LOC120562191


Basic Information

Item Value
gene id LOC120562191
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14811342 ~ 14824896 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805767.1
gtcgggctcggacataaatttcttaatgcctgtcgggctcgggccgggttcggacagaaaaattcggcccgatccggactctactTTAAACAATCAGTTACAAACAGGAATAGGCTCTCACAAGTGCAAGATTGGGGAAACtccaaatttaatttaaagccCCACGCAGCAGATCCTCTCCTGTGTGGAAACCCCAGTAATGAGACCACAGAGGCACAAAATATCAACCAGAAAAAAAATGAGCGAtcgaggaggagaagaagaagtgaCTTCATCCTTCAACTGGTCATCAGTTACAAACCAGAACAAAGCCAACGGTTCGACTAACTGTGTATGGAACGACACCTCAGCCCACCCTTTCTTCCTGGTGGTCTACAGTCTGGTGTTCCTGGTGGGTCTCCTCCTAAACGGCTTCATGATGTTTTACTTCTGCCGAGCTCAGCAGAAGCCGTCCAGCAGCATGATGATCTACCTGAGGAACTTGGTAGCTGCTGACTTCCTGCTCTGTCTCAGTCTTCCTATTCGCATCACCAACTACGCCACCAGCTCTGCCACCATCCACCAAGTCAACTGCAACTTTGGCGCCTCCGTCCTCTTCCTCAACATGTACGCCAGCATCATGTTCATGGGCTACATAGCCGCTAACAGGTATCTGAAGGTAGTCCAACCTTTAGGAACTCACATCCTTCAGTCCGTGCGGGTCACTTACATCATCTCCACGGTAACCTGGGTTTTCCTCCTGGCTGTGACATGCAGCTACGTCATCCTGTCGTTCCACACCCAGGAACCTTTTACCTCTGTCCCAGTGAGCTGTCAAGGCTTTCACAGTGGCCAGCACACCTTGCTCTTTAGGATCATACATGTCTCCTCCACTGTCATGTTCCTGTGTGTTCTGGTCTCTCTGGTCTTCTTTTACTACAGCACCTCTCGTAGGGTGTTGCTGGCGCAGCAGAGGCAGCCGGCGTCCTCCAACTCCATGAAGCTTGCAAGGTCGCGCAGGAATATGTTAGTGCTGGTCAGTGTCTTCTGCTTTTGCTTCTCCCCCTACCATCTGATTCGCCTTCCCAAAGCTTTCCTGTGGATGCATTGTTCATGGAGCAAGGTTTTCTACTACGGGATGGAGCTTACCGTCGTAATGTCTGTTCTCAACGTCTGCCTGGACCCAGTCATCTACTTCATCCTCTGCAAGGGGTTCAGAAACCAGCTTAGGCTGGGAGTGGTGCGTGGAAACTGATAATACCCGctcataacatttcaactgcCAACAATGtaataaacaaaatgtaataactgcaaataaagttataaagaaaatgtaataGTAACAGAATAACTGAATAATGTAAGAAAGATTTTAATAAAAACGAATAATGTTAGACAAATTAACTGTTCATAATGTAATATACAAAACGTGGTGTGGGACATCCCGTTGCACCTTCTgccctctgtgtgttgctgttctcaaaatTCCTTCGATACGTGAAACTCCAACAATCTTCAAAATAGCAAgccacacgctgaaaatggcaagttttgaagaacatttctttaacaaagaatatgtttatctaactgggacattttaggACTGATTGAC
>XM_039805776.1
ccgaacccggcccggcccgtcgggtaccgtcgggacccgtcggactcgggtcgggtatccatgccttaatgTGTACGTCTTAGCTAAAATCAACCAGAAAAAAAATGAGCGAtcgaggaggagaagaagaagtgaCTTCATCCTTCAACTGGTCATCAGTTACAAACCAGAACAAAGCCAACGGTTCGACTAACTGTGTATGGAACGACACCTCAGCCCACCCTTTCTTCCTGGTGGTCTACAGTCTGGTGTTCCTGGTGGGTCTCCTCCTAAACGGCTTCATGATGTTTTACTTCTGCCGAGCTCAGCAGAAGCCGTCCAGCAGCATGATGATCTACCTGAGGAACTTGGTAGCTGCTGACTTCCTGCTCTGTCTCAGTCTTCCTATTCGCATCACCAACTACGCCACCAGCTCTGCCACCATCCACCAAGTCAACTGCAACTTTGGCGCCTCCGTCCTCTTCCTCAACATGTACGCCAGCATCATGTTCATGGGCTACATAGCCGCTAACAGGTATCTGAAGGTAGTCCAACCTTTAGGAACTCACATCCTTCAGTCCGTGCGGGTCACTTACATCATCTCCACGGTAACCTGGGTTTTCCTCCTGGCTGTGACATGCAGCTACGTCATCCTGTCGTTCCACACCCAGGAACCTTTTACCTCTGTCCCAGTGAGCTGTCAAGGCTTTCACAGTGGCCAGCACACCTTGCTCTTTAGGATCATACATGTCTCCTCCACTGTCATGTTCCTGTGTGTTCTGGTCTCTCTGGTCTTCTTTTACTACAGCACCTCTCGTAGGGTGTTGCTGGCGCAGCAGAGGCAGCCGGCGTCCTCCAACTCCATGAAGCTTGCAAGGTCGCGCAGGAATATGTTAGTGCTGGTCAGTGTCTTCTGCTTTTGCTTCTCCCCCTACCATCTGATTCGCCTTCCCAAAGCTTTCCTGTGGATGCATTGTTCATGGAGCAAGGTTTTCTACTACGGGATGGAGCTTACCGTCGTAATGTCTGTTCTCAACGTCTGCCTGGACCCAGTCATCTACTTCATCCTCTGCAAGGGGTTCAGAAACCAGCTTAGGCTGGGAGTGGTGCGTGGAAACTGATAATACCCGctcataacatttcaactgcCAACAATGtaataaacaaaatgtaataactgcaaataaagttataaagaaaatgtaataGTAACAGAATAACTGAATAATGTAAGAAAGATTTTAATAAAAACGAATAATGTTAGACAAATTAACTGTTCATAATGTAATATACAAAACGTGGTGTGGGACATCCCGTTGCACCTTCTgccctctgtgtgttgctgttctcaaaatTCCTTCGATACGTGAAACTCCAACAATCTTCAAAATAGCAAgccacacgctgaaaatggcaagttttgaagaacatttctttaacaaagaatatgtttatctaactgggacattttaggACTGATTGAC

Function

GO: NA

KEGG:

id description
ko00640 Propanoate metabolism
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805767.1 True 1597 mRNA 0.47 4 14811342 14824896
XM_039805776.1 False 1463 mRNA 0.47 4 14811342 14824445

Neighbor

gene id symbol gene type direction distance location
LOC120567499 NA coding downstream 4026 14805750 ~ 14807316 (-)
palb2 NA coding downstream 100374 14698682 ~ 14710968 (-)
iqce NA coding downstream 147267 14647019 ~ 14664075 (-)
LOC120567658 LOC103373371,LOC101468855,LOC102204912,LOC104921159,LOC102786911 coding downstream 165490 14616189 ~ 14645852 (-)
LOC120567649 LOC103373062,LOC102206023,LOC101469992,LOC102313636,LOC102077197,LOC102776633 coding downstream 220726 14557895 ~ 14590616 (-)
sh2d3a sh2d3a,LOC104966618 coding upstream 31470 14856366 ~ 14876182 (-)
smcr8b NA coding upstream 215951 15040847 ~ 15052712 (-)
mief2 mief2,LOC102193621,LOC100697825 coding upstream 229555 15054451 ~ 15063940 (-)
alkbh5 alkbh5 coding upstream 240752 15065648 ~ 15070738 (-)
myo15ab myo15a,LOC102296698,LOC101486664 coding upstream 247886 15072782 ~ 15131877 (-)
G4450 NA non-coding downstream 371679 14439456 ~ 14439663 (-)
G4443 NA non-coding downstream 513890 14297089 ~ 14297452 (-)
LOC120558606 NA non-coding downstream 702649 14105951 ~ 14108693 (-)
LOC120558586 NA non-coding downstream 732343 14078317 ~ 14078999 (-)
LOC120558581 NA non-coding downstream 739795 14067848 ~ 14071547 (-)
G4566 NA non-coding upstream 26065 14850961 ~ 14852833 (-)
G4658 NA non-coding upstream 144585 14969481 ~ 14970706 (-)
G4659 actbb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC108244554,LOC106519625 non-coding upstream 146484 14971380 ~ 14973191 (-)
G4663 NA non-coding upstream 174245 14999141 ~ 14999689 (-)
G4670 NA non-coding upstream 188029 15012925 ~ 15013189 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 92240 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 768832 14018902 ~ 14042510 (-)
G4168 NA other downstream 1244076 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 1771062 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 1782949 12990564 ~ 13028393 (-)
ubl5 ubl5 other upstream 76250 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 601648 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 1520822 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 2587157 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 2885743 17710639 ~ 17713898 (-)

Expression


Co-expression Network