LOC120559379


Basic Information

Item Value
gene id LOC120559379
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8943845 ~ 8954842 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801061.1
GTCTTTACCAGCCTGATATCTGTCTTCTGCTCACTGACAACAGAGGAGAGGCATCTTTAAAGACGACGTCCGTCTTCACTagagatgagaggagCAGCTATGAGTTTAACTGCAGCAGTGAGGGGATTTGTTGTCTTCcttctctctgtgtcagTGATGCAGGGCCAGAGTGACTGGGGAGTGACTTACCCTTCCACTCCGATCTGTGCCTTAGAGAGATCAACCGTGGACATAACATGCACCTACAGATACCCATCCACAGCAAGTCATCAAACTATAGAAGTTCAAGAACGATTATGGTTTACTAAAGGGAGTAATAGGGAACCTGTGGATCTGAAAAAGGACTCAGACTACACAAATCGGGTGGAGTATCACTGTGATGAGAAGAGCTGCACTCTGAGAATCacagacctgagagagagagactcggCTGAGTACAAGTTCAGGTTCATAACAAACCATACACTTGGAGGTTTTACTGGTTCACCTGGAGTCACTTTGTCTGTTACTGTTCCAGACCTCCAGGTGCAGGTGACAAGATCATGGACCCAGGGAGAGCTGAGGTGTCACAGCAGCTGTAATGTACCTGATAATCCTTCATATGTCTGGTACAATAATGGACAGAAAATGGATGGAGAAACATCTTCTTCTCTCAGCGTCTCTGTTGAAGATAATGGCAGCTATTCCTGTGCTGTTACAGGATATGAAGCTTACCGCTCTCCTCCAGTGTATGCTCCAAAGGTTGGTCCCCTGTCTCTGACTCCCACTGGGGAAATCAGAGAGAACAGTAGAGTGAATCTGACCTGCagcagtgatgctaacccagcagctaACTACACCTGGTACAAGAATGGTAAACCTCTAAATGGAAAGGCACAGCTCGTCTTCAGCTCCATCCAGTCCTCTGACTCTGGACAGTATTACTGTACAGCTGAGAACCAGCTGGGGAAAAGGACATCTGAATCCGTCTTTATTGATGTGGAATATGCTCCGAGGTTTCCCTCTGTGTATGCTGAGATAGTGGAGGGCAGTTCAGTGACtctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAAAATGAAGACTCACCGAAAGCATCAGGGCAGATCTTCAACATCACTGATGTCAGACCTGAACACAGTGGGAATTATTACTGTGAAGCCCAGAACAGCAGAGGACGTCAGAACTCCACCTTAAATCTGATTGTTGTAGCAGGGAATTCAACAACAATAATGCATATCATCTGGCCGACTGTGGTGGTCCTGATGCTGATTCCTCTGCTGCTCCTGAGTCTGTGGGCGagTTGGACTCAATTCAGGAAGAAGAAAACTCTGAGCTCCACCACTAAACCACATGAGCCTGTAGAGCtagagTTAGACTCTTGTCCTGATTATGAGAACATCTCAGACACTGCAGCAAAGACAGAATACCCAGATGAGCAGGAAGACCTGTCAGACTCTTGTCCTGTGTATGGGAACATCTGAGAAGATGAGATATGAGAAATATCCCTGTGGAGAGCGAGGCTGTGGAGATTTTATTGTCAATTttcagtagcagcagcaggtaGGAGTCAGCCGCAGCATGTACCAGAATGTTTAGAAGAATGTGGTGTTGGCAGCTTGATCTGAATCATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801061.1 True 1654 mRNA 0.47 10 8943845 8954842

Neighbor

gene id symbol gene type direction distance location
dla LOC103359048,LOC108245305 coding downstream 24701 8912382 ~ 8919144 (-)
myom2a myom2,LOC103359051,LOC101482792,LOC102300862 coding downstream 86067 8818287 ~ 8857778 (-)
LOC120569430 NA coding downstream 126660 8801253 ~ 8817185 (-)
ptp4a1 ptp4a1,LOC107563655,LOC107597142 coding downstream 157179 8776022 ~ 8786666 (-)
si:dkey-23f9.4 NA coding downstream 204557 8732068 ~ 8739288 (-)
LOC120565400 NA coding upstream 52097 9006939 ~ 9011578 (-)
lcor LOC103370035,LOC102205115,LOC102298371,LOC101480656,LOC102797307,LOC105931196 coding upstream 211146 9165988 ~ 9246905 (-)
hoga1 hoga1,LOC102797601 coding upstream 350105 9304947 ~ 9331554 (-)
LOC120559457 LOC103383201,LOC105931257 coding upstream 441988 9396830 ~ 9412357 (-)
LOC120559444 LOC103373853,LOC100706153,LOC102224648,LOC104962798,LOC108246276 coding upstream 522838 9477680 ~ 9489740 (-)
LOC120558812 NA non-coding downstream 51482 8890846 ~ 8892363 (-)
G2961 NA non-coding downstream 143116 8800400 ~ 8800729 (-)
G2960 NA non-coding downstream 143712 8799491 ~ 8800133 (-)
G2937 NA non-coding downstream 185745 8756366 ~ 8758100 (-)
G2894 NA non-coding downstream 298654 8644195 ~ 8645191 (-)
LOC120559564 NA non-coding upstream 16832 8971674 ~ 8986610 (-)
LOC120559581 NA non-coding upstream 19762 8974604 ~ 8980978 (-)
G3036 NA non-coding upstream 72165 9027007 ~ 9027944 (-)
G3052 NA non-coding upstream 166871 9121713 ~ 9124011 (-)
G3053 NA non-coding upstream 171341 9126183 ~ 9126700 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 35759 8905672 ~ 8908086 (-)
G2938 LOC107098689,LOC103359055 other downstream 175872 8758649 ~ 8767973 (-)
wipf2a NA other downstream 442683 8435799 ~ 8501162 (-)
G2840 NA other downstream 734310 8207252 ~ 8209535 (-)
capn9 capn9 other downstream 986224 7935940 ~ 7957621 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other upstream 553762 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other upstream 570419 9525261 ~ 9567845 (-)
G3373 LOC103359075 other upstream 885748 9840590 ~ 10042004 (-)
LOC120559237 LOC103359075 other upstream 903238 9858080 ~ 10211304 (-)
G3586 LOC104950333 other upstream 1944716 10899558 ~ 10905235 (-)

Expression


Co-expression Network