prokr1a (LOC103383410,LOC101078632)


Basic Information

Item Value
gene id prokr1a
gene name LOC103383410,LOC101078632
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 6039211 ~ 6058589 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808449.1
AGTCGGTGGATCAGCGCGCGTGAAGGATCAGCTTCAGACTCCTGAACATGTTGACCTGATCCAGAATGGACGCCCCGACCAACAGCAGCTTGGCTCTGCCAGACTACTTCCTCGCCAGTGACGGTCTGGACTACGAGATTCCCGTGGACGAGATCCCTGACACCACGCAGGGCCGGGCCTTCTTCGCGGCCACCATTGTCATCGCCTTGGTCCTGGTGGTCATCATGTTGGTCTGCGGAGTGGGAAACTGTCTGTTCATCGCCAGCCTCGCTCGCTACAAGCAGCTGCGCAACCTGACCAACCTGCTGATCGCCAACCTGGCCGTGTCCGACGTGCTGGTGGCGGCCGTGTGCTGCCCGTTCCTGATGGACTACTACGTGGTGAAGCAGCTGTCGTGGGATCACGGCTTGCTGCTCTGCGCCGCCACCAACTACCTTCGCACCGTCTCTCTCTACGTGTCCACCAACGCGCTGCTCGCCATCGCCGTGGACAGGTACATGGCGATCCTCTACCCTCTGAAGCCTCGTATGAAGTTCCAGACGGCGTACTGCGTGACCCTGGCGGTCTGGATCGTCCCCGTCTTCATCTCCATCCCGTCTGCCTACATGGCGTCCGAGATGACGTACCCGCCGCACGTGGAGGGCCGCCCCCACAAGACCTTCTGCGCTCAGATCTGGCCGGTGGACCAGCAGGTTTACTACCGCTCCTACTTCCTGCTCATCTTCGCTCTGGAGTTCGTGGGCCCCGTGACCGTCATGGCCGTCTGCTACGTCCAGATCTCCAGGGAGCTGTGGTTCAAAGACGTCCCGGGTTTCCAGACGGAGCAGATCCGGGCGAGGCTCCAGAGGCGTCGGAGGACGGTGATCGTGCTGATCCTGGTGCTGGTGGCCTACGTGCTGTGCTGGGCGCCGTACTACGCTTTCGCCCTGCTGCGGGACTTCTACCCAACGCTCATCTCCAGGGACAGGAACTCCCTGGTGGTCTTCTACATCATCGAGTGCGTAGCCATGAGCAACGGGGTCATCAACACCCTCTGCTTCATGAGCGTCCGAAGCAACACCAAGCGCATGAAGAAGCCGGGCAAGTTTCTGCTGAGGCTGGTGACTTTCGTGGCCTCCAAGTCAGTGGACGACGGGGAGGCGCGGACCTCGTCTCTCCGAGTGACCGAGGACACACAGGGAGCTCGGCTACGGTAGAAAGGTCAAACGATCTGATGGTTCAACCAGCACGCCGGATTAGAGCTGTTATCAggccttaaaagttaggcccgagcccgacaggattcggcccgagcccgacaagtacatt

Function

NR:

description
PREDICTED: prokineticin receptor 1-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808449.1 True 1308 mRNA 0.61 3 6039211 6058589

Neighbor

gene id symbol gene type direction distance location
LOC120563910 NA coding upstream 235977 5790297 ~ 5803234 (+)
LOC120564476 NA coding upstream 431410 5606454 ~ 5607801 (+)
LOC120564466 NA coding upstream 448203 5589669 ~ 5591008 (+)
ndufaf5 ndufaf5 coding upstream 521103 5501032 ~ 5518108 (+)
btbd3a LOC103354797,LOC102313104,LOC101466369,LOC100710091,LOC102793615,LOC104954790 coding upstream 667441 5361351 ~ 5371770 (+)
LOC120563871 NA coding downstream 30263 6088852 ~ 6093727 (+)
LOC120563868 NA coding downstream 46556 6105145 ~ 6109440 (+)
LOC120563973 NA coding downstream 61805 6120394 ~ 6127443 (+)
LOC120563935 NA coding downstream 74046 6132635 ~ 6146027 (+)
cnrip1a cnrip1,LOC102194292,LOC107094923,LOC101465016,LOC100711692,LOC106535151,LOC104918542 coding downstream 89791 6148380 ~ 6157391 (+)
G1825 NA non-coding upstream 8018 5982165 ~ 6031193 (+)
G1831 LOC103463036 non-coding upstream 17191 6004393 ~ 6022020 (+)
G1840 NA non-coding upstream 22570 5960215 ~ 6016641 (+)
G1833 LOC104946033 non-coding upstream 55143 5971225 ~ 5984068 (+)
G1873 NA non-coding upstream 79110 5897705 ~ 5960101 (+)
G1900 NA non-coding downstream 3539 6062128 ~ 6063637 (+)
G1898 NA non-coding downstream 52625 6111214 ~ 6111601 (+)
G1905 NA non-coding downstream 60458 6119047 ~ 6119529 (+)
G1906 NA non-coding downstream 66778 6125367 ~ 6126533 (+)
G1826 NA non-coding downstream 150166 6208755 ~ 6217056 (+)
snrpb2 snrpb2 other upstream 122837 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 567802 5387393 ~ 5471409 (+)
G1775 NA other upstream 664304 5372617 ~ 5374907 (+)
LOC120563544 LOC100708833,LOC102313704,LOC101466655,LOC102192550 other upstream 711294 5235346 ~ 5327917 (+)
G1756 NA other upstream 816467 5218068 ~ 5222744 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 327012 6385601 ~ 6402640 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other downstream 348811 6407400 ~ 6437217 (+)
G1973 NA other downstream 473852 6532441 ~ 6534370 (+)
G2530 NA other downstream 1640676 7699265 ~ 7699540 (+)
G2557 NA other downstream 1882958 7941547 ~ 7948253 (+)

Expression


Co-expression Network