klf1 (LOC106569090,LOC105898955,LOC107700996,LOC107559026)


Basic Information

Item Value
gene id klf1
gene name LOC106569090,LOC105898955,LOC107700996,LOC107559026
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 35844287 ~ 35848461 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807596.1
AAAGAGAGATTTGAAGTTAGACTTGCAGCTGACAGAGATAgacaagagagaggagggagagaacagCAGGCAGCTTTAAGAACCTGTTTCTGCGGCCTTTTAGCACTGAGTGGACTGTAACTGGGATGAGTGGCCTGGTAAGCGGCGGTTAGCTGGTCATGTAAAgaataaaaagcaaaaaaaaaatactaaataaaagagaaactTTACTTTTGTTGCTACCACTGACAACTGCCGTTGTAGCAAAGTGCTTGATGGCTGTTACAAAGGCTGCGCTCCCTTCCTTCAGCTCCTTCTCCAACCTCGCTCAATCCAGTGACAATATGAAGGTGTGGAAGTCTGAGGGTGACTCTCTCCCTTTGGACTCTCTCAGCAACGAACTGTCACCAAGCAGCTCTGAGCAGCTGCAGGTCTCTAAAAAAACGACAGAGGAGCTCCTGGATGACGACAGCCAAGCATCCTGGGACATTGAGTTCCTGCTGTCTGATTGGAGCAGCCCATCGCCTGACCTTAACCCCTCTCAGGACAACAATGACCACCAGCTGCCACAGTTGGACCCAAACACAGCGTACCAAGAGGTGGCCCTGTTTAAGGACCAACCAGGACAGGAGCATCTGCAGATAAACACTGGCTGCCTCATGACAGAGCTCCTGTCCCCTGCTGAAACCACAACATCGGTCCAGCCGGAGCTGTACCACCATGGTTATATTGATGACCAAACAGGTCAGGTTTCCTTCTCCAGTCTACCTAAAGCAGATCACTTTGGGTTCACTCAGGGAGGCAGTGTGGAGAGGCACAGCAGGGGAAACCTCACTAAAGTCTCATCATGGGACTTTAATTCTTACTATTCCCAGCAACACCCCTCCATGGTGACCTACCCCGACAGCAGGTTCATACCACCTCAAGTCGTGACCCCTGACGCTCGACACTACAGCTACATGCCACACTTTCACCACAACGCCACCCTTTTCTGTGACTACACTCACAGCCAGGCCACCAGTCATCTGCCCCTTCACCAGCAGCCCCTGTTGGTTGGGCCTCAGCTGCCCCCTGGTGGGGTGGAGGGGAAGCGTGGTCGAAAGGCTCCAGGGAAAAAGAGGCCCGCCATCCACAGCTGTGAATACCCTGGCTGCAGCAAGACCTACACCAAGAGCTCACACCTCAAGGCTCACCTCCGCACCCACACAGGGGAAAAGCCTTACCAATGCTCATGGGAGGGCTGCAGCTGGAAATTTGCCCGCTCAGATGAGCTGACGCGTCACTACCGCAAGCACACGGGCCAAAAACCCTACGAGTGTCTGCTGTGTCAGAGGGCCTTCTCCCGCTCCGACCACCTGGCTCTGCACATGAAGAGACACACCTGACctgatacatacacacacacacacacacacacacaaatcactgCCATTTAAACAAAGATATTGAAAGGTAGAAGATTTGGATATTCTTTATAGTTTGAATTTATGACCCAAATCAGTACACTGAACATTTGGGACTCATAGGGACCTCAGATATTAACTGAACATCTTAACCAAAATTACCTTGAAATCTGCACTTGGTTATCTGGCTGGTTAAGAATACAATCTCACATGTAGACTAGACATGAGAACTCAACAAGTGGTAGAATGACATCACAAAACATTGTGTGCATGCTGCCTCGGGGGAGTTGTCCGTTTTTGGTTTACTTCAGAAGACAAATGAGACAAATTTAATTCAGAAGCCTTCGATATATGAAATACtttcatctttatttatttatttttttataaatgatttATATGCACGGCTTAAAGAGTCACCATCAGGTAATGACTGCTTAACCAATAACTTTTAAGAGTACTCCACTGATATAGCAATGCACTCCTATATTAACATTGTTggactaaaaaaaacaatataaaaatgggtgtggcagaaccagagatatcgTTGCACACAACGCAATTAGGCCATTAACAGTTCTGTTGAAGATTCGGGTGTGGCATGCTagtagcagctaatgtagctgCTAGCCTGAAGCAGAGATAAGGAGCGGGCTACAGAGTTCTGGTAggctcacttctttctaactccacacacccagatttctttcattttcaaacttgtattCTTCAAGTGACATCACCATCATCACAAAAGGCTTTAGactaaactttttaacaaacacacacaggacccGTACAAGAACACACTCATGTAAAGTTCGAATGCTTTCAGCAAAAAGGGCCACTTGGACAAAGACTATGCACGGTGGGCATGTAGCCAGCAAATATTAACACTAAAAATAAAGACCTACCAAAAAGTGTGTGTAATACGGGTTATAATACAATACACAGCAGTATGTCCTGTCGGAGCTCATGGCATGTCTGAATTCCCATTAGAACTTTAGTTTTTGTAATTGAATATtgtaatacaaataaataaaccataaaGTATATGTGGTGAGTATTCAGTAAATGCAGGTTTATGCATTTTTGTCACCTAactctgtttgtctttttggggtttttaatttaagaaaaacatATATGCTTTTGTCTCTTGCATCAAGCAGAatttaaaactgtaaataatCCAGCATCTTTCTCAGTTGTTTATCATTTAAACATGCAAGCAACATATTTATTAACATAATATTTTACATCAACAGAAGATACTATATTATTgtacagtgtttttttattctcaaaAGAGTGCTTTAAAGTCTTGTTTTTATTGTCATCATTCTAATAAAGACCTGTAATGCTGTAAAA

Function

NR:

description
PREDICTED: Krueppel-like factor 4

GO:

id name namespace
GO:0010628 positive regulation of gene expression biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0060319 primitive erythrocyte differentiation biological_process
GO:0043565 sequence-specific DNA binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807596.1 True 2756 mRNA 0.44 3 35844287 35848461

Neighbor

gene id symbol gene type direction distance location
LOC120563277 NA coding downstream 12988 35828755 ~ 35831299 (-)
nfil3-5 NA coding downstream 19119 35815772 ~ 35825168 (-)
LOC120564231 LOC103355955,LOC104967895 coding downstream 104617 35732968 ~ 35739670 (-)
LOC120555967 NA coding downstream 153259 35688489 ~ 35691028 (-)
prdx2 prdx2,LOC106526939 coding downstream 215395 35623904 ~ 35628892 (-)
LOC120566690 ddx17,LOC105012177 coding upstream 135785 35984246 ~ 35993088 (-)
LOC120566152 kiaa0430 coding upstream 173717 36022178 ~ 36041403 (-)
myh11a myh11 coding upstream 206453 36054914 ~ 36084518 (-)
cep20 fopnl coding upstream 239735 36088196 ~ 36091347 (-)
abcc6a LOC103355936,LOC100691027,LOC101464353 coding upstream 243472 36091933 ~ 36117858 (-)
G10174 NA non-coding downstream 1150 35799621 ~ 35843137 (-)
G10143 NA non-coding downstream 141695 35698632 ~ 35702592 (-)
G10091 NA non-coding downstream 192116 35651972 ~ 35652171 (-)
G10063 NA non-coding downstream 270843 35562913 ~ 35573444 (-)
G10061 NA non-coding downstream 286129 35557548 ~ 35558158 (-)
G10198 NA non-coding upstream 72394 35920855 ~ 35921076 (-)
G10200 NA non-coding upstream 80288 35928749 ~ 35929260 (-)
G10202 NA non-coding upstream 83138 35931599 ~ 35931855 (-)
G10349 NA non-coding upstream 313555 36162016 ~ 36166879 (-)
LOC120548049 NA non-coding upstream 433105 36281566 ~ 36284261 (-)
LOC120572869 NA other downstream 257674 35584470 ~ 35586613 (-)
rgs12b rgs12,LOC104946104 other downstream 393076 35404815 ~ 35451211 (-)
G9997 NA other downstream 443813 35398640 ~ 35400474 (-)
G9740 NA other downstream 1386652 34452850 ~ 34457635 (-)
stox2a stox2,LOC100702551,LOC102293991,LOC101478850,LOC102775740 other downstream 2318772 33497102 ~ 33525515 (-)
micall1a LOC100693188 other upstream 95587 35944048 ~ 35969266 (-)
slc5a10 slc5a10,LOC102791530,LOC103460715 other upstream 384746 36233207 ~ 36256880 (-)
LOC120547992 NA other upstream 428393 36276854 ~ 36280814 (-)
LOC120561459 LOC103359169,LOC107395760 other upstream 481320 36329781 ~ 36337148 (-)
LOC120560464 kcnq5,LOC100711684,LOC102297355 other upstream 675810 36524271 ~ 36718918 (-)

Expression


Co-expression Network