LOC120558725 (LOC103354901,LOC103383579)


Basic Information

Item Value
gene id LOC120558725
gene name LOC103354901,LOC103383579
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 22619670 ~ 22634940 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799912.1
CGCTGAGACTGCATTGCTGCGAAGTTTACAGTAGCCACATTTGGAGTTTGGGAGTAACTCTGTAGCAGCGCCCAGGACAGTTTTGGTACATTTCAGCTCGTCTTCTTGCTAGCATAAaccggtgtgtctgtgtgtgtatatacatgttCTGAAGACGAGAAAACGTCAGTGAGCGGCATGGATACACAGAGCTAAGCTTTCCATCTGCTGTCGATTTGCAGGTAGATGGTAGCTTTTGTAGTGCTGGTAGTTGGTGACTAGCTAACACGAGAACGTGCTTACGTGTGGGGCATGAGggctttattattttagtttgttACGCAGATTCAGTAAGTTCTATATTTTCTTACTGAAAGAGGCTTCTGCATGGTGGAAGTCTTAACCACCCATAGTTTAGCTAGATGTTAGTGTGGAAACTGCACTACGGGTAATAAACTGACGATTTTTGACTCTTGTGGGGAAACGTAACCAAAACAAATACCACATTGATTCCAGAACAGCATGCCTATTAGGCGTTTTGGGCGTCACgggtctctggtctctcttTCTCAAACTCCAAAGCTGTCCTATGGTTACAAGAAAATGAATCTTTCAAGAAGTGGCTACCGTGTTTTTTCTGCTAACTCCACCACCGCCTGCACCGAGCTGGCCAAAAAGATCACAGAACGCTTGGGTGTGGAGTTGGGCAAGTCACTGGTTCATCAAGAGCCAAATACAGAGACTAGAGTGGACGTGAAAGAGTCTGTCCGTGGACAAGACATCTTTATCATTCAGACCATTCCCAGAGATGTCAACACGGCCATCATGGAGCTGCTGGTTATGGCCTATGCCCTGAAGACGTCCTGTGCCAAGAACATCATCGGGGTCATTCCCTACTTTCCTTACAGCAAGCAGTGCAAGATGAGGAAGAGAGGATCCATTGTCTGCAAGCTGCTAGCATCCATGTTAGCTAAAGCTGGGCTAACTCACATCATCACTATGGACCTCCACcagaaagaaatccagggctTCTTCAGCTTCCCTGTTGACAACCTGAGAGCTTCCCCTTTTCTCATCCAGTACATCCAGGATGAGATCCCAGACTACAGGAATGCCGTAATTGTTGCAAAGTCCCCTTCAGCTGCCAAGCGAGCTCAGTCCTACGCTGAGAGGCTGCGACTCGGGCTGGCAGTGATGCACGGGGAGGCCCATCATTCAGAGTTGGACATGGCTGATGGAAGACACTCTCCCCCCTTGTCCCGCACCACCACAGGACACACCGGCCTGGAGCTGCCATCCAATGAAGGCCCCAGACATCTTTCTTCTTTCCCTGGGATGGAGCTCCCAATGATGATGGCGAAGGAGAAGCCACCCATCACAGTTGTTGGAGATGTAGGAGGCAGAATCGCCATTATTGTTGATGATATTATAGATGATGTGGAGGACTTTGTTGCAGCAGCAGAAATCCTGAAGGAGAGAGGAGCCTACAAGATCTACATCATGGCTACACATGGCCTGCTGTCTGCAGATGCACCAAGACTAATAGAGGAGTCTGCTATCGATGAGGTGGTGGTGACCAACACTGTACCTCATGAGGTCCAGAAGCTGCAGTGTCCAAAAATCAAAACTGTGGATGTCAGTATGATCCTGGCTGAGGCCATCCGGCGCACCCACAACGGAGAGTCCATGGCCTATCTGTTCCGTAACATCGCTTTGGATGACTGAGGCAACACACACTTGCATTTACAttcctgcacgcacacacacacacacacacaccgacgaCTATGAATCAAGATTGAACATGTTTCTGCTTTAACctgttgtttctgtttgttttggctgtatttactgtatgtgagaTAAAAAGCAACTCAAACTCTGCTTTATTCTTCTGATATGTTACACAGTGGGACTttacaaacaatacaaacagtTTCACTTCACTAATGTATGCTTCCTACCATCTGAAAACATAAATACCACGACATAATGTAACATGTGCATCCTCTCAGTATGCCACAGAATTTGGCAAATAAAACAGTTCTTGGGGGAGTgaaa
>XM_039799923.1
CGCTGAGACTGCATTGCTGCGAAGTTTACAGTAGCCACATTTGGAGTTTGGGAGTAACTCTGTAGCAGCGCCCAGGACAGTTTTGGTACATTTCAGCTCGTCTTCTTGCTAGCATAAaccggtgtgtctgtgtgtgtatatacatgttCTGAAGACGAGAAAACGTCAGTGAGCGGCATGGATACACAGAGCTAAGCTTTCCATCTGCTGTCGATTTGCAGAACAGCATGCCTATTAGGCGTTTTGGGCGTCACgggtctctggtctctcttTCTCAAACTCCAAAGCTGTCCTATGGTTACAAGAAAATGAATCTTTCAAGAAGTGGCTACCGTGTTTTTTCTGCTAACTCCACCACCGCCTGCACCGAGCTGGCCAAAAAGATCACAGAACGCTTGGGTGTGGAGTTGGGCAAGTCACTGGTTCATCAAGAGCCAAATACAGAGACTAGAGTGGACGTGAAAGAGTCTGTCCGTGGACAAGACATCTTTATCATTCAGACCATTCCCAGAGATGTCAACACGGCCATCATGGAGCTGCTGGTTATGGCCTATGCCCTGAAGACGTCCTGTGCCAAGAACATCATCGGGGTCATTCCCTACTTTCCTTACAGCAAGCAGTGCAAGATGAGGAAGAGAGGATCCATTGTCTGCAAGCTGCTAGCATCCATGTTAGCTAAAGCTGGGCTAACTCACATCATCACTATGGACCTCCACcagaaagaaatccagggctTCTTCAGCTTCCCTGTTGACAACCTGAGAGCTTCCCCTTTTCTCATCCAGTACATCCAGGATGAGATCCCAGACTACAGGAATGCCGTAATTGTTGCAAAGTCCCCTTCAGCTGCCAAGCGAGCTCAGTCCTACGCTGAGAGGCTGCGACTCGGGCTGGCAGTGATGCACGGGGAGGCCCATCATTCAGAGTTGGACATGGCTGATGGAAGACACTCTCCCCCCTTGTCCCGCACCACCACAGGACACACCGGCCTGGAGCTGCCATCCAATGAAGGCCCCAGACATCTTTCTTCTTTCCCTGGGATGGAGCTCCCAATGATGATGGCGAAGGAGAAGCCACCCATCACAGTTGTTGGAGATGTAGGAGGCAGAATCGCCATTATTGTTGATGATATTATAGATGATGTGGAGGACTTTGTTGCAGCAGCAGAAATCCTGAAGGAGAGAGGAGCCTACAAGATCTACATCATGGCTACACATGGCCTGCTGTCTGCAGATGCACCAAGACTAATAGAGGAGTCTGCTATCGATGAGGTGGTGGTGACCAACACTGTACCTCATGAGGTCCAGAAGCTGCAGTGTCCAAAAATCAAAACTGTGGATGTCAGTATGATCCTGGCTGAGGCCATCCGGCGCACCCACAACGGAGAGTCCATGGCCTATCTGTTCCGTAACATCGCTTTGGATGACTGAGGCAACACACACTTGCATTTACAttcctgcacgcacacacacacacacacacaccgacgaCTATGAATCAAGATTGAACATGTTTCTGCTTTAACctgttgtttctgtttgttttggctgtatttactgtatgtgagaTAAAAAGCAACTCAAACTCTGCTTTATTCTTCTGATATGTTACACAGTGGGACTttacaaacaatacaaacagtTTCACTTCACTAATGTATGCTTCCTACCATCTGAAAACATAAATACCACGACATAATGTAACATGTGCATCCTCTCAGTATGCCACAGAATTTGGCAAATAAAACAGTTCTTGGGGGAGTgaaa
>XM_039799931.1
GCGCCCAGGACAGTTTTGAACAGCATGCCTATTAGGCGTTTTGGGCGTCACgggtctctggtctctcttTCTCAAACTCCAAAGCTGTCCTATGGTTACAAGAAAATGAATCTTTCAAGAAGTGGCTACCGTGTTTTTTCTGCTAACTCCACCACCGCCTGCACCGAGCTGGCCAAAAAGATCACAGAACGCTTGGGTGTGGAGTTGGGCAAGTCACTGGTTCATCAAGAGCCAAATACAGAGACTAGAGTGGACGTGAAAGAGTCTGTCCGTGGACAAGACATCTTTATCATTCAGACCATTCCCAGAGATGTCAACACGGCCATCATGGAGCTGCTGGTTATGGCCTATGCCCTGAAGACGTCCTGTGCCAAGAACATCATCGGGGTCATTCCCTACTTTCCTTACAGCAAGCAGTGCAAGATGAGGAAGAGAGGATCCATTGTCTGCAAGCTGCTAGCATCCATGTTAGCTAAAGCTGGGCTAACTCACATCATCACTATGGACCTCCACcagaaagaaatccagggctTCTTCAGCTTCCCTGTTGACAACCTGAGAGCTTCCCCTTTTCTCATCCAGTACATCCAGGATGAGATCCCAGACTACAGGAATGCCGTAATTGTTGCAAAGTCCCCTTCAGCTGCCAAGCGAGCTCAGTCCTACGCTGAGAGGCTGCGACTCGGGCTGGCAGTGATGCACGGGGAGGCCCATCATTCAGAGTTGGACATGGCTGATGGAAGACACTCTCCCCCCTTGTCCCGCACCACCACAGGACACACCGGCCTGGAGCTGCCATCCAATGAAGGCCCCAGACATCTTTCTTCTTTCCCTGGGATGGAGCTCCCAATGATGATGGCGAAGGAGAAGCCACCCATCACAGTTGTTGGAGATGTAGGAGGCAGAATCGCCATTATTGTTGATGATATTATAGATGATGTGGAGGACTTTGTTGCAGCAGCAGAAATCCTGAAGGAGAGAGGAGCCTACAAGATCTACATCATGGCTACACATGGCCTGCTGTCTGCAGATGCACCAAGACTAATAGAGGAGTCTGCTATCGATGAGGTGGTGGTGACCAACACTGTACCTCATGAGGTCCAGAAGCTGCAGTGTCCAAAAATCAAAACTGTGGATGTCAGTATGATCCTGGCTGAGGCCATCCGGCGCACCCACAACGGAGAGTCCATGGCCTATCTGTTCCGTAACATCGCTTTGGATGACTGAGGCAACACACACTTGCATTTACAttcctgcacgcacacacacacacacacacaccgacgaCTATGAATCAAGATTGAACATGTTTCTGCTTTAACctgttgtttctgtttgttttggctgtatttactgtatgtgagaTAAAAAGCAACTCAAACTCTGCTTTATTCTTCTGATATGTTACACAGTGGGACTttacaaacaatacaaacagtTTCACTTCACTAATGTATGCTTCCTACCATCTGAAAACATAAATACCACGACATAATGTAACATGTGCATCCTCTCAGTATGCCACAGAATTTGGCAAATAAAACAGTTCTTGGGGGAGTgaaa
>XM_039799939.1
GCTGAGACTGCATTGCTGCGAAGTTTACAGTAGCCACATTTGGAGTTTGGGAGTAACTCTGTAGCAGCGCCCAGGACAGTTTTGGTACATTTCAGCTCGTCTTCTTGCTAGCATAAaccggtgtgtctgtgtgtgtatatacatgttCTGAAGACGAGAAAACGTCAGTGAGCGGCATGGATACACAGAGCTAAGCTTTCCATCTGCTGTCGATTTGCAGGTAGATGGTAGCTTTTGTAGTGCTGGTAGTTGGTGACTAGCTAACACGAGAACGTGCTTACGTGTGGGGCATGAGggctttattattttagtttgttACGCAGATTCAGTAAGTTCTATATTTTCTTACTGAAAGAGGCTTCTGCATGGTGGAAGTCTTAACCACCCATAGTTTAGCTAGATGTTAGTGTGGAAACTGCACTACGGGTAATAAACTGACGATTTTTGACTCTTGTGGGGAAACGTAACCAAAACAAATACCACATTGATTCCAGAACAGCATGCCTATTAGGCGTTTTGGGCGTCACgggtctctggtctctcttTCTCAAACTCCAAAGCTGTCCTATGGTTACAAGAAAATGAATCTTTCAAGAAGTGGCTACCGTGTTTTTTCTGCTAACTCCACCACCGCCTGCACCGAGCTGGCCAAAAAGATCACAGAACGCTTGGGTGTGGAGTTGGGCAAGTCACTGGTTCATCAAGAGCCAAATACAGAGACTAGAGTGGACGTGAAAGAGTCTGTCCGTGGACAAGACATCTTTATCATTCAGACCATTCCCAGAGATGTCAACACGGCCATCATGGAGCTGCTGGTTATGGCCTATGCCCTGAAGACGTCCTGTGCCAAGAACATCATCGGGGTCATTCCCTACTTTCCTTACAGCAAGCAGTGCAAGATGAGGAAGAGAGGATCCATTGTCTGCAAGCTGCTAGCATCCATGTTAGCTAAAGCTGGGCTAACTCACATCATCACTATGGACCTCCACcagaaagaaatccagggctTCTTCAGCTTCCCTGTTGACAACCTGAGAGCTTCCCCTTTTCTCATCCAGTACATCCAGGATGAGATCCCAGACTACAGGAATGCCGTAATTGTTGCAAAGTCCCCTTCAGCTGCCAAGCGAGCTCAGTCCTACGCTGAGAGGCTGCGACTCGGGCTGGCAGTGATGCACGGGGAGGCCCATCATTCAGAGTTGGACATGGCTGATGGAAGACACTCTCCCCCCTTGTCCCGCACCACCACAGGACACACCGGCCTGGAGCTGCCATTGATGATGGCGAAGGAGAAGCCACCCATCACAGTTGTTGGAGATGTAGGAGGCAGAATCGCCATTATTGTTGATGATATTATAGATGATGTGGAGGACTTTGTTGCAGCAGCAGAAATCCTGAAGGAGAGAGGAGCCTACAAGATCTACATCATGGCTACACATGGCCTGCTGTCTGCAGATGCACCAAGACTAATAGAGGAGTCTGCTATCGATGAGGTGGTGGTGACCAACACTGTACCTCATGAGGTCCAGAAGCTGCAGTGTCCAAAAATCAAAACTGTGGATGTCAGTATGATCCTGGCTGAGGCCATCCGGCGCACCCACAACGGAGAGTCCATGGCCTATCTGTTCCGTAACATCGCTTTGGATGACTGAGGCAACACACACTTGCATTTACAttcctgcacgcacacacacacacacacacaccgacgaCTATGAATCAAGATTGAACATGTTTCTGCTTTAACctgttgtttctgtttgttttggctgtatttactgtatgtgagaTAAAAAGCAACTCAAACTCTGCTTTATTCTTCTGATATGTTACACAGTGGGACTttacaaacaatacaaacagtTTCACTTCACTAATGTATGCTTCCTACCATCTGAAAACATAAATACCACGACATAATGTAACATGTGCATCCTCTCAGTATGCCACAGAATTTGGCAAATAAAACAGTTCTTGGGGGAGTgaaa

Function

NR:

description
PREDICTED: phosphoribosyl pyrophosphate synthase-associated protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799912.1 True 2040 mRNA 0.47 11 22619670 22634940
XM_039799923.1 False 1766 mRNA 0.48 12 22619670 22634940
XM_039799931.1 False 1563 mRNA 0.48 12 22619670 22634873
XM_039799939.1 False 1988 mRNA 0.47 10 22619670 22634939

Neighbor

gene id symbol gene type direction distance location
LOC120562917 LOC103354903 coding downstream 81160 22412600 ~ 22538510 (-)
evi5l evi5l,LOC100697259 coding downstream 299123 22275666 ~ 22320547 (-)
LOC120556520 NA coding downstream 346588 22266418 ~ 22273082 (-)
LOC120556437 mcoln1 coding downstream 380810 22216256 ~ 22238860 (-)
si:ch211-214c7.4 LOC107102761 coding downstream 409940 22182683 ~ 22209730 (-)
si:dkey-45d16.4 LOC104950130 coding upstream 944 22635884 ~ 22641744 (-)
LOC120558762 LOC108242699,LOC106536899,LOC103354898,LOC100703987,LOC103383580 coding upstream 19241 22654181 ~ 22665213 (-)
pik3r5 pik3r5 coding upstream 57847 22692787 ~ 22720815 (-)
stx8 stx8 coding upstream 150555 22785495 ~ 22834464 (-)
mchr1a LOC103354888,LOC104947992,LOC102295449,LOC102791021 coding upstream 358928 22993868 ~ 22997980 (-)
LOC120562974 NA non-coding downstream 15717 22601388 ~ 22603953 (-)
G6762 ddx39a,LOC103150096 non-coding downstream 294287 22324550 ~ 22325383 (-)
G6764 NA non-coding downstream 353678 22264384 ~ 22265992 (-)
G6731 NA non-coding downstream 528113 22090500 ~ 22091557 (-)
LOC120568056 NA non-coding downstream 578739 22035285 ~ 22040931 (-)
G6834 NA non-coding upstream 16592 22651532 ~ 22653786 (-)
G6879 NA non-coding upstream 289891 22924831 ~ 22933891 (-)
G6880 usp43 non-coding upstream 337942 22972882 ~ 22973326 (-)
G6907 LOC107382332,LOC106515271,LOC102218172,LOC108242722,LOC103383557 non-coding upstream 418379 23053319 ~ 23058150 (-)
LOC120556418 NA non-coding upstream 495514 23130454 ~ 23135775 (-)
LOC120556502 LOC104944681,LOC103364456 other downstream 284087 22328519 ~ 22335583 (-)
G6592 ube2o,LOC106534564 other downstream 909858 21708540 ~ 21709812 (-)
LOC120566957 NA other downstream 1050611 21563091 ~ 21569059 (-)
LOC120574674 NA other downstream 2426332 20187281 ~ 20193338 (-)
spink4 NA other downstream 2574944 20042763 ~ 20044726 (-)
LOC120565362 pik3r6 other upstream 30435 22665375 ~ 22692333 (-)
G6881 usp43,LOC104947996 other upstream 346985 22981925 ~ 22988500 (-)
G6924 NA other upstream 453560 23088500 ~ 23164937 (-)
G6943 NA other upstream 578916 23213856 ~ 23242290 (-)
G7065 NA other upstream 937765 23572705 ~ 23573049 (-)

Expression


Co-expression Network