tmc8 (LOC103356194)


Basic Information

Item Value
gene id tmc8
gene name LOC103356194
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 16957612 ~ 16966225 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805535.1
CGTATGTGGACAAATTTGACTTCTGCTCCACCAGCCCGAAAGTGAGCCACACCAACAGGACTTGAGGAACCAAACTAACTCCATATCAGCCGCTTAGGAGTCCTCACTTCAGTGGAGCGTTGATGTGGGGTGCAAAGCAGGATATTCTGATGCAGATTGCGGAAGTAAAATTTTTTTAGAACTTTAAGTTGCAGCTTTGGTGGAGATATTTGTCGACTTGTGTTTTATATGAAGAGACTATTGGTGTTTGAACATTTGCTATTAAAGAGGAAGTGCAGGGAGAAATAAAATGGAGGAGCACAACAATGTCAACTTCATGAGACTTCTGTCAGATGAGAGCAATCGTTCCACTGTGTCGTCGGACTCCTGTGAGTACTATCAGACAGAGATATTTGATCAGCTGCCCAGCATCCAGGCCAGCCGGCCCGAGCAGGACAGACAGTGTCGTTGGGAAGCCTCCGAGGCCTACCAGGATGTCCCAGAAGTGGGGGAGAGGATCAGCCGTGGCCTTCTGTCCAGAGGACCCAAAGACAAGGCATCTACACAGCCGCTCAGGAACATGGTCATGTGTATTCAGGGGAAGAGAGACGCCAGGGACAGGAGGAAGATGCAAATCAGCAGTATTGGTTTTTGGGAGTCTTGGAGGCGGAGCCAGAGCATCAACTGGAAGAGGGGTTGGGCGCAGATGGGAGGAACTCTATCAGGCCTGTTGCCATGGCAGCGCTCTCTCCACGCCATCGAAGGCAGGTTTGGAGTTGGCGTGAAGGCTTACTTTGTTTTCCTCAGATATCTGGTTTACATGAACATACTTCACTGTGCTCTTATCTGCGGTTTCATCCTGGGGCCTACAACATTTTATGGCAGGAGCAACAGCAGTGAACCTTTGAAGTTTGGAGGCAATGACTCCTATTTGGATTTCTTCCTGGGAACGGGCTACCTGGATCGTTCTCCGGTCTTTTTTGGTTTCTATACCCGTGGCTCCCTGGATTTGCCATGCTTGAACACACCTCTGCTGTACCTCGCTGGAATTCTCACCATCTTCTTCCTCAGTCTCATCCTGGTGGTCCGGCGAACAACGGTTGGCTACAAGCACACCTGGATGCTCGGGAAGCGTTACAGTATGAACGTGAGCTACAAGATCTTTTGTGGTTGGGACTTCACCATCCAGGACCCTGCTGCTGCTACTCTCAAACACAGCTTCATCAGAAACGATCTCAAGCTGTTCCTGGAGGAGCAGAGTTTCTCCTTGCGCGAGGCTCAGAGGACACTTGGACAGAGGGCGCGTCTCTTCCTGCTCAGGTCCGTCCTCAACCTGCTCGTTCTGTCTCTGCTGGCTGGAGCCTTCTACCTAATCTACATCGCCACAAAAACATCAGGTGACGAGAGTATGCACTACTGGTTGGTCAGTTTGGTCCTGGAGTACCTCCCTCCCATCACCATCACCTTTGTCAACCTGGTCCTCCCTCACATTTTCCGCAAGATCTCATCTTTTGAAGACTACTCTTTCACAATGCAGGTCAATGCCACCCTTGTGAGGAGCATCTTCTTGAAGCTGGCCTCACTGGGAATCTACTTATTTTTCACCTTAAAAACAGAACATCAGCAATGCGGGGAGAACATGTTTGGTAGAGAGATGTACAAGTTGTGTATCTTCAACTTCCTCGCCAATTTCTGCAGCGCCTTTCTCTTGAACTACCCCAGGAAGATGATGCAGGAGAAGTACCCCTCATCATTGCTGTCCCGGTTGTTGGGGAAACAGCGCTTCCTGATCCCTTTCTATGTGTTGGATCTGGTGTACAGTCAGACTGTGTTCTGGGTGGGAGTCTACTACTGCCCTCTACTGCCTCTGATAGGAACTGTCATACTGATGGGCACCTTCTACATCCAAAAGTTCATGGTCCTGCGGTGCTGTGTGGCAGAGCAGAGGATGTTTCGAGGCTCCAGCTCCTCCGTTTTATTCCACTTTATGTTGCTGCTCGGTCTCATCATGGCTGCAACTACACTGGGCTTCAACCTCTACCACCAAAAAGACACACACGACAAAAACATGCGGTTGCCCTGTGGTCCATTTGGAAATGGAAAAACTATGTTTAATGTTACAGAAAGGTGTGTGAACAGTCTCCCAAGCCTGGCACAGACCACTCTCCGCTACCTGGCATCTGAGGCCTTCGCCCTGCCGCTCATACTAGCTGAGATTATAATCTTAACCTCATATGTGTCACGGGGACGAGCCAATCAGAAGGCCATCGAGAGACTAAAAGACATGTTGGTTATGAGCAGCTCAGATAAGCGTTTCCTGGTAAAGCAGCATGCCACAATGCTCAGACGTCAGAGAAACCCCCACAGAGTCCATTCTGCAGCCATCGAAGAGGACGTCCCCCCTCCACCACTCTAAGGACCCCCACCCTCTCAATGGCTGATTAACTGATTAAAGTCCCCAACTGTCCGGCCTGGCCATCCAAAGACTTCCACTTAAAAATAAAGCCTTGTTATGGCCGACCACAGCTGGGACTGgtggctgaaaataaaaaatccaagGACTGATGAACTGTCACGTTTCCAGTAACATGATACACAAAGATAAGAAATGCAGTTGTGGCCTCTTTCTGCAAAGGTCTTATTTTAACATTCATATGCCATGTCATAtagccatcggagtgtaaatgtgtgtgagtgtttatctgatgagcaggtggcaccttgtatggcagcctcggccacagcgtgtgaatgtgtgtgaatggtgaat

Function

NR:

description
transmembrane channel-like protein 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805535.1 True 2749 mRNA 0.49 16 16957612 16966225

Neighbor

gene id symbol gene type direction distance location
LOC120556225 NA coding downstream 280 16946866 ~ 16957332 (-)
syngr2b syngr2,LOC107090770 coding downstream 11750 16936801 ~ 16945862 (-)
afmid afmid,LOC102792082 coding downstream 33014 16907096 ~ 16924598 (-)
cant1b LOC104922273,LOC104950180 coding downstream 52944 16895705 ~ 16904668 (-)
ldb1b ldb1,LOC104963201,LOC108444470,LOC104922276,LOC103353370,LOC103150493,LOC100706951,LOC108270891,LOC101479469,LOC107090769,LOC106518772 coding downstream 84122 16843787 ~ 16873490 (-)
notum1b notum,LOC103356199,LOC102201337,LOC102290801,LOC107090768 coding upstream 19169 16985394 ~ 16995641 (-)
npb npb coding upstream 186697 17152922 ~ 17154504 (-)
sgsh sgsh coding upstream 189506 17155731 ~ 17161156 (-)
LOC120559819 NA coding upstream 280324 17246549 ~ 17256447 (-)
LOC120569451 NA coding upstream 320741 17286966 ~ 17291473 (-)
LOC120568012 NA non-coding downstream 36886 16917074 ~ 16920726 (-)
G5140 LOC103362533 non-coding downstream 114609 16762368 ~ 16843003 (-)
G5125 LOC103362543,LOC101066958,LOC101475774,LOC104921624,LOC102209940,LOC103384338 non-coding downstream 306086 16649045 ~ 16651526 (-)
G5079 mettl26 non-coding downstream 605144 16350067 ~ 16352468 (-)
G5081 NA non-coding downstream 607629 16348266 ~ 16349983 (-)
G5202 NA non-coding upstream 1684 16967909 ~ 16972243 (-)
G5242 NA non-coding upstream 85403 17051628 ~ 17051857 (-)
G5261 NA non-coding upstream 93936 17060161 ~ 17060543 (-)
G5264 NA non-coding upstream 95685 17061910 ~ 17062119 (-)
G5265 NA non-coding upstream 96843 17063068 ~ 17065526 (-)
LOC120558720 NA other downstream 609690 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 1271973 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2053383 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 2238510 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 2915102 14018902 ~ 14042510 (-)
LOC120569099 NA other upstream 445828 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 744414 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 851282 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 869679 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 913643 17879868 ~ 17881759 (-)

Expression


Co-expression Network