LOC120563808


Basic Information

Item Value
gene id LOC120563808
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5887469 ~ 5892793 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808219.1
tcctaagtggaatgcagccatcattactgggttttgaatacacctgtgcttttccttctatgacatgtcaagatgtctgccgtgaaaaaggccCATAAAGATATAAGCAACACCTTCTCACACACCTTCCTCCTCCCACCTGTTAGATAAAACTCCATCTTTGCTCCATATTAACCAGACAGCACACCTGTGTAACCGTGTAAATCAGAGGGAGGAAACCTAACACCAGAGCTGCAGTAAGAGGAGGAGCAACACTGGAAAGAGGAGAGCTTCAACATCACACTCCAGAAATGAAAGTTAAGTTTGTCAGAGTGTCAGCCACGCTGCAGTCGAGACAAGTCTCGGTTTCTCTCtgaaagaaaactcaaactgacttcatcaggtctttctcaacaacacagcagagtctctgccaaacactgATATGGCTGCTGCAAACTATCTGCCATctgaagatcagtttctgtgctccatctgtctggatgtgttcactgatccTGTCACCACATCATGTGGACACAACTTCTGCAAGAACTGCATCAATGAACACTGGAATACTAATGACCAGTACCTGTGTCCGATGTGTAAAAAGGTTTTCAACACAAAACCTGAGCTGCTCATCAACACATTGTTCTCTGAGATGGTTGCTCAGTTCAGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgatgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtcTCCTACTGTGAGACTCACCTGGAGTCTCATCTGACAACGGCAGGtctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAAGGCAGGATGTGTACAAAGCATGATAAAcctctggagctgttctgtaagaccgaccagacatgtgtctgcatgctctgcACTGTTTTAGACCACAAGATGCATGATGTTGTTCCTCTGAAAGAAGAATATGAAAGAAAGAAGGCAGAGCTGGGGAAGACAGAGGCTGAAATTCagcagatgatccagaagagacgactgaagattcaggagatcaaacactcagtcgacctcagtgaggaagatgcagacagagagacagcagaaggtgttcaggtcttcacttctctgaaggagtctgttgagagaggcctgaatgagctcatcaacacgatcaaagagaagcagaaaacaacagaaaaacaggccgaagctttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagctctcacgctctgaagaccacctccatcttctccagagtgtccagtccctaaacatccaacaacctccaccaaccaaggactggacagaggtcagcatccatccatcatcataTGAGGGGACTGTGGTGAAAGCTGTGGCACAGCTGGATGAGACACTCAGTGaagagatgaagaagctgcttgctaagtctgagctgaagagggtccagcagtatgcagtggatgtgactcttgatcctgatacagcacatcctcaactcatcctgtctgatgatGGGAAACAAGTGAATCTTGGTGATGTGAGGAAGAATCTCCCAGACAACCCGGAGAGATTTTCTAATTGTGCTTGTGTTTTAGGAAAGCAGAGTTTCTCTTCAGGCAGATTTTACTTTGAGGTTCAAGTTAAAGGAAAGACTAAATGGGCTTTAGGAGTGGCCAGAGAGTCAATCAACAGGAAAGAGAACATCCCGCTGATCCCTCAGAATGGTGTATGGACTTTATATTTGACAAATGGAAATGTGTACATAGCTGCTGCTAAACCTTcagtccttctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgatgtagatgctgcagctcttatctactcctttactggctgctccttcactgagaaacttTTCCCATACTTCTGTCCCTGTAGTAATGATGGTGGTAAAAACTCTGCccctctgatcatctctcctgtcagagtaaactaatcacttaactttgattcatttattttcattcaggGAAACAAATGTTTGCCAATCATGTAACCagagatcagacttgtcagaGTGTTTgaaggcggtgtgagagtccagTACACGAAacgggaaacatcactgcctctatctctgccacgAGAACGTTTTAAAGccccaaacacaagctctgaactgcccgggagtttggggaacagctgactgtttcctcaGTCCCTCCGTCAGTCCCTCGAATGTTTCCttcaacaacaaagcactcgctATATCTCgctcatctcttttctttctctctttctccgggaaataaagctgccttcaagttcAGTCGGAAATGTcgagatctataaacgatctgacagaaaacagtgtgaaatataaagtgtacttgtgctacattgggaaGTCACACAAATAGGCTGTTTCAGTGACACTCCCACCGCTGCACAACCCTGCCAAAAATCTGTGCATCACTTTCTTTGGTCTGAACGCAGCTTAAGGCCTGTTACATGTCTATAGTTGTCTACAGAACACAGTGTGAATATATGTCGTTATCATACCATGTATAAAAGGTTAATGAATGTTTATTTTGTATGAAAAGTGTTTTAGTTCATTATTAGTCACTTcgtttattttttgtcttttgtgggTAAGATTGGTTTATAAGTCAAAGAAATCCTTATGtgattataaaaagaaaaactgtaaaataaaccaGATGTTGAACACAAGGCCTGAGTAAA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808219.1 True 2823 mRNA 0.45 2 5887469 5892793

Neighbor

gene id symbol gene type direction distance location
kif16ba kif16b coding downstream 12594 5813365 ~ 5874875 (-)
LOC120563643 NA coding downstream 415464 5471446 ~ 5472005 (-)
LOC120563585 NA coding downstream 416143 5470063 ~ 5471326 (-)
LOC120563624 NA coding downstream 480288 5401561 ~ 5407181 (-)
LOC120563650 NA coding downstream 611773 5243915 ~ 5275696 (-)
LOC120564640 NA coding upstream 6763 5899556 ~ 5905631 (-)
LOC120563798 NA coding upstream 47053 5939846 ~ 5944002 (-)
LOC120563920 NA coding upstream 66534 5959327 ~ 5964163 (-)
LOC120563835 NA coding upstream 77147 5969940 ~ 5972824 (-)
LOC120563822 NA coding upstream 89350 5982143 ~ 6001326 (-)
G2118 NA non-coding downstream 17466 5869701 ~ 5870003 (-)
G2105 NA non-coding downstream 79620 5802850 ~ 5807849 (-)
LOC120563981 NA non-coding downstream 91705 5793615 ~ 5795764 (-)
G2076 NA non-coding downstream 194994 5689963 ~ 5692475 (-)
G2070 NA non-coding downstream 262984 5575852 ~ 5624485 (-)
G2126 NA non-coding upstream 18385 5911178 ~ 5912263 (-)
G2137 NA non-coding upstream 169427 6062220 ~ 6063639 (-)
G2142 NA non-coding upstream 187862 6080655 ~ 6081592 (-)
G2147 NA non-coding upstream 223704 6116497 ~ 6158715 (-)
G2152 NA non-coding upstream 243534 6136327 ~ 6238233 (-)
LOC120563692 NA other downstream 150483 5731439 ~ 5736986 (-)
LOC120563672 esf1,LOC108229506 other downstream 387476 5476545 ~ 5499993 (-)
G2010 NA other downstream 534317 5231497 ~ 5353152 (-)
LOC120563591 LOC107656489 other downstream 737050 5148516 ~ 5150419 (-)
LOC120564103 NA other downstream 752164 5114020 ~ 5135305 (-)
G2146 NA other upstream 218346 6111139 ~ 6111592 (-)
LOC120563747 LOC104946033 other upstream 308154 6200947 ~ 6206890 (-)
G2177 NA other upstream 373813 6266606 ~ 6267238 (-)
G2219 NA other upstream 628713 6521506 ~ 6534443 (-)
spred2a spred2 other upstream 647849 6540642 ~ 6581598 (-)

Expression


Co-expression Network