LOC120562252 (adap2,LOC102784227)


Basic Information

Item Value
gene id LOC120562252
gene name adap2,LOC102784227
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 23525332 ~ 23532042 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039805874.1
tatgtaaaaaaatataattaattaatatatcaTTTGATGATACTATTCCATATTTATCCTTTTAATccaaaacattttagtttataaaatatgttaaaTTGATATTGACTTAACTACCCAACCATAAAGTAGTTCTTCCACCTCCACCAGctatataatatgaaaatattgctTACACAgaagtctcacattgccagaccttcctccacagcgctgcggaggactTACACAGTAATGCACCACTAATTAGAGGGACCATTAGGCTGCATAATAATTACTTTTAATACTCTAAATTTATTTAGATGATAATACTTACGCTACATACCTTACCtaagtaagattttgaatgGATGACGTTTACATTGTGgtatgtacttttatttaaaagatcTGAACATTTCTTTCATTCCTGCAACATAAGGGGGACCGGGGTTGGTTGTCACACTGCTTATTACAGCTACACTAGAGTCCACTTTGACAATTTATTTGATATTAAACAGTTGTGAGAAGTTGTGAAAATTAAAGGGATACTGATTTCAAGGCAAGACCTTAATGCTAattggtgaagtatccctttcaTTTAATGTAGGAATGACTATTGAAAGATTTTAATGATGAGCAATTTACGCACAAGTAAAAAGTGTGATAACCAACCCTGGTGTCCCCTACACCCTTCAAAATGACCATCATTTTAAGTCAACACCCTGTGAAACAGTGTCAAAAACATTCATGGAGgtggttttttgtttgttttgcaggGCTGTTTAGACTGTATTAGTACCTACCCTCTGAAAATAAACTGGCAGTGTGTCTATTAGCTTGCTTTACAGTTCGCTTGCcccgagcaggtaccatgtaatggaaaaacgccataataCACCAATGCAGcttaaatttagatttaaatacACCAATCTTTCAGCCATCTGTATTGACCTTATGCATTATAGCAACAAGAAAGTGCTCAGACTccattattttgtcttttacaCAGTGGGAATGTGTTGCATTATTAAGTCAGGCCATATGACCTCTAcagagttgtgtttgtgtgttccaaactttgaaaaaaaaagttgtgaacTTATCAGGAACAGCCAGCAATAGCAACCAAAAcctgaagtggaacaaacaataaatatatacacagacacacacacacacacacacacacacacacacacacacacatacacatgtgtGTTCATTTAGTCTGGCTGATAATACCTCTGCTCAGGTTactaaaaaaagggaaaagtatTATTTGTCCTGCTTTAATAAGGGGGAAAACTGAACAGGAGAGTCAGGAAGGTGTCAGTCAAGCAGAGTCATGTCCTGAGAAGAGTTCTAATTAAGCATAATTGTAAACAATAAGTGGGTGGACCAAAATCTGTAGAGCCTTTAAAACGTTATGTACTTAAATAAGTAAATTATTACAGGTTGTGAAGAGTGGTTGTTTAATGCTTCAATGTATTTATCTACAAAGCCTCCtataagatacattttttatgtctaTCCTGCATTTTAATTAATTGCAAAATATTCTTAAATGAACAAACCTTTATTTTAGATATTTACACTGTACCTGTCCTAACATGacaacacctcacacacacaccagtcaaACTTACAGTTATGAGCTACACACAATTCTATAACTTTCATAGTGTAGGTCACTCTGTTACACTGTGACGTCTGTTTCACTTCCTTTCTCTGTTATTTCTGGTCCTCTGCGTTTGTGTGCAGAACAATAAACTTCATGATGCTGTGCTGGTAAGAGGAAATGCGGTGCCCCTGGCCAGTGAGAAGAAATTCAGTTCTTACACCTGCTACAGAGCAGAGCAGCTCTGTACCATTCAATGTGTGGCATGAGTATGGAGTTAATACCCAGTAGCTCTGTTGTTGGGTTACAACTGTCAATCTGACTGAAGCAAACTACCTTCCCCTATGGCCAGTCTGGAGAGAAACAACAAAATCCTACTTGATTTGGTGCAACAGCCAGGTAACAACTTGTGTGCTGACTGTGGAGCTCCTGaGCCTGACTGGGCCTCCTACACTCTTGGTGTCTTTGTGTGCCTGAACTGCTCGGGGTTGCATCGTAATTTACCTGCTGTCAGCAAAGTGAAATCCATACGTCTGGATTTATGGGATGATTCACTAGTAGAGTTTATGCGGAAGTGGGGAAATTCTGCAGCCAAAGCCATTTATGAAAAGTGTGTCCCTGCCTTCTTCTACCAGCCGCAACAGAAAGACTGCATTGTTCTTAAGGATCAGTGGATCCGTGCAAAGTATGAAAGGAGAGAGTTCACAGGAGAAAACAATTTTCAGCAAGCTTATTGCTCAGACTGGTTTGAGTCAACACTATGGAAGAAGGGGAAAGACAACAAGCAGTTTTTAAAGAGGATCTTCCTGTTGTCCCGGAAAGACTTCACCCTCAGATACTTTATTAAAGAGGATTCCAAGCTTCCCAAAGCTGTCATCTCCATGAAGGACCTGAATGCAGTTTTCCAGCCGGAGAAGATCAGTCACGCCCACGGTCTGCAGATCTCTTACATGCATGACAAACGCACAAGGAATCTGTTTGTTTATCACGAGAAAGGACAGGTAATTGTATCCTTGTTCAATGCTATTCGAGCAACACGCTTGGCATACCTCCTGAAGAAACATCCCACTCTTCGAGATAATGACTTAATATCTCAACTAACGGTAAATTGCCTGAAGGAGGGGTACATGGAGAAAACTGGCCCAACGcaTCGGGAGCCATTCAAGAAGAGGTGGTTCACACTGTGCTCAATGAACAGAAAGCTTCTGTATTTTAAAAGTCCACTGGATGCTACAGAGCAGGGTTCTGTCTTCATTGGCACAGAGAGCCACAGCTACTCTGCTTCAGAGAGCAGCAGGCAGAGCTTGAGGGGAAACCGATGGCGCTGTGGCATCACGCTGGAAACTCCGGAAAGGCAgtttttgtttatgtgtgagcAGGAGCAGGAGCAGAAGGAGTGGCTGGAGGCCTTCAGAAAGGTCATATCTCAACCCATGACCCCAGAGGATTACGCTAATGAAGCCAGCATGAGAAGGGGAAAGTGACTGGAGCAGTTCGACCCGTTGGTTTGCAGGAGTTCAGGATGCAGTAAGAATCGTTTTGGGACATGACAGACTCAAAGCCTCTTCTTCCAAAAGATGCTCCTGAAGCTGTCAGAGGATAAAGAAACATGGTGACAAACTCTCTATTACTGGTGGAACTGCTCGACACCACAGACAAATGATCAACTTCAACACTTTTGCACGGACTAAAGTGTCTGTGATTACACCTTGGCACCTTGGAGAAGTTACTGTCACAGCTGGGACGTTGCTGCACATCAGAAGCTTGATTGCATTGTCTTTGCCACTATGACATTGCATCAAAGAACTCTTTGCaatacattataattacactGGAACCAAatattgtattaattaaaaataagaaTAAGAGAATAACATTGTATGTATAATTTGCAATTGTTCTgtagttattttgtattttatgtttcaCTCAATTTGCACATTTTGAAAGGATTAGGTTAATTTTTTCACACTGTTTAATTTGAGCTGTCTACATAGTTGTGTGAAACTGAAAGCTCTtcataattttaataaaatgtataaacaaTT
>XM_039805878.1
GAGAAACAACAAAATCCTACTTGATTTGGTGCAACAGCCAGGTAACAACTTGTGTGCTGACTGTGGAGCTCCTGGTGAGTACATAGGCTGACAAAGATTCATAACCACGATACATTCTTTTGATATGATAGCAAGCAGCAACATTGTTTGACTGATTTCCAACAATACATGTTTCAAGGACCATTGTATCTGATTTCTGTGTGAGTGaacatgttttctttattaAAGTTAAAAGAATGATGAGCAAGAATGATGAACAGTAACCTGTGCCATCGGGCCATGTTATCTTGTTGTTAAAAGAACTACCTCCAAAGTCATACTTTATAGCCtagtcaattttttttaataaacatttGAAAGGGGAAGTGGTAGCTGCTGTATATTCTGTGGTATTACCTCATTGTTCCCACTTTGTGGCCATCACTGACGAGGACAGTTAATAGAGTCTGTaGCCTGACTGGGCCTCCTACACTCTTGGTGTCTTTGTGTGCCTGAACTGCTCGGGGTTGCATCGTAATTTACCTGCTGTCAGCAAAGTGAAATCCATACGTCTGGATTTATGGGATGATTCACTAGTAGAGTTTATGCGGAAGTGGGGAAATTCTGCAGCCAAAGCCATTTATGAAAAGTGTGTCCCTGCCTTCTTCTACCAGCCGCAACAGAAAGACTGCATTGTTCTTAAGGATCAGTGGATCCGTGCAAAGTATGAAAGGAGAGAGTTCACAGGAGAAAACAATTTTCAGCAAGCTTATTGCTCAGACTGGTTTGAGTCAACACTATGGAAGAAGGGGAAAGACAACAAGCAGTTTTTAAAGAGGATCTTCCTGTTGTCCCGGAAAGACTTCACCCTCAGATACTTTATTAAAGAGGATTCCAAGCTTCCCAAAGCTGTCATCTCCATGAAGGACCTGAATGCAGTTTTCCAGCCGGAGAAGATCAGTCACGCCCACGGTCTGCAGATCTCTTACATGCATGACAAACGCACAAGGAATCTGTTTGTTTATCACGAGAAAGGACAGGTAATTGTATCCTTGTTCAATGCTATTCGAGCAACACGCTTGGCATACCTCCTGAAGAAACATCCCACTCTTCGAGATAATGACTTAATATCTCAACTAACGGTAAATTGCCTGAAGGAGGGGTACATGGAGAAAACTGGCCCAACGcaTCGGGAGCCATTCAAGAAGAGGTGGTTCACACTGTGCTCAATGAACAGAAAGCTTCTGTATTTTAAAAGTCCACTGGATGCTACAGAGCAGGGTTCTGTCTTCATTGGCACAGAGAGCCACAGCTACTCTGCTTCAGAGAGCAGCAGGCAGAGCTTGAGGGGAAACCGATGGCGCTGTGGCATCACGCTGGAAACTCCGGAAAGGCAgtttttgtttatgtgtgagcAGGAGCAGGAGCAGAAGGAGTGGCTGGAGGCCTTCAGAAAGGTCATATCTCAACCCATGACCCCAGAGGATTACGCTAATGAAGCCAGCATGAGAAGGGGAAAGTGACTGGAGCAGTTCGACCCGTTGGTTTGCAGGAGTTCAGGATGCAGTAAGAATCGTTTTGGGACATGACAGACTCAAAGCCTCTTCTTCCAAAAGATGCTCCTGAAGCTGTCAGAGGATAAAGAAACATGGTGACAAACTCTCTATTACTGGTGGAACTGCTCGACACCACAGACAAATGATCAACTTCAACACTTTTGCACGGACTAAAGTGTCTGTGATTACACCTTGGCACCTTGGAGAAGTTACTGTCACAGCTGGGACGTTGCTGCACATCAGAAGCTTGATTGCATTGTCTTTGCCACTATGACATTGCATCAAAGAACTCTTTGCaatacattataattacactGGAACCAAatattgtattaattaaaaataagaaTAAGAGAATAACATTGTATGTATAATTTGCAATTGTTCTgtagttattttgtattttatgtttcaCTCAATTTGCACATTTTGAAAGGATTAGGTTAATTTTTTCACACTGTTTAATTTGAGCTGTCTACATAGTTGTGTGAAACTGAAAGCTCTtcataattttaataaaatgtataaacaaTT

Function

symbol description
adap2 Predicted to enable GTPase activator activity; metal ion binding activity; and phosphatidylinositol bisphosphate binding activity. Acts upstream of or within atrioventricular valve development; heart jogging; and heart looping. Predicted to be active in intracellular membrane-bounded organelle and plasma membrane. Is expressed in several structures, including digestive system; gonad; head; heart; and skeletal muscle. Orthologous to human ADAP2 (ArfGAP with dual PH domains 2).

NR:

description
PREDICTED: arf-GAP with dual PH domain-containing protein 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039805874.1 True 3654 mRNA 0.40 11 23525332 23532042
XM_039805878.1 False 2069 mRNA 0.42 11 23525332 23530081

Neighbor

gene id symbol gene type direction distance location
rhot1b LOC103373013,LOC101484650,LOC100702459,LOC102784702,LOC102202739 coding downstream 1170 23508785 ~ 23524162 (-)
rhbdl3 rhbdl3,LOC102785192 coding downstream 23473 23438831 ~ 23501859 (-)
znf207b znf207,LOC104947983,LOC103374438 coding downstream 87064 23430937 ~ 23438268 (-)
LOC120546964 NA coding downstream 94061 23420280 ~ 23431271 (-)
LOC120561952 NA coding downstream 351715 23170807 ~ 23173617 (-)
atad5b NA coding upstream 3540 23535582 ~ 23541961 (-)
suz12b suz12 coding upstream 11425 23543467 ~ 23556250 (-)
LOC120555782 NA coding upstream 118581 23650623 ~ 23656256 (-)
rab11fip4b rab11fip4,LOC102782519 coding upstream 125295 23657337 ~ 23685439 (-)
LOC120556266 LOC103353763,LOC100700287 coding upstream 534886 24066928 ~ 24068828 (-)
G6995 NA non-coding downstream 16772 23508274 ~ 23508560 (-)
G6993 NA non-coding downstream 96187 23427512 ~ 23429145 (-)
G6986 NA non-coding downstream 116130 23408277 ~ 23409202 (-)
G6947 LOC104947985,LOC103354881 non-coding downstream 271456 23250195 ~ 23253876 (-)
LOC120556418 NA non-coding downstream 389557 23130454 ~ 23135775 (-)
LOC120555765 NA non-coding upstream 34718 23566760 ~ 23571034 (-)
G7067 NA non-coding upstream 44886 23576928 ~ 23577129 (-)
G7069 NA non-coding upstream 52158 23584200 ~ 23584522 (-)
LOC120556236 NA non-coding upstream 405367 23937409 ~ 23943573 (-)
G7141 NA non-coding upstream 483417 24015459 ~ 24055760 (-)
G6943 NA other downstream 283042 23213856 ~ 23242290 (-)
G6924 NA other downstream 360395 23088500 ~ 23164937 (-)
G6881 usp43,LOC104947996 other downstream 536832 22981925 ~ 22988500 (-)
LOC120565362 pik3r6 other downstream 832999 22665375 ~ 22692333 (-)
LOC120556502 LOC104944681,LOC103364456 other downstream 1189749 22328519 ~ 22335583 (-)
G7065 NA other upstream 40663 23572705 ~ 23573049 (-)
LOC120557242 NA other upstream 179785 23711827 ~ 23720750 (-)
si:ch211-207j7.2 NA other upstream 202322 23734364 ~ 23746031 (-)
G7071 NA other upstream 219984 23752026 ~ 23768841 (-)
palm3 NA other upstream 240814 23772856 ~ 23811021 (-)

Expression


Co-expression Network