LOC120562183 (tekt4)


Basic Information

Item Value
gene id LOC120562183
gene name tekt4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 17677670 ~ 17681784 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805789.1
GCTTCAGGACTGTGGAAACTGTGCATAGCCTACCTGTAGGCCTAGACTAAtttaattgtcaaaaaaaaaaaaatgagctctgAGGTTTTAGTGTCAAGACCTCACTATGACAGCAGAGCAGTGGCTCAGGGAGTCCCGGCGAGAGACCCTCATGTAGAGCCGGATGTCCCGCAGCCGTCCTCGGGCTCAGCCACAGCGGGGTACAGGTCCGCTAAATACCATCCGGCTGAATGGTTCTCAAACTACCGCACCGTGCTTCAGCAGGCCGGGACCCACCGCCACGAAGCCCAGAGCATCCAGCGAGAGTCCAAAACTCTGCACCAGGACACCGAGGCTGCCACTTTGAAGACCCAGGCCGTGGGAACACGTCTTCTGGGAGAGAGACTACAAGAGACCCACTACTGGAAGTCTGAGCTGAAGCGGCACGTCGACAAGCTGCTGGCCGACACAGAGTCGCTGCTGGCGCTGAAAACCAGGCTGGAGAAGGCGCTGGACGCCACCGAGATTCCGTTTGCCATCGCCACCGACAATCTCAACTGCAGGACCAGGAGACCTGGAGCAGACCTAGTCCGAGAcactgtggaggaggagctggTGAAGGAAGTGGACTTGATCAGGAGCATCCAGGCTCTTCTGAAGAGAACTACAGCTCAGGTTGTCACTCAGATCAAgatgAACAGAGAGGCCAAGCAGACGTTGGAGTTGGACTGGTCTGATAAGTACCAGGCCTACAACTTTGATGACCACAGTGGAagatacagtaacatgagcccAGATACACAGCACCACCCAAGCTCAGCCTCCCTGCAGGACCAGGTGTGTAACTGCACATTGTGGACAAAGTTTACACAGGACAACCTGTCCAAGGCCTTGCAGGAAGAACAGGCCACCAACAGTCTCAGagtgctGGTGGAGCGAGTGCTGCAGGACACCACTGACGATCTGAGAGTCCAGTGCTCTAGTGTGGACAGAGCCTTCAGCCAGCGCTGTGCAGAGCTGATAGAGGCCAAAACCCAGCTGGAGATGAAGCACGCACAGGTCTTGGAGCAGATTGGGGCCCAGGAGAGGAACATTGTGGCTCTGCAGCAGGCCATCCACAACAAAGAGGCTCCACTGAGAGTAGCTCAGTCCAGACTTTACCTCCGCTCCCTCAGACCCAACATGGAGCTCTGCAGAGATGAGCCCCAgttcagTTTGGAAGGGGAGGTGAGGCAGATTGATGCCACTCTGGCGTCTCTGCACCAGCAGCTGAGTGAGGCCAGAGGCTCCCTGTCCCACCTGGAAGAGTCACGCATTACAATCGAGAAGGACATTAACTGTAAAACCCACTCACTGTTCATCGAGAGAGACAAGTGCATGACTCACCGTAAACGGTACCCAGCGGTCTCCACACTGTCAGGATACTGAAGACGATGACTctgagtgtttgtgtgaaatTTGCTTTGGTTTTGCTATTTTTCATGTTAAAATCCTGGATTGTTTTGTCTctttgctgtgctgtgctgtaaGGATCTGTGAGATATTGTGTCAGCAAGAAAGCTTTAAAACTATGTATTTTCCGTATGTTTGTATGACTATGTGCTAAAAGCATTTTCATATCCCCCTTAATGTaatgcagaaagaaaaaaaaattagaataataataataataataaataatacattttgtgtttgtgacc

Function

symbol description
tekt4 Predicted to be involved in cilium assembly and cilium movement involved in cell motility. Predicted to be located in motile cilium. Predicted to be active in microtubule cytoskeleton and sperm flagellum. Orthologous to human TEKT4 (tektin 4).

NR:

description
PREDICTED: tektin-4

GO:

id name namespace
GO:0000226 microtubule cytoskeleton organization biological_process
GO:0005874 microtubule cellular_component

KEGG:

id description
K18631 TEKT4; tektin-4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805789.1 True 1679 mRNA 0.51 7 17677670 17681784

Neighbor

gene id symbol gene type direction distance location
LOC120569316 LOC104945333,LOC102299380,LOC102207980,LOC101475478 coding downstream 1468 17657147 ~ 17676202 (-)
crtac1a LOC104945331,LOC103368018 coding downstream 29848 17641306 ~ 17647822 (-)
avpi1 NA coding downstream 60589 17614153 ~ 17617081 (-)
pgam1b pgam1,pgm,LOC104945324,LOC104927840 coding downstream 71368 17602906 ~ 17606302 (-)
exosc1 exosc1,LOC107700859 coding downstream 78822 17594016 ~ 17598848 (-)
LOC120560159 NA coding upstream 11773 17693557 ~ 17754482 (-)
LOC120556506 NA coding upstream 75885 17757669 ~ 17763809 (-)
LOC120560200 NA coding upstream 85139 17766923 ~ 17768175 (-)
LOC120560193 NA coding upstream 91500 17773284 ~ 17779277 (-)
LOC120563097 LOC104965080,LOC103373413,LOC102785880,LOC100703819,LOC102203376 coding upstream 100805 17782589 ~ 17788980 (-)
G5522 NA non-coding downstream 32005 17617187 ~ 17645665 (-)
G5506 NA non-coding downstream 64462 17557841 ~ 17613208 (-)
G5449 NA non-coding downstream 229636 17399905 ~ 17448034 (-)
G5435 LOC104952676 non-coding downstream 326695 17348875 ~ 17350975 (-)
G5430 clg1h19orf53,LOC108236319,LOC103356219,LOC105917105,LOC106917567,LOC102229420,LOC106531096 non-coding downstream 344060 17331757 ~ 17333610 (-)
LOC120560186 NA non-coding upstream 17476 17699260 ~ 17700389 (-)
G5608 NA non-coding upstream 21432 17703216 ~ 17734751 (-)
LOC120560178 NA non-coding upstream 56288 17738072 ~ 17739847 (-)
G5616 NA non-coding upstream 99996 17781780 ~ 17782013 (-)
G5638 NA non-coding upstream 170880 17852664 ~ 17852981 (-)
LOC120569099 NA other downstream 256572 17412053 ~ 17421098 (-)
LOC120558720 NA other downstream 1329748 16345718 ~ 16347922 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other downstream 1992031 15426544 ~ 15685639 (-)
ubl5 ubl5 other downstream 2773441 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 2958568 14712144 ~ 14719102 (-)
LOC120560175 NA other upstream 28855 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 135723 17817507 ~ 17835761 (-)
LOC120556682 NA other upstream 154120 17835904 ~ 17848037 (-)
LOC120556582 NA other upstream 198084 17879868 ~ 17881759 (-)
G5930 LOC102307335,LOC101466373 other upstream 1203184 18884968 ~ 18890220 (-)

Expression


Co-expression Network