LOC120562870


Basic Information

Item Value
gene id LOC120562870
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 12274686 ~ 12277084 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039806797.1
GTGTGACAGCGATGGCTCGGCTCACACCTCTTCTCTTTTTGCTGTGGGTCGGTGGAGGACTTTCTGTTCCAGGTGTTACAGTGAGCACAGTGGTGGATCTGCAGAAGAGAATCATTGGAGGTCAAACATGTGAACCAACTGAGCGTCTGTACCATGTGAAGTTGATAATGAATGATGGTACCCATAACTTCTTGTGTGGTGGATCTCTGATCAGTGACCGGTGGATACTGACTGCAGCTCACTGCTGGAAGGGGACTATGACAGCACATTTAAGTGTGCATCCAGGTAACAACAGACAAGACGGAGTGGCAATCACAAGACATGAGACTGTTACAGACGAACTCAGAGACCATGACATCATGCTGCTGGAGCTACCTAACCCAACTAGGATTACACCTGTACCACTTCCTGACATTCCTTCCTGTCAAAATCAGCCCACTGTGCCTCTCGGTGCTACAGTTCAGATTGCAGGTTATGGACCCAAACCTGGCGAAAGACCATCAGATACTCTCCAATGTGCTAACACCGAGGTTGTCAGCTGTACAGATCAAAATGATCAATTTAGGTTCTGTGGCCAAAGAAATGGAGTGGCTCTATGTTCAGGTGACTCTGGTGGAGGAGTGGTGTACAACGGCAGGATTTATGGGATCATTAGGGGCTTGGATCGCACCAATATCTGTACGGAAAAATCTGCATTTGTGAACGTCTGTTCATACAGGAAGTGGATCAAGAAAATCACTGGCCTATAACCCTAGACTGTTATTGAAACAATACTGGGATGTTCGGGGTGTGGTTAACTGTGAAACGTTCTGTCATTAAAATGCATTTCACATGTGTTAGTGAAATAGTTGAGTTAATTTACATTTGCAACTGATACATTTACAATTGATTGGTTACATTAAATGTTCATCTATCATTTGTCAAGCCATTTAAGACAAACACTTGTGATTCTATGATTGTAGTATCACAGGGTAGTCTGAGTTACAAATGTTAATTTACACAATGTTACTGTAGCTATCAAACTGTTGTTATGATAAAAAATGAACACAGTGTTTTTCAACCAAGATatcctcttcctttttttccaaTTAAAACAAATTGGACATTTGCTCTTATGTAAATTCAAACAGAGCATGTTGGAAAAACTATTAAAGGGCCAAATATACCAGTCTGTTGTTTAAAAACAtacttttcacaagtttaatcATTGTGACTTCTTTGACAGAGTTgtcagttaaaataaaatgaagatgACTCACTAT
>XM_039806805.1
TGACAGCGATGGCTCGGCTCACACCTCTTCTCTTTTTGCTGTGGGTCGGTGTTACAGTGAGCACAGTGGTGGATCTGCAGAAGAGAATCATTGGAGGTCAAACATGTGAACCAACTGAGCGTCTGTACCATGTGAAGTTGATAATGAATGATGGTACCCATAACTTCTTGTGTGGTGGATCTCTGATCAGTGACCGGTGGATACTGACTGCAGCTCACTGCTGGAAGGGGACTATGACAGCACATTTAAGTGTGCATCCAGGTAACAACAGACAAGACGGAGTGGCAATCACAAGACATGAGACTGTTACAGACGAACTCAGAGACCATGACATCATGCTGCTGGAGCTACCTAACCCAACTAGGATTACACCTGTACCACTTCCTGACATTCCTTCCTGTCAAAATCAGCCCACTGTGCCTCTCGGTGCTACAGTTCAGATTGCAGGTTATGGACCCAAACCTGGCGAAAGACCATCAGATACTCTCCAATGTGCTAACACCGAGGTTGTCAGCTGTACAGATCAAAATGATCAATTTAGGTTCTGTGGCCAAAGAAATGGAGTGGCTCTATGTTCAGGTGACTCTGGTGGAGGAGTGGTGTACAACGGCAGGATTTATGGGATCATTAGGGGCTTGGATCGCACCAATATCTGTACGGAAAAATCTGCATTTGTGAACGTCTGTTCATACAGGAAGTGGATCAAGAAAATCACTGGCCTATAACCCTAGACTGTTATTGAAACAATACTGGGATGTTCGGGGTGTGGTTAACTGTGAAACGTTCTGTCATTAAAATGCATTTCACATGTGTTAGTGAAATAGTTGAGTTAATTTACATTTGCAACTGATACATTTACAATTGATTGGTTACATTAAATGTTCATCTATCATTTGTCAAGCCATTTAAGACAAACACTTGTGATTCTATGATTGTAGTATCACAGGGTAGTCTGAGTTACAAATGTTAATTTACACAATGTTACTGTAGCTATCAAACTGTTGTTATGATAAAAAATGAACACAGTGTTTTTCAACCAAGATatcctcttcctttttttccaaTTAAAACAAATTGGACATTTGCTCTTATGTAAATTCAAACAGAGCATGTTGGAAAAACTATTAAAGGGCCAAATATACCAGTCTGTTGTTTAAAAACAtacttttcacaagtttaatcATTGTGACTTCTTTGACAGAGTTgtcagttaaaataaaatgaagatgACTCACTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039806797.1 True 1262 mRNA 0.41 6 12274686 12277084
XM_039806805.1 False 1238 mRNA 0.41 6 12274686 12277081

Neighbor

gene id symbol gene type direction distance location
LOC120562891 NA coding downstream 33596 12237418 ~ 12241090 (-)
LOC120562884 NA coding downstream 52508 12217613 ~ 12222178 (-)
cyth4b LOC103356696,LOC100708025,LOC101487734 coding downstream 79951 12175529 ~ 12194735 (-)
LOC120566952 LOC102289833,LOC101464297,LOC108231691 coding downstream 161408 11768031 ~ 12113278 (-)
zgc:92360 LOC103371798,LOC103383438,LOC100707756 coding downstream 552844 11697030 ~ 11721842 (-)
LOC120567055 NA coding upstream 23781 12300865 ~ 12303131 (-)
LOC120565820 cuta,LOC103356700,LOC102777976 coding upstream 43512 12320596 ~ 12328636 (-)
ift27 ift27,LOC102778458 coding upstream 162858 12439942 ~ 12453356 (-)
LOC120543530 tmprss6 coding upstream 411844 12688928 ~ 12703781 (-)
LOC120561143 NA coding upstream 427098 12704182 ~ 12720442 (-)
G3783 NA non-coding downstream 10680 12215455 ~ 12264006 (-)
G3781 NA non-coding downstream 18883 12207348 ~ 12255803 (-)
G3780 NA non-coding downstream 22846 12206851 ~ 12251840 (-)
G3747 NA non-coding downstream 100904 12171287 ~ 12173782 (-)
G3707 NA non-coding downstream 480022 11794446 ~ 11794664 (-)
G3821 NA non-coding upstream 151236 12428320 ~ 12428643 (-)
G3828 NA non-coding upstream 158468 12435552 ~ 12437402 (-)
G3847 NA non-coding upstream 189748 12466832 ~ 12496094 (-)
LOC120558164 NA non-coding upstream 236323 12513407 ~ 12515106 (-)
G3857 NA non-coding upstream 278863 12555947 ~ 12616154 (-)
nacc1b nacc1,LOC106946817,LOC106922850 other downstream 1281485 10966362 ~ 10993201 (-)
G3586 LOC104950333 other downstream 1369451 10899558 ~ 10905235 (-)
LOC120559237 LOC103359075 other downstream 2063382 9858080 ~ 10211304 (-)
G3373 LOC103359075 other downstream 2232682 9840590 ~ 10042004 (-)
LOC120559295 LOC102079284,LOC103374337,LOC105417663,LOC102799559,LOC102201385,LOC102294705,LOC101477163 other downstream 2706841 9525261 ~ 9567845 (-)
c1qtnf6b c1qtnf6,LOC103374348 other upstream 364929 12642013 ~ 12659983 (-)
LOC120561813 NA other upstream 527418 12804502 ~ 12832356 (-)
trnac-gca NA other upstream 583200 12860284 ~ 12860355 (-)
trnac-gca_1 NA other upstream 584610 12861694 ~ 12861765 (-)
trnac-gca_2 NA other upstream 585446 12862530 ~ 12862601 (-)

Expression


Co-expression Network