LOC120563798


Basic Information

Item Value
gene id LOC120563798
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5939846 ~ 5944002 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808209.1
CCAGAGCTGCAGTAAGAGGAGGAGCAACACTGGAAAGAGGAGAGCTTCAACGTCCCACTCCAGAAATGAAAGTTAAGTTTGTCAGAGTGTCAGCCACGCTGCAGTCGAGAcaagtctctgtttctctctgacagaaaactcaaactgacttcatcaggtctttctcaacaacacagcagagtctctgccaaacactgATATGGCTGCTGCAAACTATCTGCCATCTGAAGATCAGTTTTtgtgctccatctgtctggatgtgttcactgatccTGTCACCACATCATGTGGACACAACTTCTGCAAAAACTGCATCAATGAACACTGGAATACTAATGACCAGTACCTGTGTCCGATGTGTAAAAAGGTTTTCAACACAAAACCTGAGCTGCTCATCAACACTTTGCTTTCTGAGATGGTCGTTCAGTTCAGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtctccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggCCTCCTACTGTGAGACTCCCCTGGAGTCTCATCTGAGAGCTTTACGTCTGAAAAGAAATAATCTGATCGACCCTGTGGAGAACCTGGAAGGCAAGATGTGTACGAAGCACAATAAACCTCTGGATCTCTTCTGTAAGACTGACcagacatgtgtctgcatgctctgcCATGTTTCACACCACAAGAGGCATGATGTTGTTCCTCTGAAAGAAGAATATGAAGGAAAGAAGGTCGAGCTGGGGAAGACAGGGGCTGAAATTCAGCAGATGATCCGGAAGAGACGACTGAAGATTCAAGAGATCAAACACTCAGTCGAcctcagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttctctgaaggagtctgttgagagaggcctgaatgagctcatcaacaagatcaaagagaagcagaaaacaacagaaaaacaggccgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagGTGTTACGCTCTGAAGaccacctccatcttctccagagtGTCCAGTCCCTAAAACCCAAGCACACTCTACCCACCAAGGACTGGACAGAGGTCAGTGTCAATCCATCATATGAGGGGACTGTGGTGAAAGCTGTGGCTCAGCTGGAGGAGACGCTCAGTAAAAAGATGAAGACGCTGCTTGAAGctgagctgaagagggtccagcagtatgcagtggatgtgactcttGATCCTGGTACAGCACATCCTAAAATCATCCTGTCTGATAATGGGAAACAAGTGAATCTTGGTGATGTGAAGAAGAATCTCCCAGACAAACCAGAGAGATTTTTTGATTGTGCTTGTGTTTTAGGAAAACAGAGTTTCTCTTCAGGCAGATTTTATTTTGAGGTTCAAGTTAAAGGAAAGACTCATTGGTTTTTAGGAGTGGCCAGGGAGTCGGTCAACAGGAAGGGACAAATCACACTGAGACCTCAGAAAGGTTTCTGGACTATATGGTTGAGAAATGGAATTGAGTACCAAGCTCTTGATGACCCTCcagtccttctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgacGTAGATGCTGCAGCTCGCATCTACTACTTTACTAgctgctccttcactgagaaactcttcccATTCTTCAGTCCGAGTAATAATTGTGGTGGTAAAAACTCTCCccctctgatcatctctcctgtcagagTCACCAAGTCTCACGTCCGTTCGTGATGGCATTatgaaattaaatctattagaatgTGTTACCATTACGTAATTGTGAAGATTTATGTGTTGGGGTCAcgtaggcctgtcgcgatagtcaataaatcgagttatcacatgataagaaaaaatgata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808209.1 True 1991 mRNA 0.46 2 5939846 5944002

Neighbor

gene id symbol gene type direction distance location
LOC120564640 NA coding downstream 34215 5899556 ~ 5905631 (-)
LOC120563808 NA coding downstream 47053 5887469 ~ 5892793 (-)
kif16ba kif16b coding downstream 64971 5813365 ~ 5874875 (-)
LOC120563643 NA coding downstream 467841 5471446 ~ 5472005 (-)
LOC120563585 NA coding downstream 468520 5470063 ~ 5471326 (-)
LOC120563920 NA coding upstream 15325 5959327 ~ 5964163 (-)
LOC120563835 NA coding upstream 25938 5969940 ~ 5972824 (-)
LOC120563822 NA coding upstream 38141 5982143 ~ 6001326 (-)
LOC120563758 NA coding upstream 52356 5996358 ~ 6001336 (-)
LOC120563765 LOC104946033 coding upstream 64095 6008097 ~ 6032484 (-)
G2126 NA non-coding downstream 27583 5911178 ~ 5912263 (-)
G2118 NA non-coding downstream 69843 5869701 ~ 5870003 (-)
G2105 NA non-coding downstream 131997 5802850 ~ 5807849 (-)
LOC120563981 NA non-coding downstream 144082 5793615 ~ 5795764 (-)
G2076 NA non-coding downstream 247371 5689963 ~ 5692475 (-)
G2137 NA non-coding upstream 118218 6062220 ~ 6063639 (-)
G2142 NA non-coding upstream 136653 6080655 ~ 6081592 (-)
G2147 NA non-coding upstream 172495 6116497 ~ 6158715 (-)
G2152 NA non-coding upstream 192325 6136327 ~ 6238233 (-)
G2158 NA non-coding upstream 215152 6159154 ~ 6159731 (-)
LOC120563692 NA other downstream 202860 5731439 ~ 5736986 (-)
LOC120563672 esf1,LOC108229506 other downstream 439853 5476545 ~ 5499993 (-)
G2010 NA other downstream 586694 5231497 ~ 5353152 (-)
LOC120563591 LOC107656489 other downstream 789427 5148516 ~ 5150419 (-)
LOC120564103 NA other downstream 804541 5114020 ~ 5135305 (-)
G2146 NA other upstream 167137 6111139 ~ 6111592 (-)
LOC120563747 LOC104946033 other upstream 256945 6200947 ~ 6206890 (-)
G2177 NA other upstream 322604 6266606 ~ 6267238 (-)
G2219 NA other upstream 577504 6521506 ~ 6534443 (-)
spred2a spred2 other upstream 596640 6540642 ~ 6581598 (-)

Expression


Co-expression Network