fabp2 (fabp2,LOC103360827,LOC106535685)


Basic Information

Item Value
gene id fabp2
gene name fabp2,LOC103360827,LOC106535685
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 29052260 ~ 29054086 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806486.1
TGCGTGGTTTAAAAGGAGGGGCAGACTTTGAGTAAGACACTCCTCGCTGCACAATCATCCAGCTCACCCTCACAGCCACCATGACCTTCGACGGCAACTGGAAAATTGATCGCAATGATAACTATGAGAAATTCATGGAACAAATGGGAATTAACATGGTGAAGAGAAAGCTGGCTGCTCACGACAATCTCAAGATAACCATCCAACAGACTGGAGACAAGTTTCATGTCAAGGAGAGCAGCAGTTTCCGCACTCTGGAAATAGACTTCACCCTGGGGGTCACCTTTGAGTACAGCCTTGCAGATGGGACAGAACTATCAGGCTCATGGAACATGGAGGGAGACATGTTGAAGGGGATCTTCAACAGAAAGGACAATGGAAAGCAACTGACAACAACCAGAATAGTCCAAGGAGATGAACTTATACAGAGCTACAACTATGAAGGTGTGGACGCAAAGAGGATTTTCAAGAGGGGTTAGAACAAACTCAACACAACTTTAAAGTGAGATGTTAGACTTCAGGATTACATACAGTATTGTGTCTAATTATACCAACATAACCTGTAAAAAGTGCACTATTTGTAACGCCCATAAAGTATATGAAAAAGATTAGAATTGCACAGGATTTTGATACTTGCACTAATAAAGCCATACTCTAACTgcc

Function

symbol description
fabp2 Predicted to enable fatty acid binding activity. Acts upstream of or within response to lipid. Predicted to be located in cytoplasm. Is expressed in brain; digestive system; and kidney. Human ortholog(s) of this gene implicated in alcoholic liver cirrhosis; carotid stenosis; coronary artery disease; end stage renal disease; and obesity. Orthologous to human FABP2 (fatty acid binding protein 2).

NR:

description
fatty acid-binding protein, intestinal

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG:

id description
K08751 FABP2; fatty acid-binding protein 2, intestinal

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806486.1 True 663 mRNA 0.43 4 29052260 29054086

Neighbor

gene id symbol gene type direction distance location
LOC120562611 LOC101485435,LOC102202841,LOC102309575,LOC102784701,LOC103360773,LOC100700121 coding downstream 45104 29003269 ~ 29007156 (-)
LOC120562596 NA coding downstream 51340 28995088 ~ 29000920 (-)
LOC120562580 LOC104948618,LOC106456138,LOC103360745 coding downstream 58322 28989216 ~ 28993938 (-)
LOC120562590 NA coding downstream 72532 28977373 ~ 28979728 (-)
LOC120562550 NA coding downstream 102937 28940561 ~ 28949323 (-)
gucy1b1 gucy1b3 coding upstream 13186 29067272 ~ 29083007 (-)
gucy1a1 gucy1a3 coding upstream 29842 29083928 ~ 29093918 (-)
slc25a4 slc25a4 coding upstream 63034 29117120 ~ 29119390 (-)
helt helt,LOC102781250 coding upstream 95437 29149523 ~ 29151442 (-)
primpol primpol coding upstream 127975 29182061 ~ 29194904 (-)
G8486 NA non-coding downstream 35274 29012425 ~ 29016986 (-)
G8438 NA non-coding downstream 136441 28915567 ~ 28915819 (-)
G8417 NA non-coding downstream 193189 28820304 ~ 28859071 (-)
LOC120562398 NA non-coding downstream 240041 28809425 ~ 28812219 (-)
G8385 NA non-coding downstream 244812 28806945 ~ 28807448 (-)
LOC120562689 NA non-coding upstream 43823 29097909 ~ 29102324 (-)
G8572 NA non-coding upstream 167126 29221212 ~ 29221640 (-)
G8575 NA non-coding upstream 187526 29241612 ~ 29241838 (-)
G8582 NA non-coding upstream 228746 29282832 ~ 29283044 (-)
G8584 NA non-coding upstream 236214 29290300 ~ 29290813 (-)
lonrf1l lonrf1,LOC103360493,LOC102797331 other downstream 1757349 27281798 ~ 27294911 (-)
smim14 smim14 other downstream 2473445 26567067 ~ 26578815 (-)
LOC120566984 NA other downstream 2516524 26533833 ~ 26535736 (-)
adamtsl7 NA other downstream 2930611 26112014 ~ 26121649 (-)
polq LOC104947247,LOC104947243,LOC106593755 other downstream 2958016 26075397 ~ 26094244 (-)
rnf24 rnf24,LOC102778784 other upstream 251935 29306021 ~ 29339847 (-)
G8701 NA other upstream 535222 29589308 ~ 29593623 (-)
bnc2 bnc2 other upstream 1521786 30575872 ~ 30744878 (-)
G8975 NA other upstream 1917302 30971388 ~ 30974612 (-)
znf827 znf827,LOC102789810 other upstream 2880551 31934637 ~ 32006542 (-)

Expression


Co-expression Network