LOC120560193


Basic Information

Item Value
gene id LOC120560193
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17773284 ~ 17779277 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802441.1
tatgtgtacTATAATGCAGACTGATGTGTGCGGAatctcttttattttgaaagcgaCATGCCTGTTATAGGAGTAAATGCTCAAAAAAGAACCAAGCGTCTCAAGCACCGTGAAAATTGTATCGGCCAACCAAGAAAATATATTGAATTATTTAATCACAGGGCATATTTCATATTATGAGTAATGTTAAATGTGGTGAACATTCATTAACTGTCCAATTGCACTCATGTACCATGTACCTTTATTAGTATATTGAGGTATGAGGTTGGATAAAGTGCCCCTTTGTGATTGAAATGATTGCACGTCTAATTTACTTTTGTGAATAACTATAAACTAAAGGGAACCGTTTGTACTTCATACAAATATTAAATCATACCCACCTAATTGGAGTGCAAGtgaatttgttttctttgtacCCTCTTTTATAGATTCATAGCAGTTCATTGCAAGTTTGTACAAGACAGGAAATTCATTTGTGATAGTTCAAGGTTGATAAACATGTGATCTTAATGCAGAAGTGAAAGGGTTTGCATGGTATGCTGACACATAATGTGGGTGTAACATTTTCTATATTGGCAACATTGGTTTTGCAGTTTCTATTTCTTTGAAACTGTAATGCAATAAAATGAGGCGGTGGAGACTTCAAAACCTGCTGTTCACCCTGTGCAttgctCTCAGCTGTGTGAGGAGTGCAGCAGAGTTAATCCGTGTGTCTGGGTATGAAGGGAGAGAAGTTCAAGTTTCTTGTCCCTATGGAGAGGGTTATGAGTCTTATGAGAAGTACCTGTGCAAGAATGACTGTGGGAGTGATGATGTTCTTATTAAGACGACAGAAGCAAAAAAGAACAGATACTCCATCCATGATGACGAACAGAATCGGGTCTTTACTGTGACCATCTCTGATTTGAGGCGTACGGATGCTGGGAAATACTGGTGTGGGGTGACCAGAACTGGAAAGGATCTCTACACTGAAGTCATGCTGGAAGTAGGAAGAGACAGCTGCTGTGATCATTCCACCAAAGTCCAACGTTATGAGGAGAGTTCAGTGTCCTTCAGTTGTCCGTATGAGTCTGAGTACCAGAACAGCCTCAAGTACATCTGCAGAGGAAACCAGCCCTCCACATGTCTGCAGCACGCACTAATCTCCTCTGACACCAAAcaaaagggacagttcacacTTACAGATGACATGGAATCCAGGAAATTCACAGTGACCATTACCAGTTTGACCCAAAACAATTCTGGGTCGTACCTTTGTGGTGTCCATGGAAACACTGGCCTGGATGTTTTCTCTGCTTTTGAGCTAGAAGTCAAAGAGTGGTGCTGTGTGATGTCACACAAACTGAGCGGCTTTGTGGGACGCCCAGTAACTATGCAGTGTCCCTATCCACCACATCACAAGGATAACAGGAAGTTCCTCTGTAAGGGAGATCACCGCAAAAACTGTAAAGACATGATGACGAGTCAAAGCAGGTTCATGCTGCAAGAAGATGTTGCATCCAGCTCTTTCTCAGTGACGATCACAGAGCTGAAAGCAGGGGATGCTGGGACATACTGGTGTGGTTCAGACTCACAGTGGAGTGCTGGTAATTACACCAAGATTCAGCTGTCACTAGACTTTCAGCAGACCAGCACTGTGATGTCTACTATCAATGTGGTTCCTACCTTCACTGTGGTGGAACCTGTCAGATCACAAGCAACACCTATCCCTGGAAAAGAGatcaaagatgCAACACTCTTTTACTCTGTGGTTTTCATTGTGCCCGCTCTGCTGCTCATACTGACATTTGCCCTGGTCATAATTTATAAATACAAATGTTACAAAGTGCGAGGAGCTGGAGGCAACATGAACAGAAACAAAACCaagacagcagaaacagaggAAGTGATAAGTGTATCGGATATTTATCAAAATCAAGACGTAGTGTACTCAAAGCAGCGGACCTCCGAACCACAGAGCGCCTGTCAACACCACGATGACGCAGGTGAAGCCGAACAAGATTCTGTGTACCAAAACGACACCACAACAGATGATATCTACTGTAATCAAATTTCCATTATAGCCAATAGGAGATGAACAGCATGCACATGTGTGATCAAACCTTGCATTTTCGGGTCACATCTGTACCCAAATGATCCTGTTTGTATCTCAATTAACAGTTGACCAGCAAATATTCACGTACCGCTATGGTCCAACCTTTCCATTGTCTTACTGAAAACTACAGTAACATAATTATTTGTACAGATTTGTTTTATAATTACCATCAGTTATATTAAGTACTTATTGTCATTGCTTATTTAATTTCTTCAACTTAGATTTTACATTTtagcttttacttttatattcaTTATGATTGCTTATTGTTAATATAACTGTTGCACAACTGCAATATAAGAATTGTAGGCATGATAACCAGTTCACCTACAAGGTAAATACCCCAAATGTAAGTTACCTTCATGAATGCACCTTTACttaaagtgaataaataaacaaaatgaaacaactGAC
>XM_039802451.1
tatgtgtacTATAATGCAGACTGATGTGTGCGGAatctcttttattttgaaagcgaCATGCCTGTTATAGGAGTAAATGCTCAAAAAAGAACCAAGCGTCTCAAGCACCGTGAAAATTGTATCGGCCAACCAAGAAAATATATTGAATTATTTAATCACAGGGCATATTTCATATTATGAGTAATGTTAAATGTGGTGAACATTCATTAACTGTCCAATTGCACTCATGTACCATGTACCTTTATTAGTATATTGAGGTATGAGGTTGGATAAAGTGCCCCTTTGTGATTGAAATGATTGCACGTCTAATTTACTTTTGTGAATAACTATAAACTAAAGGGAACCGTTTGTACTTCATACAAATATTAAATCATACCCACCTAATTGGAGTGCAAGtgaatttgttttctttgtacCCTCTTTTATAGATTCATAGCAGTTCATTGCAAGTTTGTACAAGACAGGAAATTCATTTGTGATAGTTCAAGGTTGATAAACATGTGATCTTAATGCAGAAGTGAAAGGGTTTGCATGGTATGCTGACACATAATGTGGGTGTAACATTTTCTATATTGGCAACATTGGTTTTGCAGTTTCTATTTCTTTGAAACTGTAATGCAATAAAATGAGGCGGTGGAGACTTCAAAACCTGCTGTTCACCCTGTGCAttgctCTCAGCTGTGTGAGGAGTGCAGCAGAGTTAATCCGTGTGTCTGGGTATGAAGGGAGAGAAGTTCAAGTTTCTTGTCCCTATGGAGAGGGTTATGAGTCTTATGAGAAGTACCTGTGCAAGAATGACTGTGGGAGTGATGATGTTCTTATTAAGACGACAGAAGCAAAAAAGAACAGATACTCCATCCATGATGACGAACAGAATCGGGTCTTTACTGTGACCATCTCTGATTTGAGGCGTACGGATGCTGGGAAATACTGGTGTGGGGTGACCAGAACTGGAAAGGATCTCTACACTGAAGTCATGCTGGAAGTAGGAAGAGACAGCTGCTGTGATCATTCCACCAAAGTCCAACGTTATGAGGAGAGTTCAGTGTCCTTCAGTTGTCCGTATGAGTCTGAGTACCAGAACAGCCTCAAGTACATCTGCAGAGGAAACCAGCCCTCCACATGTCTGCAGCACGCACTAATCTCCTCTGACACCAAAcaaaagggacagttcacacTTACAGATGACATGGAATCCAGGAAATTCACAGTGACCATTACCAGTTTGACCCAAAACAATTCTGGGTCGTACCTTTGTGGTGTCCATGGAAACACTGGCCTGGATGTTTTCTCTGCTTTTGAGCTAGAAGTCAAAGACTTTCAGCAGACCAGCACTGTGATGTCTACTATCAATGTGGTTCCTACCTTCACTGTGGTGGAACCTGTCAGATCACAAGCAACACCTATCCCTGGAAAAGAGatcaaagatgCAACACTCTTTTACTCTGTGGTTTTCATTGTGCCCGCTCTGCTGCTCATACTGACATTTGCCCTGGTCATAATTTATAAATACAAATGTTACAAAGTGCGAGGAGCTGGAGGCAACATGAACAGAAACAAAACCaagacagcagaaacagaggAAGTGATAAGTGTATCGGATATTTATCAAAATCAAGACGTAGTGTACTCAAAGCAGCGGACCTCCGAACCACAGAGCGCCTGTCAACACCACGATGACGCAGGTGAAGCCGAACAAGATTCTGTGTACCAAAACGACACCACAACAGATGATATCTACTGTAATCAAATTTCCATTATAGCCAATAGGAGATGAACAGCATGCACATGTGTGATCAAACCTTGCATTTTCGGGTCACATCTGTACCCAAATGATCCTGTTTGTATCTCAATTAACAGTTGACCAGCAAATATTCACGTACCGCTATGGTCCAACCTTTCCATTGTCTTACTGAAAACTACAGTAACATAATTATTTGTACAGATTTGTTTTATAATTACCATCAGTTATATTAAGTACTTATTGTCATTGCTTATTTAATTTCTTCAACTTAGATTTTACATTTtagcttttacttttatattcaTTATGATTGCTTATTGTTAATATAACTGTTGCACAACTGCAATATAAGAATTGTAGGCATGATAACCAGTTCACCTACAAGGTAAATACCCCAAATGTAAGTTACCTTCATGAATGCACCTTTACttaaagtgaataaataaacaaaatgaaacaactGAC

Function

GO: NA

KEGG:

id description
K13073 PIGR; polymeric immunoglobulin receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802441.1 True 2509 mRNA 0.40 8 17773284 17779277
XM_039802451.1 False 2209 mRNA 0.39 7 17773284 17779277

Neighbor

gene id symbol gene type direction distance location
LOC120560200 NA coding downstream 5109 17766923 ~ 17768175 (-)
LOC120556506 NA coding downstream 9475 17757669 ~ 17763809 (-)
LOC120560159 NA coding downstream 18802 17693557 ~ 17754482 (-)
LOC120562183 tekt4 coding downstream 91500 17677670 ~ 17681784 (-)
LOC120569316 LOC104945333,LOC102299380,LOC102207980,LOC101475478 coding downstream 97082 17657147 ~ 17676202 (-)
LOC120563097 LOC104965080,LOC103373413,LOC102785880,LOC100703819,LOC102203376 coding upstream 3312 17782589 ~ 17788980 (-)
b3gntl1 b3gntl1,LOC105924764 coding upstream 15075 17794352 ~ 17812575 (-)
tecrb tecr,LOC107390378 coding upstream 760386 18539663 ~ 18552834 (-)
tmed1b LOC104964575,LOC104925388,LOC103362227,LOC101073760 coding upstream 844831 18624108 ~ 18629125 (-)
LOC120571862 NA coding upstream 866882 18646159 ~ 18648400 (-)
LOC120560178 NA non-coding downstream 33437 17738072 ~ 17739847 (-)
G5608 NA non-coding downstream 38533 17703216 ~ 17734751 (-)
LOC120560186 NA non-coding downstream 72895 17699260 ~ 17700389 (-)
G5522 NA non-coding downstream 127619 17617187 ~ 17645665 (-)
G5506 NA non-coding downstream 160076 17557841 ~ 17613208 (-)
G5616 NA non-coding upstream 2503 17781780 ~ 17782013 (-)
G5638 NA non-coding upstream 73387 17852664 ~ 17852981 (-)
G5666 NA non-coding upstream 188050 17967327 ~ 17968130 (-)
G5679 NA non-coding upstream 222148 18001425 ~ 18003156 (-)
LOC120563150 NA non-coding upstream 225958 18005235 ~ 18008724 (-)
LOC120560175 NA other downstream 59386 17710639 ~ 17713898 (-)
LOC120569099 NA other downstream 352186 17412053 ~ 17421098 (-)
LOC120558720 NA other downstream 1425362 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 2087645 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2869055 14901146 ~ 14904229 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 38230 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 56627 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 100591 17879868 ~ 17881759 (-)
G5930 LOC102307335,LOC101466373 other upstream 1105691 18884968 ~ 18890220 (-)
mcrip2 mcrip2,LOC104963804 other upstream 1192693 18971970 ~ 18982318 (-)

Expression


Co-expression Network