LOC120560623 (LOC104959125,LOC102294989,LOC102198497,LOC101481490)


Basic Information

Item Value
gene id LOC120560623
gene name LOC104959125,LOC102294989,LOC102198497,LOC101481490
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 1206918 ~ 1215606 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803304.1
ATGGCCATTTATGCGAAAGCTGCCATTTACCCGCCATCAAAGCCAGAAAGGGAGAGGATTGAGGCTCAAAGTGCACCATTTGATGCCAAGAAGGCAAGAAAGGCGCTATGGAGGCTCCACCCcatcttctctgtctctgacaACGCTTTTCAGTTCATGCAAACTGATAGGGAGAACCAGTCTATCTTGATCACTGGAGAATCTGGTGCTGGAAAGACTGTTAACACCAAGCGTGTCATCCAGTACTTTGCAACAATTGCAGTTGGTGGACCAAAGAAGGACGACTCAAAGGGGTCACTGGAGGATCAGATTATTGCAGCCAATCCCCTCCTGGAGGCCTATGGTAACGCCAAAACTATTAGGAATGACAACTCTTCTCGTTTTGGTAAATTCATCAGAATCCATTTCGGCGCAACTCGCAAACTGGCAAGTGCTGATATTGAGACATATCTGCTGGAGAAATCAAGAGTGACATACCAGCTTTCTGATGAAAGAGGTTATCACATCTTCTTCCAGATGATGACCGGCCACATACCTGAGCTGATTGATTTGGCACTCATCTCAACCAACCCCTATGACTTCCCCATGTGTAGCATGGGTCAGATCACTGTGGCCAGCATTGATGACAAAGTTGAGCTGGAAGCCACAGATAACGCTATTGATATCCTGGGCTTCACTCATGAGGAGAAAATGGCCATCTACAAGTTGACTGGTGCTGTGCTCCACCATGGTAACATGAAGTTCAAGCAGAAGCAGCGTGAGGAGCAGGCTGAGCCTGATGGCACAGAGGAGGCTGACAAGGTCGCTTACTTGCTGGGTCTGAACTCCGCTGACATGCTCAAGGCTATATGCTTTCCCAGAGTGAAGGTCGGAAATGAGTATGTCACCAAGGGACAGACTGTACCTCAGGTGATGAACTCAGTGACAGCCCTGGCCAAGGCTATCTATGAGAGGATGTTCTTGTGGATGGTCATTCGTATTAACGAGATGTTGGACACTAAACAAGAAAGACAGTTCTACATTGGTGTCCTGGACATTGCTGGTTTTGAAATCTTTGACTTCAACACCTTGGAACAGCTGTGCATCAACTTCACCAATGAGAAACTGCAACAGTTTTTCAACCACACCATGTTTGTCCTGGAGCAAGAGGAGTACAAGAAGGAGGGTATTATCTGGGAGTTCATTGACTTTGGCATGGACTTGGCTGCCTGCATTGAGCTAATTGAAAAGCCCATGGGCATCTTCTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGGCCACAGACACATCCTTCAAGAACAAGCTGTATGACCAGCATCTTGGAAAAACCAAAGCATTTGAGAAGCCTAAGGCCCCCAAGAAAGGCAAGATTGAGGCCCACTTCTCCCTGGTGCACTACGCTGGTACCGTGGACTACAATATCGCTGGCTGGCTGGACAAGAACAAGGATCCGCTGAATGACTCCGTCTGTCAGCTGTACCAGAAATCCCCAGTGAAACTGCTGGCTCTCTGCTTCCCTATTATCGTTGAGGATGCTACCAAGAAGGGAGGCAAGAAGAAGGGTGGTTCTATGCAGACTGTGTCTTCACAGTTTAGGGAGAACTTGGGGAAGCTGATGAGTAACTTGAGGAGCACCCATCCTCACTTTGTGCGCTGCCTGATTCCCAATGAGTCAAAGACTCCAGgTCTGATGGAGAACTTCCTGGTCATCCACCAGCTCAGGTGTAACGGTGTGCTGGAGGGTATCAGAATCTGCAGAAAAGGTTTCCCCAGCCGAATCCTTTATGCTGACTTCAAGCAGAGGTATTAATGGATAT

Function

NR:

description
PREDICTED: myosin heavy chain, fast skeletal muscle-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803304.1 True 1819 mRNA 0.48 16 1206918 1215606

Neighbor

gene id symbol gene type direction distance location
LOC120566383 NA coding upstream 35653 1138078 ~ 1171265 (+)
LOC120566742 NA coding upstream 56420 1149006 ~ 1150498 (+)
LOC120566319 NA coding upstream 81181 622380 ~ 1125737 (+)
LOC120566475 NA coding upstream 103389 1093019 ~ 1103529 (+)
LOC120566725 NA coding upstream 134277 1066698 ~ 1072641 (+)
LOC120566607 NA coding downstream 11752 1227358 ~ 1235973 (+)
LOC120566570 NA coding downstream 37162 1252768 ~ 1258104 (+)
LOC120566489 NA coding downstream 44413 1260019 ~ 1267265 (+)
LOC120566495 NA coding downstream 126018 1341624 ~ 1347194 (+)
LOC120566750 NA coding downstream 148351 1363957 ~ 1369052 (+)
G195 NA non-coding upstream 11668 885107 ~ 1195250 (+)
G281 NA non-coding upstream 238398 967330 ~ 968520 (+)
LOC120566926 NA non-coding upstream 314795 891621 ~ 892123 (+)
G270 LOC103372508 non-coding upstream 394971 808561 ~ 811947 (+)
G261 NA non-coding upstream 514689 686445 ~ 692229 (+)
LOC120566887 NA non-coding downstream 87107 1302713 ~ 1303535 (+)
G309 NA non-coding downstream 135914 1351520 ~ 1352050 (+)
G310 NA non-coding downstream 138530 1354136 ~ 1354378 (+)
G321 LOC106675347,LOC106676307,LOC106676577,LOC107663003,LOC107395936,LOC107379945 non-coding downstream 167524 1383130 ~ 1383452 (+)
G322 NA non-coding downstream 168851 1384457 ~ 1384658 (+)
G165 NA other upstream 48359 1144654 ~ 1158559 (+)
G292 NA other upstream 62505 1116624 ~ 1144413 (+)
G199 NA other upstream 187880 1016907 ~ 1019038 (+)
LOC120566368 NA other upstream 194049 907840 ~ 1012869 (+)
LOC120566414 LOC104946033 other upstream 195303 926306 ~ 1011615 (+)
G149 LOC104959125,LOC105030654 other downstream 96261 1311867 ~ 1312431 (+)
G355 NA other downstream 320609 1536215 ~ 1536697 (+)
G369 NA other downstream 366432 1582038 ~ 1919824 (+)
G363 LOC104946033,LOC104961227 other downstream 378216 1593822 ~ 1879546 (+)
LOC120566853 snrpb2,LOC102212107,LOC102301910,LOC101474810 other downstream 530965 1746571 ~ 1836460 (+)

Expression


Co-expression Network