LOC120563293


Basic Information

Item Value
gene id LOC120563293
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7757686 ~ 7765391 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807384.1
TCCGCCGCTTGAAGTCATGATATATAAACTCAGATTTTTCAGTTTGAAGACACAGAGCTGCAAACGTCCATCAACAAAGAAAGGTTATCCTCTACTTGGAACAACATTTGAACCAAACCGTTGACATGAAGTTTGGGTTGCTGGTAGTATTGGCGGTGGCCGTTCTGGTGCCCAGCCTGTCCGAGGGCCGGACCATCTCCAGATGTGAGCTGAGAGAAAAGCTCGGGCAGGCAATCACGCTGCCCCCACAGCTTCAAAAGTTCAAGCAACAATACCTGGCAAGAGTTATCTGTGAGGTGAACAGCCAGTCCCGTCTCAACACCGGCCTGGTCAAGGTGTTCGGCAAACGCAGAACTGCAACCACAGCCACGCCAACTACTATGGTCAATGAAACGACCACTGAACCAACAACTATCCAACTGAATACCACCCAAACGACTACCACCCAACCAATCCCAACAGATGCCACAAATTCAACCCTAGTCATAAACAGAAGAAAGCGCCGGGCGCCTGACTCTGCTACTACAACCACAGCCAAGCCAACAACTCCGGTCAAAACACGACAGACTACCACCCACACAACTAAGAAGCCAACAACGCCGGTCAAAACACGACAGACTACCACCCACACAACTAAGAAGCCAACAACGCCGGTCAAAACACGACAGACTACCACCCACACAACTAAGAAGCCAACAACGCCGGTCAAAACACGACAGACTACCACCCACACAACTAAGAAGCCAACAACTCCAGTCAAAACACGACAGACTACCACCCACACATCTACCACCCAATCAACAACTAGAAAACTGAATACCACTGCTCCAACGACCACCAGACCAATCCCAACAGGTGCCACGAAATCAACCCTAGGCACAAATGAAACCAGAGCTGTCAACAACAGAAGAAAGCGCGAGGCAAGCAGCGAGGAACTGCTGAATGAAGATGAGCGATCCAGTGAGGACCAATCCAGTGAGGAGAGCGAGGAGTCGTCTTTCGGCCTTTACGGGCTCTTCCAGCTGTCTGACGAGACCTTCTGTAATTCTGGTTATCGCTCCTCCAAAAACAAGTGCAACACAACCTGCGATGCCTTCACTGATGACAACATTACGGACGACATTGATTGCTTTGTGAAGACTGATCAGTGGAGGTTGTTTTTAAATTCCGCCTCTCGCGAGTGCCAATATGGCGCCAAGAACTTCTTCGACCAATGTTAAAAAGAAGCTGACACGATTTCCACCTGCCTTTGATCCTCATGGTTTCATCTCAAACATTGTGGagcattttattatttcttcattttaatTAACCAATGAGATTTctttaataaagttattttgttTCAGTTCCTTTGTGGGTGAATTTGCCCCCAAAAATCACCAGAACTTGAAGTTGAACTGACAAATGTATTTTAGTAATTTTAATAGCTTTGATGATATTGTTTTACCACTttaatctacgttaaagtaagTTTAGTTTAcaaactaaaaataataataataaataaatattttttgcatATTCTGCTATCTGTGATTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807384.1 True 1544 mRNA 0.45 6 7757686 7765391

Neighbor

gene id symbol gene type direction distance location
LOC120563246 NA coding upstream 13692 7718956 ~ 7743994 (+)
LOC120570741 NA coding upstream 53855 7693585 ~ 7703831 (+)
pus10 pus10 coding upstream 117577 7612923 ~ 7640109 (+)
LOC120568176 NA coding upstream 320428 7390099 ~ 7437258 (+)
LOC120565053 NA coding upstream 518093 7238071 ~ 7239593 (+)
LOC120563312 NA coding downstream 12471 7777862 ~ 7784253 (+)
LOC120565219 NA coding downstream 35786 7801177 ~ 7803946 (+)
LOC120563316 NA coding downstream 45383 7810774 ~ 7817275 (+)
LOC120565228 NA coding downstream 62198 7827589 ~ 7833507 (+)
LOC120562006 NA coding downstream 100861 7866252 ~ 7873600 (+)
G2524 NA non-coding upstream 97591 7659400 ~ 7660095 (+)
G2523 NA non-coding upstream 98663 7658404 ~ 7659023 (+)
G2512 cct4,LOC102790717,LOC104959023 non-coding upstream 154095 7602033 ~ 7603591 (+)
G2505 fam161a,LOC102790424 non-coding upstream 166610 7588643 ~ 7591076 (+)
G2486 NA non-coding upstream 200245 7554040 ~ 7557441 (+)
LOC120563307 NA non-coding downstream 5322 7770713 ~ 7774926 (+)
G2545 ltv1 non-coding downstream 148361 7913752 ~ 7917581 (+)
G2561 NA non-coding downstream 197866 7963257 ~ 7965276 (+)
G2563 NA non-coding downstream 205398 7970789 ~ 7971223 (+)
G2562 taf5l non-coding downstream 208882 7974273 ~ 7975034 (+)
G2530 NA other upstream 58146 7699265 ~ 7699540 (+)
G1973 NA other upstream 1223316 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 1320469 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 1355046 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 1841312 5876547 ~ 5916374 (+)
G2557 NA other downstream 176156 7941547 ~ 7948253 (+)
G2590 NA other downstream 324422 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 636324 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 851992 8617383 ~ 8643702 (+)
abcc10 abcc10,LOC107102248 other downstream 904780 8670171 ~ 8702455 (+)

Expression


Co-expression Network