LOC120561952


Basic Information

Item Value
gene id LOC120561952
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 23170807 ~ 23173617 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805339.1
tttgcCCATTGACATATTTTGCCTCGAGAGTTGTAGTTGTAGCGCCCGCCaacaaaactaaagaagaagaagagtttgccataataataataattaaaaaaaaaaaaacaacagaagaagaagagaacacACTTTGGAGTGCCAGTAGCTACTGGCCcgagaattgattttaaaacattttatttcaactTTTCCAAAATGGCATCAAAACCTAGCAAAGAAGAACCCTTTGCATTAATCCTGGAAAGTGACGATGATGGGGAATCAGGAGCAGAGAGTTTTCTCACGGATGAAGAGATGGCTTATCAAGAGGGGTTTGACCCAGCTGAGGATTTTGACGATGAGCAACAGGAATCTGAAAAGCCTAGCACCTCGGCTGTAGGACAACAAGCCAGCCCCCCTGCTTCTTCAGAAAGAAAGCAGCCACCCCAGAATGGGAAAGATTGTGGACATGTGCAGCCTGAAGCAGAACCTCGTTCTCCACAACACCGCCGGATACTGGTACCCAGGTCCAGGTGTGCACGAGGTGTATCAAGAGACCAGTCCAGATCCAGATCTCCACTTCGGAGGCAGTCACAGCCACAGCCAGTACACTCAGTCACATCCTGGAAAACTGAGACGGACCCTGATGTATGTCCAGTGCCAAAAATGTTCATGCCAGCAAGACCCCCTGGACATCAACTGAACTCGGGCACCAAATACTCACCACTGGATCTTTTCAAACTGTTTTTTAGCAATAGCGCAGTTCAAACAATTTGtcaacacacaaataaacaagcTGCTAAAGACATTGCAAAAGGCAAAAGATATTCCTGGACTGACATCAACTGCCAGGAGTTTTTCAAGTATGTGGGACTGAATTTCTTCTTTGCTCTGGTGAAACTCGACAATATCCAGGATTACTGGAAAAAGAGCACCATTTTCAGCGTGCCGTTTCCAGCCAATGTGATGCCACGGGACAGGTACCGGATGATATCTTGGAACATCCACATGAGTGATCCTGAGAAAGATGTGGAGAATGACCAAAAGAAGGGGACACCAGATTATGACCCCCTGTTTCAACTGAAACCCCTTCTGGACACCATCAAAACTGCTTGCAAAGCATTTTACCACCCCAGACGGAACCTTTCAATTGACAAGAGGATGGTGGCTACAAAGGCCCATATTGGAACGACACAATACATAAAAGCGAAGCCGATCAAGTGGGGTTTTAAGCTCTTTGTGTTGGCTGACAGCAGCAATGGCTACACCTGGGACTTTGCTGTGTACACTGGGAAGTCCCAGTTGGCCTCAGGCGTTGGCCTTGCATATGACTCTGTCATGTCCCTGATGAAGACGGCATACCTGGGTAGTGGCTTTCATCTATATGTGGAtcatttctacaccagtccaaaACTCTTCAAGGAACTGTTGAGCCTGAATATTGGAGCATGTGGCACGTACAGAGACACCAGAAGAGAATGCCCCCGCACAAACTCAAATGCTCTGAAGAAAAGCGATCCCAGAGGCTCCATCAGGTGGATCCGTGACGGCCCACTACTTTTTGTGAAGTGGATGGACACACGTGAGGTCTCTGTCTGCTCCACAATCCACGAGGCATTCTCTGGAAGCACCCTGCATAAGAGGATGAAAACTAAGGATGGCAGCTGGACCACCAAATCTATTCCATGCCCAACACCTGTTGTGGAATATAACCGGCACATGGGAGGCGTTTATTTGTCTAACCAGCTGATCCAGTGCTACTCTGTACATCACAATAGCATGCGCTGGTACCGGACATTGTTTTTCCACTTCCTGGACATTGCAGCTACAAACAGCTTCCTCCTACACAAGGAgctctgcagagagaagcaggaGGAACCCATGACCCACAGAGCCTTTCTGCAGGAGCTGACAGCCCAGTTGTGCGGCGTCACAGTTGTGACCCCTCCAGCCCAGGCACACAGCGGCCACTTACCCGTGGCAATCTCAGAACAGACTGAATTAAGCAAGAGGGCCTCGTATGGGCGCAGGACCTGTGTACACTGCAGGAAGACCAAGCAGGTGAGGCAGTCTACCCCCTGGAAGTGCATGGAGTGTGACGTGGCCCTCTGCGTCATTGCAGACAGAAACTGCTTTCGGGACTGGCACAACTAACTTTTGTCTGAAATAATTGTAAAAAGCTTTTTGATCTGTGTTGGTTGCAGTGTTTATTCCCTCTTCACTATTGTCCTGTGTCATTTGAATAAACACGTGAGATTCAGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805339.1 True 2247 mRNA 0.48 2 23170807 23173617

Neighbor

gene id symbol gene type direction distance location
mchr1a LOC103354888,LOC104947992,LOC102295449,LOC102791021 coding downstream 172827 22993868 ~ 22997980 (-)
stx8 stx8 coding downstream 336343 22785495 ~ 22834464 (-)
pik3r5 pik3r5 coding downstream 449992 22692787 ~ 22720815 (-)
LOC120558762 LOC108242699,LOC106536899,LOC103354898,LOC100703987,LOC103383580 coding downstream 505594 22654181 ~ 22665213 (-)
si:dkey-45d16.4 LOC104950130 coding downstream 529063 22635884 ~ 22641744 (-)
LOC120546964 NA coding upstream 246663 23420280 ~ 23431271 (-)
znf207b znf207,LOC104947983,LOC103374438 coding upstream 257320 23430937 ~ 23438268 (-)
rhbdl3 rhbdl3,LOC102785192 coding upstream 265214 23438831 ~ 23501859 (-)
rhot1b LOC103373013,LOC101484650,LOC100702459,LOC102784702,LOC102202739 coding upstream 335168 23508785 ~ 23524162 (-)
LOC120562252 adap2,LOC102784227 coding upstream 351715 23525332 ~ 23532042 (-)
LOC120556418 NA non-coding downstream 35032 23130454 ~ 23135775 (-)
G6907 LOC107382332,LOC106515271,LOC102218172,LOC108242722,LOC103383557 non-coding downstream 112657 23053319 ~ 23058150 (-)
G6880 usp43 non-coding downstream 197481 22972882 ~ 22973326 (-)
G6879 NA non-coding downstream 236916 22924831 ~ 22933891 (-)
G6834 NA non-coding downstream 517021 22651532 ~ 22653786 (-)
G6947 LOC104947985,LOC103354881 non-coding upstream 76578 23250195 ~ 23253876 (-)
G6986 NA non-coding upstream 234660 23408277 ~ 23409202 (-)
G6993 NA non-coding upstream 253895 23427512 ~ 23429145 (-)
G6995 NA non-coding upstream 334657 23508274 ~ 23508560 (-)
LOC120555765 NA non-coding upstream 393143 23566760 ~ 23571034 (-)
G6924 NA other downstream 5870 23088500 ~ 23164937 (-)
G6881 usp43,LOC104947996 other downstream 182307 22981925 ~ 22988500 (-)
LOC120565362 pik3r6 other downstream 478474 22665375 ~ 22692333 (-)
LOC120556502 LOC104944681,LOC103364456 other downstream 835224 22328519 ~ 22335583 (-)
G6592 ube2o,LOC106534564 other downstream 1460995 21708540 ~ 21709812 (-)
G6943 NA other upstream 40239 23213856 ~ 23242290 (-)
G7065 NA other upstream 399088 23572705 ~ 23573049 (-)
LOC120557242 NA other upstream 538210 23711827 ~ 23720750 (-)
si:ch211-207j7.2 NA other upstream 560747 23734364 ~ 23746031 (-)
G7071 NA other upstream 578409 23752026 ~ 23768841 (-)

Expression


Co-expression Network