LOC120563814


Basic Information

Item Value
gene id LOC120563814
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6029055 ~ 6032497 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808229.1
AGAGTGTCAGCCACGCTGCAGTCGAGACAAGTCTCGGTTTCTCTCtgaaagaaaactcaaactgacttcatcaggtctttctcaacaacacagcagagtctctgccaaacactgATATGGCTGCTGCAAACTATCTGCAATCTGAAGATAagtttctgtgctccatctgtctggatgtgttcactgatccTGTCACCATACTATGTGGTCACAACTTCTGCAAGAACTGCATCAATGAACACTGGAATACTAATGACCAGTACCTGTGTCCGATGTGTAACAAGGTTTTCAACACAAAACCTGAGCTGCACGTCAACACTTTGCTTTCTGAGATGGTTGCTCAGTTCAGACAGTCAGCTCAacagaaagccagcagcagcagctcagagcaacaagtgtccaaaccaggagaagttccctgtgacgtctgcactggaaccaaactgaaggccctgaagtcctgcctggtgtgtctggtcTCCTACTGTGAGACTCACCTGGAGTCTCATCTGACAACGGCAGGtctgaaaagacatcagctgatcgACCCTGTGGAGAACCTGGAAGGCAGGATGTGTACGAAGCACGATAAAcctctggagctgttctgtaagactgaccagacatgtgtctgcatgctctgcACTGTTTTAGACCACAAGATGCATGATGTTGTTCCTCTGAAAGAAGAATATGAAGGAAAGAAGGCCAAGCTGGGGAAGACAGAGGCTGAAATTCtgcagatgatccagaagagacgaCTGAAGATTCAGGAGATCAAACACTCAGTCGACCTTagtgaggaagatgcagacagagagatagcagaaggtgttcaggtcttcacttctctgaaggagtctgttgagagaggcctgaatgagctcatcaacacgatcaaagagaagcagaaaacaacagaaaaacaggccgaaactttcatcaaagagctggaacaggaaatctctgagctgatgaagagaagcactgaggtggagcagctctcacgctctgaagaccacctccatcttctccagagtGTCCAGTCCCTTAACACCAACCACCCTACACCCACCAAGGACTGGACAGAGGTCAACGTCTGTCCATCATATGAGGGGACTGTGGTGAAAGCTGTGGCtcagctggaggagacactCAGTGAAGAGAGGAAGAAGCTGCTCGCTGAGTCCGAGCTGAAGAGGGTccagcagtatgcagtggatgtgactcttGATGCTGATACAGCATATCCTCAACTCATCCTGTCTAATGATGGGAAACAAGTATGTGTTGGTGATGTGAGGAAGAATCTCCCAAACAACCTAAAGAGATTTTCTAAGTGTGCTTGTGTTTTGGGAAACCAGAGTTTATCTTCAGGCAGATTTTACTTTGAGGTTCAAGTTAAAGGAAAGACTAGATGGGATTTAGGAGTGGCCAGAGAGTCGATCAACAGGAAGGGACAAATCAAACTAAGTCCTGAGGATGGTTTCTGGACTATAGTGTTGAGAAATGGAAATGAGTACAAAGCTCTAGCTGGCCCTTcagtccttctctctctgaagtctcctcctcagaaggtgggggtgtttgtggattatgaggagggtctggtctccttttatgacgtagatgctgcagctcttatctactcctttactggctgctccttcactgagaaactcttcccATACTTCAGTCCCAGTATTAATGATGGTGGTAAAAACTCTGCCTctctgatcatctctcctgtcagagtaaactaatcacttaactttgatttattttcattcaggGAAACAAATGTTAATAATTAGTTTAGatcttattttctatctttttaatgtGGTTAATTGTTTACACTTAATTCttaagatttgttttaattacatGTATTCCATTACATAGTCAACAAATTAATTTAATGCATTCATCTTTTCAACACTGCACcagaatatcttttttttaaaacccctGTTAAAtccacagacatttattttaacttccAGAAGAAATCAGTTTCAAAAGACACCTTCATTTAAGAGTAAGTCTGCATTCACATAAAACGCAGCAGGCCTGCAGTGAAAATTTTGAGACAgtctcaacttttggagaaacggtAACCCTGCGTCATGCTGCGGTGGCCCAACCCGATCTCactcaaaagcgtacaaataacacgggtttctaccgtgcaatgtgtacgagaaagtgaaattctacgtgcattacatacgcggagcgctccaattgaagt

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808229.1 True 2254 mRNA 0.44 2 6029055 6032497

Neighbor

gene id symbol gene type direction distance location
LOC120563758 NA coding downstream 27719 5996358 ~ 6001336 (-)
LOC120563822 NA coding downstream 27729 5982143 ~ 6001326 (-)
LOC120563835 NA coding downstream 56231 5969940 ~ 5972824 (-)
LOC120563920 NA coding downstream 64892 5959327 ~ 5964163 (-)
LOC120563798 NA coding downstream 85053 5939846 ~ 5944002 (-)
LOC120563841 NA coding upstream 9729 6042226 ~ 6048389 (-)
aplf NA coding upstream 32695 6065192 ~ 6119534 (-)
LOC120563858 NA coding upstream 151338 6183835 ~ 6198235 (-)
LOC120563881 NA coding upstream 176281 6208778 ~ 6213600 (-)
LOC120563932 NA coding upstream 181170 6213667 ~ 6216481 (-)
G2122 NA non-coding downstream 5642 5881917 ~ 6023413 (-)
G2126 NA non-coding downstream 116792 5911178 ~ 5912263 (-)
G2118 NA non-coding downstream 159052 5869701 ~ 5870003 (-)
G2105 NA non-coding downstream 221206 5802850 ~ 5807849 (-)
LOC120563981 NA non-coding downstream 233291 5793615 ~ 5795764 (-)
G2137 NA non-coding upstream 29723 6062220 ~ 6063639 (-)
G2142 NA non-coding upstream 48158 6080655 ~ 6081592 (-)
G2147 NA non-coding upstream 84000 6116497 ~ 6158715 (-)
G2152 NA non-coding upstream 103830 6136327 ~ 6238233 (-)
G2158 NA non-coding upstream 126657 6159154 ~ 6159731 (-)
LOC120563692 NA other downstream 292069 5731439 ~ 5736986 (-)
LOC120563672 esf1,LOC108229506 other downstream 529062 5476545 ~ 5499993 (-)
G2010 NA other downstream 675903 5231497 ~ 5353152 (-)
LOC120563591 LOC107656489 other downstream 878636 5148516 ~ 5150419 (-)
LOC120564103 NA other downstream 893750 5114020 ~ 5135305 (-)
G2146 NA other upstream 78642 6111139 ~ 6111592 (-)
LOC120563747 LOC104946033 other upstream 168450 6200947 ~ 6206890 (-)
G2177 NA other upstream 234109 6266606 ~ 6267238 (-)
G2219 NA other upstream 489009 6521506 ~ 6534443 (-)
spred2a spred2 other upstream 508145 6540642 ~ 6581598 (-)

Expression


Co-expression Network