgcgacACTACAGCCCCACTCGCTGGGTAACAACAGATGCTGAAGCCTATTTCATGGGCGTGGGTGCAGCAATGGCTTTCAGGAGACTGTTCCAGTACATCACTGGCGCCAATGAAGAAGGCATCCAGATGGAGATGACCGCCCCTGTCCTGGTCAAGATCCCAGAGGAAACCAAGATGTGGGAGCCGGCTATCTACTCGCTCAACTTCCCACTGCCGGCAGCCTATCAGGAGAAGCCGCCTGCACCCACCAATGAAAAGCTGTATTTCACCGAGATGCCAGAGATGGATGTCTATGTGAGGAGTTATGGAGGCTGGATGCTGTCAGTCACATCCAGGCTTCACGCTCACCTGCTGACTAAAGAACTGGGGAGAGTTCGAGCTTCCTACAACCACAGTTACCACTATGGAGTTGGCTATGACAGtccctTGAAGCTGTTGAACAGGCACAATGAGGTGTGGTATGTGGCCGAAGGGGAGCCAGTTTGCACAGATCCACAGGAGCCGACCCCTGCACACACACCCCGGCCGACTCAGACCAACTCCCCCCCAGACTCTCCGTCTGACCCTCTCCCACACATGCTCTCTGATTCTCCCGCACTCCCTCCCTCCAACCTATCCTCATATGCCAGGTCCAACTCTTCTTCACAAACGCCCTCTGACACACCATCTCTCCCCCCATCTAATGCTCCACCTAGTCCTTCATCCAACCTGCCCGCTGACGCCACATTCAGCCATCCCCCCACCTCCTCCCAGATCCTGCTGGACCCGACCACCAACTCTTCCACCCCCGCCGTTGTGAACCCGTCCCTGGAGCCCCAGTCTGATGCCGCCCTGTGGAACAGCACAGCCCACAGCTCTCTGGGTACACAAGCTGACAGTAACCCTGTGACCGAGCCAGACAACGCTCATTAGCAACAGTCACATTTGATTTGAGCAGCTATTCCAGGTATACTAACATGGAAGTTAAATAGAATAGAAGCAGTGGAGGTGTTGCAGAAAAATGAGTGAAAGTGTGTGATAGACAGACAAGCTATTATCTTCCTCCTTAATCTCTCTATCCCTGTGTAATACACTTACTCCTTCTTATGGCACTTAGTGTTTAGCTATATGTTCGATCACAGCTTTGCACCTGCAGCTTTCTGTATCAGCAAACACAAGCCTGTCCACGTTGTCGTTCTGAGCTTGTCATACAGCTGCATCATTGAATTAAGTAGATGTATGTATTAGTTAGAAAGTTAGAATTCCAGATTATTGTGTTTATTGACCCAGCTAAAGCGGAAGGCAGGGATAGATGCCGTTTAACATCGGTTTAATCCAAAAAATAACTCGGAGGAAACTAAACAATcagtgtgtacagtgtgttAGTATGATGCTGTAAttagtgattttttttgtgCCACTATATATTTACAGCCATAACATCCTACAAAATTCTACTCTCTGTTTAGATTCATGTCAGTTAATTTCATGATATTTGTGGCAACATATTGGTGAATCATTATAAATTCAGTGTGCACATGCATTGGGATCTTTGGTGTGGCCTTAAACCTAAGTGCTAATACTTTATAGCTCTATATAATAGTAGtttatgaagttttttttaacttgggATCAAAACTTTTTTCCAAGAATTAGAGCTCAAAAGTGCCTGTAAATTGAATGGCCTTATGTTTTGCAAATTTGCCATCTCAGTATTTTTAAATGATTACAATTACACTAACCAAGTAGCCCAAGTTTTTTGGGCTACTAGAATTCAATGAACATATTTACAAGAATAAAAACTTATGACACAAGGGTTATTAATAACAGAGTATGCTATGTACCAGAAAGTGGCTTGTTGATAGATCTTCCCTTAATTTCACTGTCAAAAGGTCAGCAAaaatcaaatattacatattttagcATCTTTAAATATCAGTAAGTCTAATCCACATAAGACAATTCTAAACCtatgtgtaaaaatgtaatatttgagaTAATATACTAAGATTGATTTTTATTCCTGCTTACTTAGACCAAAATGTCTCATCAATTAAGTCGGGGTTGACCATTATCTAACCCTAATAAGTAgaaatgtgaagaagaaaaagatggcAAGAATATCTAAACAATGTTGGATTCATACACTTTCCAAATGTTTGTCAGGCTTCAAGGATGTAAACAAAGGGTTTTGGTAAGATATGTTGAATGTTAACAAAATGTGTTAGTTTCCAAAGGAAATCCCACAGGGTACCTTTAACTTAACTTAGCTTTTGCACACAGTACAAAGTAAGGCCCTTACTCAATTCTGCCCAAATCACTTTTCTGTGTATCTATACCTAGAAAATCAGTCCACAACAATCCCGTATCTTCATCTAGACAGGAAGGACTGCCCCAAAGATCCCAAAGAGTCATGCCTGATAAACCAATGCAATACAAGTTACATCAGTTAATAAATCTATCTGTCTCTGAGCTACAAACTGTGTTTTCTGAGGAAGGTGCAATAAAAAACCATAAACTCTT

Function

NR:

description
PREDICTED: uncharacterized protein LOC104926857

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799493.1 True 2913 mRNA 0.44 7 13598730 13607821

Neighbor

gene id symbol gene type direction distance location
LOC120558389 LOC104933357,LOC103367030,LOC103383226,LOC100692841 coding downstream 124171 13428440 ~ 13474559 (-)
LOC120568624 LOC107104464 coding downstream 183057 13408733 ~ 13415673 (-)
LOC120564537 NA coding downstream 194585 13393147 ~ 13404145 (-)
LOC120564530 NA coding downstream 206695 13384811 ~ 13392035 (-)
LOC120567325 LOC104941710 coding downstream 241028 13322665 ~ 13357702 (-)
LOC120558365 gpr108,LOC107090075 coding upstream 2478 13610299 ~ 13623167 (-)
LOC120558503 NA coding upstream 22773 13630594 ~ 13632316 (-)
LOC120558275 NA coding upstream 42929 13650750 ~ 13658617 (-)
micall2b LOC103369616,LOC102192527,LOC102076226 coding upstream 179388 13787209 ~ 13805843 (-)
si:ch73-12o23.1 LOC104949822,LOC100695517,LOC102295315,LOC101478649 coding upstream 204437 13812258 ~ 13829038 (-)
LOC120558524 NA non-coding downstream 62482 13520001 ~ 13536248 (-)
G4115 LOC101079010,LOC105939483,LOC106946826,LOC103153258,LOC106910155 non-coding downstream 106733 13487920 ~ 13491997 (-)
G4066 NA non-coding downstream 326556 13195046 ~ 13272174 (-)
G4032 NA non-coding downstream 441513 13089192 ~ 13157217 (-)
LOC120567935 NA non-coding downstream 445884 13151720 ~ 13152846 (-)
LOC120558530 NA non-coding upstream 157372 13765193 ~ 13767856 (-)
G4354 NA non-coding upstream 437539 14045360 ~ 14045719 (-)
G4359 NA non-coding upstream 447622 14055443 ~ 14056457 (-)
LOC120558581 NA non-coding upstream 460027 14067848 ~ 14071547 (-)
LOC120558586 NA non-coding upstream 470496 14078317 ~ 14078999 (-)
G4168 NA other downstream 31464 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 558450 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 570337 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 732691 12865968 ~ 12866039 (-)
trnac-gca_2 NA other downstream 736129 12862530 ~ 12862601 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other upstream 411081 14018902 ~ 14042510 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 1104323 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 1293325 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 1818723 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 2737897 16345718 ~ 16347922 (-)

Expression


Co-expression Network