LOC120560200


Basic Information

Item Value
gene id LOC120560200
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17766923 ~ 17768175 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802464.1
CCCTATGGAGAGGGTTATGAGTCTTATGAGAAGTACCTGTGCAAGAATGACTGTgagaatgatgatgatgttctTATTACGACGACAGAAGCAAAGAAGAACAGATACTCCATCCATGATGACAGACAGGTATTTACTGTGACCATCTCTGATTTGAGGCGTATGGATGCTGGGAAATACCTGTGTGGGATTACCAGAACTGGTTATGATACCTACCCTGCGGAAGTAAACCTGGAAGTAAAACAAGACAGCTGCTGTGATCATTCCACCAAAGTCCAACGTTATGAGGAGAGTTCAGTGTCCTTCAGTTGTCCGTATGAGTCTGAGTACCAGAACAGCCTCAAGTACATCTGCAGAGGAAACCAGCCCTCCACATGTCTGCAGCACGCACTAATCTCCTCTGACAACAAAcaaaagggacagttcacacTTACAGATGACATGGCATCCAGGAAATTCACAGTGACCATTACCAGTTTGACCCAAAACAATTCTTGGTCGTACCTTTGTGGTGTCCATGGAAACACTGGCCTGGATGTTTTCTCTGCTTTTGAGCTAGAAGTCAAAGGTAAAAGATCTACCTCATCATATTGTAGTAAACTGTTATTTTCCACAGAATGTAAATCAGCCCAAAAACACGTTTCTGTAAAATTGATATtaagaaaaaatgacaaaaggttTCAGAAGCAAACCTTTTATTTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802464.1 True 705 mRNA 0.42 2 17766923 17768175

Neighbor

gene id symbol gene type direction distance location
LOC120556506 NA coding downstream 3114 17757669 ~ 17763809 (-)
LOC120560159 NA coding downstream 12441 17693557 ~ 17754482 (-)
LOC120562183 tekt4 coding downstream 85139 17677670 ~ 17681784 (-)
LOC120569316 LOC104945333,LOC102299380,LOC102207980,LOC101475478 coding downstream 90721 17657147 ~ 17676202 (-)
crtac1a LOC104945331,LOC103368018 coding downstream 119101 17641306 ~ 17647822 (-)
LOC120560193 NA coding upstream 5109 17773284 ~ 17779277 (-)
LOC120563097 LOC104965080,LOC103373413,LOC102785880,LOC100703819,LOC102203376 coding upstream 14414 17782589 ~ 17788980 (-)
b3gntl1 b3gntl1,LOC105924764 coding upstream 26177 17794352 ~ 17812575 (-)
tecrb tecr,LOC107390378 coding upstream 771488 18539663 ~ 18552834 (-)
tmed1b LOC104964575,LOC104925388,LOC103362227,LOC101073760 coding upstream 855933 18624108 ~ 18629125 (-)
LOC120560178 NA non-coding downstream 27076 17738072 ~ 17739847 (-)
G5608 NA non-coding downstream 32172 17703216 ~ 17734751 (-)
LOC120560186 NA non-coding downstream 66534 17699260 ~ 17700389 (-)
G5522 NA non-coding downstream 121258 17617187 ~ 17645665 (-)
G5506 NA non-coding downstream 153715 17557841 ~ 17613208 (-)
G5616 NA non-coding upstream 13605 17781780 ~ 17782013 (-)
G5638 NA non-coding upstream 84489 17852664 ~ 17852981 (-)
G5666 NA non-coding upstream 199152 17967327 ~ 17968130 (-)
G5679 NA non-coding upstream 233250 18001425 ~ 18003156 (-)
LOC120563150 NA non-coding upstream 237060 18005235 ~ 18008724 (-)
LOC120560175 NA other downstream 53025 17710639 ~ 17713898 (-)
LOC120569099 NA other downstream 345825 17412053 ~ 17421098 (-)
LOC120558720 NA other downstream 1419001 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 2081284 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2862694 14901146 ~ 14904229 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 49332 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 67729 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 111693 17879868 ~ 17881759 (-)
G5930 LOC102307335,LOC101466373 other upstream 1116793 18884968 ~ 18890220 (-)
mcrip2 mcrip2,LOC104963804 other upstream 1203795 18971970 ~ 18982318 (-)

Expression


Co-expression Network