LOC120562611 (LOC101485435,LOC102202841,LOC102309575,LOC102784701,LOC103360773,LOC100700121)


Basic Information

Item Value
gene id LOC120562611
gene name LOC101485435,LOC102202841,LOC102309575,LOC102784701,LOC103360773,LOC100700121
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 29003269 ~ 29007156 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806416.1
AAATTCAGTTCACTGTCGGAATGTTTAGCTTATTGTGGACTCTGAAAGCACAGGAGCAAAATGAAATTTGACAGCATACTTTCAGAAATTAATGGATTTGGAAAATTCCAAATCAAGCTTGTCTTGATTCAGATGTTATCTCGAATTACTCTGCCATGTCACTTCCTGCTGAATAACTTCATGGCAGCTGTTCCCCCTCACCACTGTAACATCAGTGCTCTGGACGATGGAGGCTTCTTCCGGAATTTGACTCGGGAACAGAAACTGGCTGTTGGTGTTCCGGCAGAGCAGGATGGGACTCCGAGCTCCTGTCAAATGTTTTCAAAGCCTCAATATCAACATCTGTCAGGTTCGAATAATAGTGAGGATGCATTTACTGTTCAGTGTCAGAATGGATGGGTGTATGACAACAGCACATTCAAATCTACTTTGGCAACTGAGTGGGATCTCGTGTGCAGCAGAAAAGGGATGAACAAGGCAACAGCCACCATTTTGTTCATTGGTGTTATGTTTGGAGCCCCTTTATTTGGGTTTCTCAGTGACAGGTTTGGCCGACGGCCGCTGCTGTTGGTGTCTTATTTGTCGTCCCTGACGTTTGCAGTCCTGAGTGCATTCTCTACATCATATGTTATGTTTGTCATCTTGAGGTTTTTTACGGGGATGTCACTCGCAGGAATTAGTATCATCTCTATTGTTCTAAATGTTGAATGGTTTGGTAttgaacacaggaccttctcaGGTATAATCATAAGCCTGGATTGGACACTTGGTAACTGGATTCTGGTTGGAATTGCATACAGTGTTAATCAGTGGAGGCTGCTCATTGTGGCAGTGACCTTACCCTTGATACTGTCCATCATGACTTGGAGGTGGCTTCCAGAGTCTGCAAGGTGGCTCCTGGCAAATGGGAAGGCAGACGCTGCGCATCATTACATAATGCAATGTGCCAAAATGAACAACAGAACCAATTGTATGGCCACCGTCACACCAACGGAATTACTGTTGTCTGCACAGAGTGAAACTAAAGACAAGAAGTACACTTTTGTGGATCTTTTCAAGACCCCAAATATTAGGAAACGTTCTATATGCTTGGGAATAGTATGGTATGGAGTTGCATTTACATATTATGGGATAAGTCTAAATATCACTGGGTTTGGACTAAACATATACCTCACACAATTCATATTTGCATCCATCGAAATGCCAATGAAGATTGGTGTGTATTTCTTCCTGGAGAAAGTTGGCAGAAGGTCTGGCCAGACAGGAGCCCTGCTGTTAACTGGTCTCTGTCTCTTCACCAACATGTTTGTTGCAAaagATAAGTGGGTCATTCGCACTGTTGTGGCTGTCCTTGGAAAATCCATGTCAGAAGCCACATTCACAATCATATTCCTCTTCACAACTGAACTATATCCTACAGTCGTACGACAGAATGGTTTAGGCTACACCTCTTTTGTGGCACGACTTGGCGTATCCATATCTCCACTCATCGTGCTATTGGAGGACGTGTGGCATCTCCTCCCTACAGTCACTTATTGTGCGGTGGCAGTCGGATCCGGTCTAGTGGCTTTGCTCCTGCCTGAAACATTAAAAACCCGCCTGCCACAGTACATTGAGGATATTGAGAAACCAAGGGCACAATCAACAAGGAACAAGGAGATTCAATAAATATCACATGTATTGATAATGACAGTATATTTGTTATGCAATTGATTACGTTTTAATAATTGAAGAGgagttgattttaaaattgttttgaaACAATAGCATTGTTAAAATACCTATCAATACTTGAACCAACAGTCTGTCAGGATTGTGTACTGTCTAAAatccagaagaagaaaaagagaagtgtAACTGTAAATTGACTTGCAGTTGGCAATAAAATTTTACTAAATGAGAA

Function

NR:

description
solute carrier family 22 member 7

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806416.1 True 1903 mRNA 0.42 10 29003269 29007156

Neighbor

gene id symbol gene type direction distance location
LOC120562596 NA coding downstream 2349 28995088 ~ 29000920 (-)
LOC120562580 LOC104948618,LOC106456138,LOC103360745 coding downstream 9331 28989216 ~ 28993938 (-)
LOC120562590 NA coding downstream 23541 28977373 ~ 28979728 (-)
LOC120562550 NA coding downstream 53946 28940561 ~ 28949323 (-)
rps6 rps6 coding downstream 118091 28879021 ~ 28885178 (-)
fabp2 fabp2,LOC103360827,LOC106535685 coding upstream 45104 29052260 ~ 29054086 (-)
gucy1b1 gucy1b3 coding upstream 60116 29067272 ~ 29083007 (-)
gucy1a1 gucy1a3 coding upstream 76772 29083928 ~ 29093918 (-)
slc25a4 slc25a4 coding upstream 109964 29117120 ~ 29119390 (-)
helt helt,LOC102781250 coding upstream 142367 29149523 ~ 29151442 (-)
G8438 NA non-coding downstream 87450 28915567 ~ 28915819 (-)
G8417 NA non-coding downstream 144198 28820304 ~ 28859071 (-)
LOC120562398 NA non-coding downstream 191050 28809425 ~ 28812219 (-)
G8385 NA non-coding downstream 195821 28806945 ~ 28807448 (-)
LOC120562378 NA non-coding downstream 198448 28803978 ~ 28804821 (-)
G8486 NA non-coding upstream 5269 29012425 ~ 29016986 (-)
LOC120562689 NA non-coding upstream 90753 29097909 ~ 29102324 (-)
G8572 NA non-coding upstream 214056 29221212 ~ 29221640 (-)
G8575 NA non-coding upstream 234456 29241612 ~ 29241838 (-)
G8582 NA non-coding upstream 275676 29282832 ~ 29283044 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 1708358 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 2424454 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 2467533 26533833 ~ 26535736 (-)
adamtsl7 NA other downstream 2881620 26112014 ~ 26121649 (-)
polq LOC104947247,LOC104947243,LOC106593755 other downstream 2909025 26075397 ~ 26094244 (-)
rnf24 rnf24,LOC102778784 other upstream 298865 29306021 ~ 29339847 (-)
G8701 NA other upstream 582152 29589308 ~ 29593623 (-)
bnc2 bnc2 other upstream 1568716 30575872 ~ 30744878 (-)
G8975 NA other upstream 1964232 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 2927481 31934637 ~ 32006542 (-)

Expression


Co-expression Network