wdr83 (wdr83,LOC102798015)


Basic Information

Item Value
gene id wdr83
gene name wdr83,LOC102798015
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10647077 ~ 10655066 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803581.1
ACGTGAGGGGTGGGTAAAATGAATGGTGGAAGCGTTTGATGGTTACAAAGCAAACCGGGAAAAACGTATTAACAacgcattattattataatattagctGCACCAGGAATATCAACATGGCTCTCCCATGAAAATTGAACTCTGGTGAAACGGTTCAAGTAAGTTAAATAAgtTATGTCATCATGGCGTTCCCTGAACCCAGACCTCAGGCTCCTCAGCTCCCTCAACATCTgctcaggaccatagactgtcaGCAAGGAGCTGTCAGGGCTGTTCGCTTCAAcgCTGATGGGAACTACCTGCTGTCCTGTGGCAGTGACAAATCTCTAAAGCTGTGGAGCGTGAGCCGAGGGACCCCGCTGAAGACATACAGCGGCCATGGATACGAGGTTCTGGATGCCGATGGTTCCTATGACAACAGTCACCTGTGCTCCTGCAGCTCCGATAAGACCGTGATCCTGTGGGACGTCGCCACAGGCCAGGTCACACGCAAACTGAGAGGCCACGCCGGGAAAGTCAACTGTGTCCAGTTCAACGAGGAGGCAACTGTCATCTTGTCTGGGTCTCTCGATGGGACGGTTCGGTGCTGGGACACCAGGTCCAGAAGATTTGAGCCCATCCAGGTTCTAGACGAGGCTCGGGACAGCGTCAGCAGCCTGAAGGTGGCACAACACGAGCTGCTTACCGGGTCGGTGGATGGCAGAGTGAGGCGCTACGACCTGAGAATGGGACAGCTGCACGTTGACTTCATCAGCAGTCCCAtcacatgtgtgtgtttcagtcagGACGGTCAGTGCACTCTGAGCTCCAGTCTGGACTCAACAGTCCGACTACTGGACAAGAGCACCGGGGAAATGCTGGGAGAGTATTCTGGACACAAGATGAAGGGCTATAAGCTGGACTGCTGCCTGTCGAGTAAAGACACCCACGTTCTGAGCTGCTCAGAAGACGGACACGTCTATTTCTGGGACCTGGTGGAAGGATCTTTGTCTTTGAAACTGCCAGTGGGGAAAGCTGTCGTCCAGTCGTTGTCCTTCCACCCCACAGAGACCTGCCTCATCACAGCCATGGAGGGGCGCGTCCAGGTGTGGGGGGCAGAGCCCGAGGAGACGGAGGAGGATGCAGCGGCCACATAGAGAATGGTGAAAGTAGTCCAAAGCCACATTTGCATGctgagaagatttttttttttttttcttctctttttccaaTAACAGTCTGTAAACCTCATCATTTTAAAACCTGATACAACTTATGGTGGCATGATAGCATCTTACTTCCACATTTAGTTTCTTGTGTCTGTAAACACAGGGTTAGGttggaaaaaggaaaaatcgCAAAACATGAAACTGAATCACAAAGCATCAAAGGCTCATGTGGACGGCTTAACTTGAATAAGATCCAAACTgggggtaaaaaaaataaatccacttTGGTCAGAAGTGAGCTACATAGATACACCGTTGATGTCAGGTGCAGCTAACTTCTTAGCCAGATTATCTGTCTTTATGGCTGTTAGCTTTCCAAAGATTTAGCTCTCTGGAGAAGGGAAGCAAATGCTAAACACATACCAGCTGACACAAATAGTGCAAAGTCCACAGATGTAGAGTTCATGATCTGGATGTAAATCTAATTTTAGTTTATGAATGAATCATAACAGTTAACTAAATGATCTAGGActtggatttttgtgtgtgtgaaaacataTATTTTTGTACAAAACCTTGAATAAACGTTTTCTTGTATAAATGACA
>XM_039803590.1
ACGTGAGGGGTGGGTAAAATGAATGGTGGAAGCGTTTGATGGTTACAAAGCAAACCGGGAAAAACGTATTAACAacgcattattattataatattagctGCACCAGGAATATCAACATGGCTCTCCCATGAAAATTGAACTCTGGTGAAACGGTTCAAgtTATGTCATCATGGCGTTCCCTGAACCCAGACCTCAGGCTCCTCAGCTCCCTCAACATCTgctcaggaccatagactgtcaGCAAGGAGCTGTCAGGGCTGTTCGCTTCAAcgCTGATGGGAACTACCTGCTGTCCTGTGGCAGTGACAAATCTCTAAAGCTGTGGAGCGTGAGCCGAGGGACCCCGCTGAAGACATACAGCGGCCATGGATACGAGGTTCTGGATGCCGATGGTTCCTATGACAACAGTCACCTGTGCTCCTGCAGCTCCGATAAGACCGTGATCCTGTGGGACGTCGCCACAGGCCAGGTCACACGCAAACTGAGAGGCCACGCCGGGAAAGTCAACTGTGTCCAGTTCAACGAGGAGGCAACTGTCATCTTGTCTGGGTCTCTCGATGGGACGGTTCGGTGCTGGGACACCAGGTCCAGAAGATTTGAGCCCATCCAGGTTCTAGACGAGGCTCGGGACAGCGTCAGCAGCCTGAAGGTGGCACAACACGAGCTGCTTACCGGGTCGGTGGATGGCAGAGTGAGGCGCTACGACCTGAGAATGGGACAGCTGCACGTTGACTTCATCAGCAGTCCCAtcacatgtgtgtgtttcagtcagGACGGTCAGTGCACTCTGAGCTCCAGTCTGGACTCAACAGTCCGACTACTGGACAAGAGCACCGGGGAAATGCTGGGAGAGTATTCTGGACACAAGATGAAGGGCTATAAGCTGGACTGCTGCCTGTCGAGTAAAGACACCCACGTTCTGAGCTGCTCAGAAGACGGACACGTCTATTTCTGGGACCTGGTGGAAGGATCTTTGTCTTTGAAACTGCCAGTGGGGAAAGCTGTCGTCCAGTCGTTGTCCTTCCACCCCACAGAGACCTGCCTCATCACAGCCATGGAGGGGCGCGTCCAGGTGTGGGGGGCAGAGCCCGAGGAGACGGAGGAGGATGCAGCGGCCACATAGAGAATGGTGAAAGTAGTCCAAAGCCACATTTGCATGctgagaagatttttttttttttttcttctctttttccaaTAACAGTCTGTAAACCTCATCATTTTAAAACCTGATACAACTTATGGTGGCATGATAGCATCTTACTTCCACATTTAGTTTCTTGTGTCTGTAAACACAGGGTTAGGttggaaaaaggaaaaatcgCAAAACATGAAACTGAATCACAAAGCATCAAAGGCTCATGTGGACGGCTTAACTTGAATAAGATCCAAACTgggggtaaaaaaaataaatccacttTGGTCAGAAGTGAGCTACATAGATACACCGTTGATGTCAGGTGCAGCTAACTTCTTAGCCAGATTATCTGTCTTTATGGCTGTTAGCTTTCCAAAGATTTAGCTCTCTGGAGAAGGGAAGCAAATGCTAAACACATACCAGCTGACACAAATAGTGCAAAGTCCACAGATGTAGAGTTCATGATCTGGATGTAAATCTAATTTTAGTTTATGAATGAATCATAACAGTTAACTAAATGATCTAGGActtggatttttgtgtgtgtgaaaacataTATTTTTGTACAAAACCTTGAATAAACGTTTTCTTGTATAAATGACA

Function

symbol description
wdr83 Predicted to be located in cytoplasm. Is expressed in lens and solid lens vesicle. Orthologous to human WDR83 (WD repeat domain 83).

NR:

description
PREDICTED: WD repeat domain-containing protein 83

GO: NA

KEGG:

id description
K13124 MORG1; mitogen-activated protein kinase organizer 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803581.1 True 1754 mRNA 0.47 10 10647077 10655066
XM_039803590.1 False 1741 mRNA 0.48 10 10647077 10655066

Neighbor

gene id symbol gene type direction distance location
ccdc130 ccdc130 coding downstream 15350 10625324 ~ 10631727 (-)
LOC120567745 LOC101486982,LOC102213734 coding downstream 23062 10579285 ~ 10624015 (-)
LOC120567750 LOC103370659 coding downstream 75307 10497323 ~ 10571770 (-)
LOC120565745 NA coding downstream 465090 10172085 ~ 10181987 (-)
atpv0e2 LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 coding downstream 1059111 9578442 ~ 9587966 (-)
ier2b NA coding upstream 269605 10924671 ~ 10926308 (-)
man2b1 man2b1 coding upstream 367528 11022594 ~ 11047950 (-)
LOC120555815 LOC103383434 coding upstream 398921 11053987 ~ 11076146 (-)
gtpbp1l LOC101485704,LOC102291158,LOC102198385,LOC103371799,LOC100709644 coding upstream 1012461 11667527 ~ 11685699 (-)
LOC120555467 LOC103371801,LOC104957815,LOC100709917 coding upstream 1039435 11694501 ~ 11696303 (-)
G3493 NA non-coding downstream 22015 10624780 ~ 10625062 (-)
LOC120559609 NA non-coding downstream 434202 10211424 ~ 10212875 (-)
G3439 NA non-coding downstream 486268 10159224 ~ 10160809 (-)
G3424 NA non-coding downstream 546679 10099057 ~ 10100398 (-)
G3421 NA non-coding downstream 547815 10088618 ~ 10099262 (-)
G3498 NA non-coding upstream 2270 10657336 ~ 10662561 (-)
G3557 LOC103372545 non-coding upstream 178504 10833570 ~ 10833876 (-)
G3566 NA non-coding upstream 223625 10878691 ~ 10878890 (-)
G3580 NA non-coding upstream 228081 10883147 ~ 10883412 (-)
G3581 NA non-coding upstream 230764 10885830 ~ 10886075 (-)
LOC120559237 LOC103359075 other downstream 435773 9858080 ~ 10211304 (-)
G3373 LOC103359075 other downstream 605073 9840590 ~ 10042004 (-)
G3312 LOC103374337,LOC102079284,LOC102799559,LOC102201385,LOC101477163,LOC105417663,LOC102294705,LOC105931228,LOC103374338,LOC104930029,LOC108246298,LOC103154480,LOC107382397 other downstream 1006563 9508604 ~ 9640514 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 1079232 9525261 ~ 9567845 (-)
G3011 zbtb45,LOC100704009,LOC108245322,LOC107382413,LOC105931202 other downstream 1738991 8905672 ~ 8908086 (-)
G3586 LOC104950333 other upstream 244492 10899558 ~ 10905235 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other upstream 311296 10966362 ~ 10993201 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 1986947 12642013 ~ 12659983 (-)
LOC120561813 NA other upstream 2149436 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 2205218 12860284 ~ 12860355 (-)

Expression


Co-expression Network