LOC120563650


Basic Information

Item Value
gene id LOC120563650
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5243915 ~ 5275696 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039807985.1
AGTGCAGTGCGCCCGGGCTTCAGCTGCAGACGGTCGGTGTTCTCTGGGCGGCTTGTGTCAGAGGAAATAAACGGCAAACACGGGACAATAGGAGACAAGCGCTGCCCGTGAAGGACCATATTCTGTCGGCACTTTGTGGACATTTTTCTGGGAAGAAAAGCTGTGCATGTCCCAGCTGGAGGAGCAGCTATAAAAACACGGACCGGAGGGTCGCACCGACTATCCCTGAGCCCCGCAGCCGCCAGGCAGCAACCCTCCGCCGGCATGACCCTCACGGGGGGCTCCgccctcctgctgctgctgctcaccgCCCGCATCCAGGTGTCTCCGGCGTCGGGGGACTTTGAGCTCCAGATCGTGTCGATGCAGAACGCCGCCGGGCGGCTGCAGACGGGCGCCTGCTGCGCGGGCGCGGACGCGGCGGGCGGCGGGCCGAAGCGGCGCTGCCCGGCGGCGGCCGATTGCTCCACGTACTTCCGGGCGTGTCGCGAGTTCCAGCTGAAGGTCTCCCCGGCCGGGCCCTGCAGCTACGGCAGCGCCGCTACCGTGCTGGGCGGGAACTCCTTCTCTCTGGGCGGCGCCGAGGCCGAGGACGCCGCACGCATCACACTGCCGTTCAGCTTCGCCTGGCCGAGATCGTACACGTTGATCGTGGAAGCCTTGGACTTCAACAATGACTCGTCCTCCGGCAGCAGCGCGGTGATAGAGAAGGCGGTGCTCTCGGGGATGATCAACCCGAGCCTCCAGTGGCAGAGTCTGGAGCACCGCGGCGCCGCCAGCTTCCACTTCCGGGTCCGGCTCCGCTGCCACGAGCACTACTACGGCTTCGGCTGCAACCGGTTCTGCCGGCCGCGGGACGACTTCTTCGGGCACTACGAGTGCGACCACAACGGCAACAAGACGTGCCTGGAGGGCTGGTCCGGGCCCGACTGCAGCACCGCGATCTGCAGACAGGGCTGCAGCTCTGAACACGGCTCCTGTAAAACTCCTGGAGAGTGCAAgtGTCTGTATGGCTGGCAGGGCGAGTACTGTGACCAGTGTATCCCTCACCCTGGCTGTGTCCACGGCAGCTGTGTGGAGCCCTGGCAGTGTCTCTGTGACACCAACTATGGAGGACAGCTGTGTGacaaagATCTGAACACGTGTCGGACGCTGCGACCGTGTTCGAACGGAGGAACGTGCAGCAACACGGGACCGGACAAATACCACTGCTCCTGTCCCGACGGCTACTCCGGGGCCACCTGCCAGAGAGctgAGCATGCCTGTCTGTCTAGCCCCTGTCTGAGTGGAGGAAGCTGCGTAGAAACCAGTCTGGGATTTGAGTGCCGCTGTGCTGCCGGCTGGACTGGACCCTCCTGCTCCATCAaTATAGATGAGTGTCTGGTGAACCCCTGCAGCCACGGAGGAAGCTGCCAGGATCTGGTGAACGGTTTCCGGTGTACGTGTCCTCCCCAGTGGACCGGAAAGACCTGCCTCATCGATGCCAACGAGTGTGACGACAGCCCCTGCCTCAACGCCAACTCCTGCCGCAATCTGATTGGAGGATACTTCTGCGAGTGCGTCCCAGGTTGGACGGGCCACAACTGTGACACCAATATCAACGACTGTCGCGGTCAGTGTCGGAACGGAGCCACGTGCAAGGACCTGGTGAACGGGTACGAGTGTGCGTGCGCTCCGGGTTTCGGCGGCGAGCGCTGCGAGGAAGACGTGGACGAGTGCGCCAGCGGGCCGTGCCTCAACGGCGGCCGTTGCCACGACGACGTGAACAGCTTCCACTGCCGGTGTCCGCCAGGCTTCTCCGGGAGCCGCTGTCAGttgGACATCGATTACTGCCTCCGCGGCCCGTGTCTGAACGGCGGCCGCTGTTTCAACCTGGCGTCCGAATACGCCTGCGAATGTCCCGAAGACTTCGAGGGCAAGAACTGCTCGCACCTGAAGGACCACTGCCGCAGCTCGCCATGCAAAGTGATGGACAGCTGCACCGTGGCGGTGGCGTCCAACAGCACGCCGGGCGGGATGCGTTTGATCTCGTCCAACGTGTGCGGCCCCCGCGGGCGCTGCCGGAGCCACGCCGGCGGGCAGTTCAGCTGCGAGTGTGACGAGGGATTCACCGGGACCTACTGCCACGAGAATGTAAACGACTGTGAGGGCGCCCCCTGTCTGAACGGAGGAACCTGTATAGATAAAGTCCGTCAGTACGAGTGTATCTGCGCCGACGGCTGGGACGGACCGACCTGCCACAATAACGTGGACGACTGCAGCTCGGCGCCCTGTCAGAACCGCGGCGTGTGTCGGGATCTGCTCAACGACTTCTACTGCCAGTGTAACGATGGCTGGAAGGGAAAGACCTGCCACtcaaGAGAGAGTCAGTGCGACGAGGCGACCTGCAACAACGGAGGAACCTGCTACGACGAAGGAGACGCCTTCAAGTGCCTGTGTGCCGCCGGCTGGGAGGGCGCCACCTGTAACATCGGGAGGAACAGCAGCTGTGTGCCGAGTCCCTGTGAGAACGGAGGAACCTGCGTGGCGGGCGGAGACTCGTTCAGCTGCGTCTGTAAGGACGGCTGGGAGGGCGCCACCTGCAGCCACAACACCAACGACTGCAGTCCTCATCCCTGctACAACAGCGGGACGTGTGTGGACGGAGACAACTGGTACCGCTGTGAATGTGCTCCGGGTTTCACCGGGCCAGACTGTAGGATCAACGTCAACGAGTGCCAGTCGTCTCCCTGCTCCTCCGGCTCCACCTGTCTGGACCAGATCAACTCCTACCACTGTGTCTGTCCCCCGGGAAGAACTGGCCCCCGCTGCCAGGAAGTGTCGGGGGGGCGGCCCTGCCTGGTGTCGGGGGGGCTCCTGGCTCAAGATGGAAGCAGATGGGACGACGACTGCAACACATGCCGCTGTCACAACGGGAGGATCAGCTGCACCAAggtactcggGGTGTGCGGCCCGGCGCCCTGCAGCCTCCACGGTGACCCCCCCCCCGGCCGTGTCCGGGCGGGTCAGAGCTGCGTTGCCGTGGGCGACGAGCGCTGCTTCGTGAAGCCCTGCGCGGGACGCGGCGAGTGCCGGGCCCCCGGCCAGCTTGCCCCGCCCACTGCCAGGTGTGTCTACGAGAACACCTGCGCCAACGTCACCTTCACCTTCAACAAGGACGTCATGGCAACGGGCGTGACGGTGGAGCAGGTTTGCCGAGAGCTGCGGCGCCTCTACGTGGTCACCGACCTGTCCTTGGACTCCGCCGTCTCCGTGAGCTGCGAGCTGGCGCTCGGCGCCAGCAACCAGATCCACGTGGCCATCGCGCCGGAGGACCAGCGGAGCGGGCTGGGCTTCGTCACGGAGATCACCGACCGGATCGTGGCCGTGGTCGGCAGGGGCAACGCCAACGGGTCCGTGGTCGGAGCCATCGCAGAGGTCCGGATCCAGAGACGCCAGAGCAGAGACCCCCGCGGTCAGCTCGTGTCGCTGCTGGTGTCCGTGGCGATCGTGGTCTGGGCGTTGGCGAGCGCCTCGGTGCTGCTGTGGTGCGTGCGGCGGAGACGGAGGAAGCAGAGCGCCCACGCCGGCGTCAGCACGCCGCCGGCCGGGGGTGCGGCGCCGCCGTGTCCGGCCCCCCCGGCCCCGGTCGCCGAGGGCAACAACAACGCCCTCTACATCAGGAACGCCATCGAGAAGAACCAGCGGCAGCGGTCCCTCCGCGCCGACAAGAACGCCGCCACCGCCGCCGGGAGCCAATCGGACGAGGGCGACTCGGACAAGCGGCCGCAGAGGGCGCCGCGGTGTCTCCGCGCGCCGCCGGAGTACTCGCTGGTCGACTGGGAGGAGCGAGCCGCCCGGCGTACGGCGGCGCCGCACTGGACGGGCAAACGGGACAACCGGCGGCTGCAGCCCCAGAGCCTGACCAGGCCGGAGGACATCGTGTAGCCGCTCGCCACTCGCCGCGTTTAAAGCGACCGTAACGTGAAGCAGGATCGGCGAGTTCCCGGCGCTGTGTGCACCGCTGCTCTGAAGCCTCGAGCGTGTCGATGCGACCGTCTCCGTCTTTCTAAACCGGATGTGGTGAAAAaggttattttttggggggcatttttaggcctttactgaccggacagctgaagacacgaaaggggagagagacgtTAGCTTAGCGTTAGCTTAGCGTTAGCTTAGCGTTAGCTTAGCGGTAGCCTGCAGCGGCTCATTTCCAGACACCGTGGCAACCGCCGGAGTCAGAGATGAGCGGAGAAACTGcagaactgtaaaaaaaatcctCCCGCTTCCCCCGAAGTCACCGAGTGACAAACAACAACCGGTGAAGCACGCGGACTCCCAACGGGGACTCCACGGTGCGTTCACGTGCACCTCGTAAACTCCGTGAAACTCAAACTCGTCGTTGCCGAGTAACGCTTCTGTCGTCCCTGTtggaaaactgaaaaaaatgaactgaatggatggatgaactgagggatttggagaatcgtgccactccagttttttttgtcttttaagttCTTCTTTTGTTCAAGATGGATTCTTGCTGTTTTTAATTTATGGCGCCGTGTCCGAATGCTGCGCTGCGATTGGCTGGATCTGGACGTGAATGAGCGTTTTCCCAAAAGACTTTCACGCAGACTTTGTATCTCTattttttgggccatttttaggcctttattttgacaggacagatgacatgaaagaggagagagaggggggggatgacatgcagcaaagggctgcaggtcggagttgaacctgaGGCCGCtacgtcaaggagtaaacctctacatatgggcgcacgctctaccaactgagccaccCGGGCGCCCAGATTTTGTATCTTTCGATTCGAGAAtaagttttttattattattataatttatttaattacagGGACAGTgtatattaataaacatttctgtcaatatgCCAGCGTTAGCcagaaggctatttttcatctgaaGTCCCTAGAAAGATGGTAAAACAAAAAGTCACCCTAAAAGAAGGTAAAattacacatttacataacagtataacatttaaaatacatttggtaAAAAGTACTATTAAGCTAAAAATGTCCAATAGGAGCACAGCAGACCACATTCAGACAAACATCAGACAAAGacatgaacatacagtacaggtcaaaagtttggacacaccttctcattcaatgtgtttcctttttattttcatgactat

Function

GO:

id name namespace
GO:0007154 cell communication biological_process
GO:0016020 membrane cellular_component
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039807985.1 True 5205 mRNA 0.61 27 5243915 5275696

Neighbor

gene id symbol gene type direction distance location
LOC120563200 LOC103374761 coding downstream 177725 5037606 ~ 5066190 (-)
LOC120563519 LOC103374759 coding downstream 393341 4827103 ~ 4850574 (-)
LOC120563156 NA coding downstream 450872 4785365 ~ 4793043 (-)
LOC120563484 NA coding downstream 482458 4695160 ~ 4761457 (-)
LOC120563637 NA coding downstream 536406 4702039 ~ 4707509 (-)
LOC120563624 NA coding upstream 125865 5401561 ~ 5407181 (-)
LOC120563585 NA coding upstream 194367 5470063 ~ 5471326 (-)
LOC120563643 NA coding upstream 195750 5471446 ~ 5472005 (-)
kif16ba kif16b coding upstream 537669 5813365 ~ 5874875 (-)
LOC120563808 NA coding upstream 611773 5887469 ~ 5892793 (-)
LOC120563682 NA non-coding downstream 43087 5200207 ~ 5200828 (-)
G1723 NA non-coding downstream 147291 5075968 ~ 5096624 (-)
G1705 NA non-coding downstream 207390 5034505 ~ 5036525 (-)
G1664 NA non-coding downstream 417733 4821726 ~ 4826182 (-)
G1675 NA non-coding downstream 428269 4807904 ~ 4815646 (-)
G2009 NA non-coding upstream 44371 5320067 ~ 5346322 (-)
G2022 NA non-coding upstream 64838 5340534 ~ 5341507 (-)
G2034 NA non-coding upstream 99796 5375492 ~ 5377786 (-)
G2047 NA non-coding upstream 139640 5415336 ~ 5415888 (-)
G2056 NA non-coding upstream 183085 5458781 ~ 5459073 (-)
LOC120563591 LOC107656489 other downstream 93496 5148516 ~ 5150419 (-)
LOC120564103 NA other downstream 108610 5114020 ~ 5135305 (-)
G1726 NA other downstream 146281 5097369 ~ 5097634 (-)
G1722 hnrnpll,LOC108249392,LOC104956991,LOC106530872,LOC103368822 other downstream 158397 5076606 ~ 5085518 (-)
G1623 NA other downstream 455338 4641586 ~ 4788577 (-)
LOC120563672 esf1,LOC108229506 other upstream 200849 5476545 ~ 5499993 (-)
LOC120563692 NA other upstream 455743 5731439 ~ 5736986 (-)
G2146 NA other upstream 835443 6111139 ~ 6111592 (-)
LOC120563747 LOC104946033 other upstream 925251 6200947 ~ 6206890 (-)
G2177 NA other upstream 990910 6266606 ~ 6267238 (-)

Expression


Co-expression Network