notum1b (notum,LOC103356199,LOC102201337,LOC102290801,LOC107090768)


Basic Information

Item Value
gene id notum1b
gene name notum,LOC103356199,LOC102201337,LOC102290801,LOC107090768
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 16985394 ~ 16995641 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803681.1
TCAACAGGTCGTCAGTGAAACTGGGCTGAACTACTGAAAAGAGGGACTTGAAGTACGCGCGTAATGACAGTTATACTGGCTCCTCGCGAATTCAGGACTAAAAAGATGTGGGAACTGCACGTGCATTTGAGGTGAATTTTAAACCAGCTCTCCATCTCTCATTGTACCATGGAGAACCATAACCTGAGTTCATTCTGCACACCTTTCATGAACGATAACTTCCAAGAAGTCTCTGTGCGTTTCCAAAGAACTTTTCACTTTTCTAACGACTCTTAGGACATGTTGTGTTTCACTGTCTCACTGTTCACAAGTCTCTTAAGTGCACACATTTGAAAGACGCAATTACATTTAGACAATTAGATATGCAGAGCCGTGGCGTGGTGAAAAGCCGGGCCGGTCTGTCCGCGGTGcgctgctgtttgctgctgctcTTCATCCATATGAGCGCACCGGTGGAGGCGAGGAGGGTACACGGCGCTCGGGCGCAGAGTCGGcgggtgcagcagcagcagcagcctccgGCACACAGGGAGCGGGTGGAAGGAGCAGAGAGCTTCCCGTTAGACTTTACAGCCGTGGAGGGCAACATGGACAACTTCATGGTACAGATAAAGAACTTAGCGCAGTCACTGTACCCGTGCTCTGCGCAGAAGCTGGATCAAGACATGAAGTTGCACTTTTTGAAGAATGTATCTGTGACTTGCAATGACGGTTCAGCAGCAGGATACTACATCAAGGAGTCTAAAGGCAGCAAGAGGTGGCTGCTGTTCTTAGAAGgtggatGGTACTGTTTCAACAGGCAGACCTGTGACAGCAGGTATGAGACGTTGAGGAGACTGATGAGCTCCACCAAGTGGCCACAAACCAAAACAGGAACAGGAATCCTGTCTCCCCAGCCAGAGGAAAACCCTCACTGGTGGAACGCCAACATGGTCTTCATCCCGTACTGCTCCAGTGATGTGTGGAGCGGCGCCACACCGAAGACAGATCACAGTGATTATGCGTTCATGGGCTCTCTGATTATTAAGGAGGTGGTGAACGAACTGCTGACAAAAGGACTGGACAACGCCAAGGTTCTGCTTCTGGCAGGAAGCAGTGCGGGCGGTACAGGTGTCCTGCTGAATGTGGACCACGTTGCAGAGCAGCTGGAGTCGCAGGGCCACCGAGGGGTGCAGGTCAGGGGCCTGGCTGACTCCGGATGGTTCCTGGACAACAAACAGTACAAATTAACAGACTGCCTGGACACCATCAGCTGTGCCCCCACTGAGGCCATAAAGAGAGGCATCAGGTACTGGGGCGGTCTGGTTCCAGAGAGCTGCAGACAGGCTCATGTGGGAGAGGAATGGAACTGTTTCTTTGGATATAAAGTCTTCCCCATGTTAAAAAGCCCGGTGTTTGTGGTGCAATGGCTGTTTGACGAGGCCCAGCTGACGGCCGACAACATCCACCTGACCGGGCAGCCCGTTCACGAGGGCCAGTGGAGGTACATACAGAACCTGGGACAGGAGCTGAGGAGTACACTACATGACGTACCGGCGATGTTTGCTCCGGCCTGTCTGACGCATGAACTCATTACTAGAACCTACTGGATGGACATTCAGGTGAAAGGCACCTCTCTGCCCAGAGCCCTCCACTGCTGGGACCGCAGCCTCCAAGCCAACAACCACATCAACGGCAGCAACCACAACCACCAAAAGCACAAGACCCAGCCTATGAGGGGTTGCCCTCTacatttgattgacagctgccCGTGGCCACACTGTAATCCCTCCTGCCCGACTATTCGGGACCAGCTGACGGGACAGGAGATGAGCGTGATCCAGTTCCTGAAGCACTTGGGCTTTGACGTGCAGAAGATGGCCCAGCAGCAGGGGATGGACCCCAGGAAACTACTGGGCATGCTCAATAACGGGAGCTGagtggcttctttttttttttttttttaaagcgcaGCAATGTTAGCGTAGCATCAGTAAGCCATTCTTCAGAGATAAGAAGATGTTGAACATCGATGGAAGACAACGGGAAAACATGAAAACAGAACTCCAATGAGAAAACTGTGAATACTTCCAAACATAGTCTTCCATCAATAACAAGCAAGACTCAGCTTTTGAAAAACTGAACGACTCAAAAATGTACAAGTGCCTGATAAGTTTTGAAGATATTGTTGCGTGAAATACAATCAAACCAGAACGTTTGAGCTGTTTAAACAACATGAGATCACTTGTTTTAACATATagacagatactgtatatactgtagacaTGCTA
>XM_039803688.1
ACGAGGACCTGAACCAATGAGTCAACAGGTCGTCAGTGAAACTGGGCTGAACTACTGAAAAGAGGGACTTGAAGTACGCGCGTAATGACAGTTATACTGGCTCCTCGCGAATTCAGGACTAAAAAGATGTGGGAACTGCACGTGCATTTGAGATACTACATCAAGGAGTCTAAAGGCAGCAAGAGGTGGCTGCTGTTCTTAGAAGgtggatGGTACTGTTTCAACAGGCAGACCTGTGACAGCAGGTATGAGACGTTGAGGAGACTGATGAGCTCCACCAAGTGGCCACAAACCAAAACAGGAACAGGAATCCTGTCTCCCCAGCCAGAGGAAAACCCTCACTGGTGGAACGCCAACATGGTCTTCATCCCGTACTGCTCCAGTGATGTGTGGAGCGGCGCCACACCGAAGACAGATCACAGTGATTATGCGTTCATGGGCTCTCTGATTATTAAGGAGGTGGTGAACGAACTGCTGACAAAAGGACTGGACAACGCCAAGGTTCTGCTTCTGGCAGGAAGCAGTGCGGGCGGTACAGGTGTCCTGCTGAATGTGGACCACGTTGCAGAGCAGCTGGAGTCGCAGGGCCACCGAGGGGTGCAGGTCAGGGGCCTGGCTGACTCCGGATGGTTCCTGGACAACAAACAGTACAAATTAACAGACTGCCTGGACACCATCAGCTGTGCCCCCACTGAGGCCATAAAGAGAGGCATCAGGTACTGGGGCGGTCTGGTTCCAGAGAGCTGCAGACAGGCTCATGTGGGAGAGGAATGGAACTGTTTCTTTGGATATAAAGTCTTCCCCATGTTAAAAAGCCCGGTGTTTGTGGTGCAATGGCTGTTTGACGAGGCCCAGCTGACGGCCGACAACATCCACCTGACCGGGCAGCCCGTTCACGAGGGCCAGTGGAGGTACATACAGAACCTGGGACAGGAGCTGAGGAGTACACTACATGACGTACCGGCGATGTTTGCTCCGGCCTGTCTGACGCATGAACTCATTACTAGAACCTACTGGATGGACATTCAGGTGAAAGGCACCTCTCTGCCCAGAGCCCTCCACTGCTGGGACCGCAGCCTCCAAGCCAACAACCACATCAACGGCAGCAACCACAACCACCAAAAGCACAAGACCCAGCCTATGAGGGGTTGCCCTCTacatttgattgacagctgccCGTGGCCACACTGTAATCCCTCCTGCCCGACTATTCGGGACCAGCTGACGGGACAGGAGATGAGCGTGATCCAGTTCCTGAAGCACTTGGGCTTTGACGTGCAGAAGATGGCCCAGCAGCAGGGGATGGACCCCAGGAAACTACTGGGCATGCTCAATAACGGGAGCTGagtggcttctttttttttttttttttaaagcgcaGCAATGTTAGCGTAGCATCAGTAAGCCATTCTTCAGAGATAAGAAGATGTTGAACATCGATGGAAGACAACGGGAAAACATGAAAACAGAACTCCAATGAGAAAACTGTGAATACTTCCAAACATAGTCTTCCATCAATAACAAGCAAGACTCAGCTTTTGAAAAACTGAACGACTCAAAAATGTACAAGTGCCTGATAAGTTTTGAAGATATTGTTGCGTGAAATACAATCAAACCAGAACGTTTGAGCTGTTTAAACAACATGAGATCACTTGTTTTAACATATagacagatactgtatatactgtagacaTGCTA

Function

symbol description
notum Enables palmitoleyl hydrolase activity. Involved in negative regulation of Wnt signaling pathway and protein depalmitoleylation. Acts upstream of or within bone development and regulation of bone mineralization. Predicted to be located in endoplasmic reticulum lumen and extracellular region.

NR:

description
PREDICTED: protein notum homolog

GO: NA

KEGG:

id description
K19882 NOTUM; O-palmitoleoyl-L-serine hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803681.1 True 2270 mRNA 0.50 11 16985394 16995620
XM_039803688.1 False 1698 mRNA 0.50 11 16985394 16995641

Neighbor

gene id symbol gene type direction distance location
tmc8 LOC103356194 coding downstream 19169 16957612 ~ 16966225 (-)
LOC120556225 NA coding downstream 28062 16946866 ~ 16957332 (-)
syngr2b syngr2,LOC107090770 coding downstream 39532 16936801 ~ 16945862 (-)
afmid afmid,LOC102792082 coding downstream 60796 16907096 ~ 16924598 (-)
cant1b LOC104922273,LOC104950180 coding downstream 80726 16895705 ~ 16904668 (-)
npb npb coding upstream 157281 17152922 ~ 17154504 (-)
sgsh sgsh coding upstream 160090 17155731 ~ 17161156 (-)
LOC120559819 NA coding upstream 250908 17246549 ~ 17256447 (-)
LOC120569451 NA coding upstream 291325 17286966 ~ 17291473 (-)
si:ch211-196h16.12 LOC101466180,LOC100708390,LOC102193965,LOC103356221,LOC103465598 coding upstream 339296 17334937 ~ 17338618 (-)
G5202 NA non-coding downstream 13151 16967909 ~ 16972243 (-)
LOC120568012 NA non-coding downstream 64668 16917074 ~ 16920726 (-)
G5140 LOC103362533 non-coding downstream 142391 16762368 ~ 16843003 (-)
G5125 LOC103362543,LOC101066958,LOC101475774,LOC104921624,LOC102209940,LOC103384338 non-coding downstream 333868 16649045 ~ 16651526 (-)
G5079 mettl26 non-coding downstream 632926 16350067 ~ 16352468 (-)
G5242 NA non-coding upstream 55987 17051628 ~ 17051857 (-)
G5261 NA non-coding upstream 64520 17060161 ~ 17060543 (-)
G5264 NA non-coding upstream 66269 17061910 ~ 17062119 (-)
G5265 NA non-coding upstream 67427 17063068 ~ 17065526 (-)
G5267 NA non-coding upstream 74536 17070177 ~ 17071728 (-)
LOC120558720 NA other downstream 637472 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 1299755 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2081165 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 2266292 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 2942884 14018902 ~ 14042510 (-)
LOC120569099 NA other upstream 416412 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 714998 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 821866 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 840263 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 884227 17879868 ~ 17881759 (-)

Expression


Co-expression Network