LOC120562596


Basic Information

Item Value
gene id LOC120562596
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 28995088 ~ 29000920 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806397.1
CTGCCTTTAAGAGGCTCACATTTAAACAAACATCTTGTGAGTTTGTGATATTGTTCTCTGAGTTTCACTCCAAATTGGAAGTGTTGTATCGTTTATTCTGAAGATGAAGTTTGAAAATGTGTTGGCAGAGGTGAATGGCTTTGGGAAATTTCAATTAAGGACAATCCTCTTGACTGTAATTCCTCGTGTGACTTTGCCTTTTCACTTTCTGCTGAATAATTTCATCGCCGTTATTCCATGCCACCACTGCAACATCAGCTCACTGGATGATGGAGGTGTTTTTAGGAATTTGTCGCAGGCAGAGAGGCTTGTTGTTAGTATTCCACTCCAGGCAGATGGGACTCCAAACTCCTGTCAGATGTTTGCAGAGCCTCAATATCATCTGCTGCTCAACTCATCCAACATGACTGACCTACCCACAGTGCCATGTCAGAATGGATGGGTATACGATAACAGCACCTTCAAGTCTTCACTGGCCACAGAGTGGGATCTGGTTTGTGATAAGAGAAGAGTTAACCGAGCCACGGCCACTATCTTCTTCGTGGGGGTCATGCTTGGAGCAGCAGTATTTGGCTATCTTAGTGACAGGTTTGGCAGGAAAATAACACTTCTTGTGTCCTATGTGACAACCACCTTCTTTGGATTTGCAAGCGCTTTCTCAAATAATTTCGCCATGTTTGCCGTCATGAGGTTCTTTACTGGATTTGGACTTTCTGGAATAAGCATTATCACCATAGTGCTTAGTATTGAATGGGTGGATATCAAGCATCGAACTGCAGTAGGTGTTTTAACAAGCATGGACTGGAGTGTTTGTACTGttctgctacctgttgtggccTATTTTGTGAATGACTGGAGGTACCTCACAGCCACAGCTACCACCCCGCTGTTTCTGGCAATGATCTGCTGGTGGTGGCTACCTGAGTCTGCCAGATGGCTGATAAGTAATGGAAAGGTCAACAGTGCTCATTTCTACTTGAGCAAGTGTGCAAAAGTCAACGGCAGAGAGCAGTCCATGGCTGACATAAAGCCTGAGACTCTGTCCAAAGTAATACTtatagaaaatgaaaacagaaaatattcctATTTGGACCTTGTGAGGACCCCCAAAATGAGGAGACTGGCTCTACTTACTGGAATTGTTTGGTTTGGAGTGGCCTGTACGTATTACGGAATCAGCTTGAATGTCAGTGGATTTGGTGTGAACATTTATCTCACACAGTTCATCTACGGCGCAATTGAACTTCCGGCAAAAGCATTTGTCTTTTTCACTTTGAACAAAATAGGCCGAAGGTTGTGTCAGACTGGAACACTCGTTATGACTGGACTGTGTATATTCTGCAACATGTTTGTCCCTCGAGATAACGCGATGTTTCAGACAACTGTGGGAGCTTTGGGCAAGATGTTCGCAGAAGCATCTTTTACAACTGTATTTCTGTACACAACAGAGCTTTACCCCACAGTAATGAGGCAAAATGGATTGGGTTACTGCTCCTTCATGGCCCGTGTAGGCGTGTCTGTTTCCCCTCTGATCATGCTTCTTGAAGAAGTGTGGGGCCATTTACCGAGTACTATCTTCTCCCTGGTGGCTGTTGCTGCAGGGCTGTCAGCTTCTCTTCTTCCTGAGACACAAAACATCCGTCTACCAGAGACTATTGAGGATGTGGAACACACAAGAAGAAgatcaatctccacctctgacgAGAAATCTCAACCCTAAATTTTTTCTTCACTGCAACCAAAAGGCATTTGGCCTTGAGTTGCAGGGCATATCAGTGGTggtaatatgttttaaataataaaagaagaaacaagTGTTTCTTAGATAACCACAACCTGTATAACATTTTTTCAATATAATATTTCAATAAATGTGTGAAATATTTTATAGTACCACTGATTAATGATTGATTTGTTTTGTACAGTGcgatttgttttgttgtttcgGGTATTTTTCTCTTACTTCCCAACAAACTGTCAGCTGCTTATGGTGCATTCATTCAATTGAAAATAAGATGTGAGTTAaaagatactttattgtcatcCATCTGTGTAAAGTGCAGTAAAGTTCATAGAGGAACAAAATTGTGTTTCTCTTGGTCCATAACAAAAAGATAAATGATGCAACATTCATTGAAAGTGAAGCAAACATTTAGACTACACTTAAGGCACAAACATGTAGTGCAATAACAgacaaataaatataagtagTGTAAGCATAAAGTGAGGTAGAGCAGTAGTAACATTAAAAGCAGTTTGTGAAGATATTTATGTATGCAtgattgtacagtatgttgtaaGGTACAAGTAGTCAGACAGTCCAGTATAGTGAGGTAGGGTATGACAGGTTCAAGTTTTCATCCACGTAGTGCTTAGTGGTCACCTAAGTGCCCATAAATTCATCCATCTTGCCAAGATAGCATTCACTGTTTTATCTGGTATATATCATTAATTCATCCATGAATTGCCTAGTGTTGTACTCATCTATTCATGCCTCATTGCAATCATTCATTTATTCCTATCCTCATTAATTATGTGTGTATCATTAGTAGGTAAATAAACATTTGATTGATAAAG
>XM_039806406.1
ACTGCCTTTAAGAGGCTCACATTTAAACAAACATCTTGTGAGTTTGTGATATTGTTCTCTGAGTTTCACTCCAAATTGGAAGTGTTGTATCGTTTATTCTGAAGATGAAGTTTGAAAATGTGTTGGCAGAGGTGAATGGCTTTGGGAAATTTCAATTAAGGACAATCCTCTTGACTGTAATTCCTCGTGTGACTTTGCCTTTTCACTTTCTGCTGAATAATTTCATCGCCGTTATTCCATGCCACCACTGCAACATCAGCTCACTGGATGATGGAGGTGTTTTTAGGAATTTGTCGCAGGCAGAGAGGCTTGTTGTTAGTATTCCACTCCAGGCAGATGGGACTCCAAACTCCTGTCAGATGTTTGCAGAGCCTCAATATCATCTGCTGCTCAACTCATCCAACATGACTGACCTACCCACAGTGCCATGTCAGAATGGATGGGTATACGATAACAGCACCTTCAAGTCTTCACTGGCCACAGAGTGGGATCTGGTTTGTGATAAGAGAAGAGTTAACCGAGCCACGGCCACTATCTTCTTCGTGGGGGTCATGCTTGGAGCAGCAGTATTTGGCTATCTTAGTGACAGGTTTGGCAGGAAAATAACACTTCTTGTGTCCTATGTGACAACCACCTTCTTTGGATTTGCAAGCGCTTTCTCAAATAATTTCGCCATGTTTGCCGTCATGAGGTTCTTTACTGGATTTGGACTTTCTGGAATAAGCATTATCACCATAGTGCTTAGTATTGAATGGGTGGATATCAAGCATCGAACTGCAGTAGGTGTTTTAACAAGCATGGACTGGAGTGTTTGTACTGttctgctacctgttgtggccTATTTTGTGAATGACTGGAGGTACCTCACAGCCACAGCTACCACCCCGCTGTTTCTGGCAATGATCTGCTGGTGGTGGCTACCTGAGTCTGCCAGATGGCTGATAAGTAATGGAAAGGTCAACAGTGCTCATTTCTACTTGAGCAAGTGTGCAAAAGTCAACGGCAGAGAGCAGTCCATGGCTGACATAAAGCCTGAGACTCTGTCCAAAGTAATACTtatagaaaatgaaaacagaaaatattcctATTTGGACCTTGTGAGGACCCCCAAAATGAGGAGACTGGCTCTACTTACTGGAATTGTTTGGTTTGGAGTGGCCTGTACGTATTACGGAATCAGCTTGAATGTCAGTGGATTTGGTGTGAACATTTATCTCACACAGTTCATCTACGGCGCAATTGAACTTCCGGCAAAAGCATTTGTCTTTTTCACTTTGAACAAAATAGGCCGAAGGTTGTGTCAGACTGGAACACTCGTTATGACTGGACTGTGTATATTCTGCAACATGTTTGTCCCTCGAGATAACGCGATGTTTCAGACAACTGTGGGAGCTTTGGGCAAGATGTTCGCAGAAGCATCTTTTACAACTGTATTTCTGTACACAACAGAGCTTTACCCCACAGTAATGAGGCAAAATGGATTGGGTTACTGCTCCTTCATGGCCCGTGTAGGCGTGTCTGTTTCCCCTCTGATCATGCTTCTTGAAGAAGTGTGGGGCCATTTACCGAGTACTATCTTCTCCCTGGTGGCTGTTGCTGCAGGGCTGTCAGCTTCTCTTCTTCCTGAGACACAAAACATCCGTCTACCAGAGACTATTGAGGATGTGGAACACACAAGAAgatcaatctccacctctgacgAGAAATCTCAACCCTAAATTTTTTCTTCACTGCAACCAAAAGGCATTTGGCCTTGAGTTGCAGGGCATATCAGTGGTggtaatatgttttaaataataaaagaagaaacaagTGTTTCTTAGATAACCACAACCTGTATAACATTTTTTCAATATAATATTTCAATAAATGTGTGAAATATTTTATAGTACCACTGATTAATGATTGATTTGTTTTGTACAGTGcgatttgttttgttgtttcgGGTATTTTTCTCTTACTTCCCAACAAACTGTCAGCTGCTTATGGTGCATTCATTCAATTGAAAATAAGATGTGAGTTAaaagatactttattgtcatcCATCTGTGTAAAGTGCAGTAAAGTTCATAGAGGAACAAAATTGTGTTTCTCTTGGTCCATAACAAAAAGATAAATGATGCAACATTCATTGAAAGTGAAGCAAACATTTAGACTACACTTAAGGCACAAACATGTAGTGCAATAACAgacaaataaatataagtagTGTAAGCATAAAGTGAGGTAGAGCAGTAGTAACATTAAAAGCAGTTTGTGAAGATATTTATGTATGCAtgattgtacagtatgttgtaaGGTACAAGTAGTCAGACAGTCCAGTATAGTGAGGTAGGGTATGACAGGTTCAAGTTTTCATCCACGTAGTGCTTAGTGGTCACCTAAGTGCCCATAAATTCATCCATCTTGCCAAGATAGCATTCACTGTTTTATCTGGTATATATCATTAATTCATCCATGAATTGCCTAGTGTTGTACTCATCTATTCATGCCTCATTGCAATCATTCATTTATTCCTATCCTCATTAATTATGTGTGTATCATTAGTAGGTAAATAAACATTTGATTGATAAAG

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K08204 SLC22A7, OAT2; MFS transporter, OCT family, solute carrier family 22 (organic anion transporter), member 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806397.1 True 2577 mRNA 0.41 10 28995088 29000919
XM_039806406.1 False 2575 mRNA 0.41 10 28995088 29000920

Neighbor

gene id symbol gene type direction distance location
LOC120562580 LOC104948618,LOC106456138,LOC103360745 coding downstream 1150 28989216 ~ 28993938 (-)
LOC120562590 NA coding downstream 15360 28977373 ~ 28979728 (-)
LOC120562550 NA coding downstream 45765 28940561 ~ 28949323 (-)
rps6 rps6 coding downstream 109910 28879021 ~ 28885178 (-)
LOC120562501 smu1 coding downstream 126002 28859657 ~ 28869086 (-)
LOC120562611 LOC101485435,LOC102202841,LOC102309575,LOC102784701,LOC103360773,LOC100700121 coding upstream 2349 29003269 ~ 29007156 (-)
fabp2 fabp2,LOC103360827,LOC106535685 coding upstream 51340 29052260 ~ 29054086 (-)
gucy1b1 gucy1b3 coding upstream 66352 29067272 ~ 29083007 (-)
gucy1a1 gucy1a3 coding upstream 83008 29083928 ~ 29093918 (-)
slc25a4 slc25a4 coding upstream 116200 29117120 ~ 29119390 (-)
G8438 NA non-coding downstream 79269 28915567 ~ 28915819 (-)
G8417 NA non-coding downstream 136017 28820304 ~ 28859071 (-)
LOC120562398 NA non-coding downstream 182869 28809425 ~ 28812219 (-)
G8385 NA non-coding downstream 187640 28806945 ~ 28807448 (-)
LOC120562378 NA non-coding downstream 190267 28803978 ~ 28804821 (-)
G8486 NA non-coding upstream 11505 29012425 ~ 29016986 (-)
LOC120562689 NA non-coding upstream 96989 29097909 ~ 29102324 (-)
G8572 NA non-coding upstream 220292 29221212 ~ 29221640 (-)
G8575 NA non-coding upstream 240692 29241612 ~ 29241838 (-)
G8582 NA non-coding upstream 281912 29282832 ~ 29283044 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 1700177 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 2416273 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 2459352 26533833 ~ 26535736 (-)
adamtsl7 NA other downstream 2873439 26112014 ~ 26121649 (-)
polq LOC104947247,LOC104947243,LOC106593755 other downstream 2900844 26075397 ~ 26094244 (-)
rnf24 rnf24,LOC102778784 other upstream 305101 29306021 ~ 29339847 (-)
G8701 NA other upstream 588388 29589308 ~ 29593623 (-)
bnc2 bnc2 other upstream 1574952 30575872 ~ 30744878 (-)
G8975 NA other upstream 1970468 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 2933717 31934637 ~ 32006542 (-)

Expression


Co-expression Network