LOC120564208


Basic Information

Item Value
gene id LOC120564208
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 20182899 ~ 20186395 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809036.1
ATcaatattaaaagaaatgtgcatatttaaattaatttataaacTGACACTATGACAATGACAAAAATATTTCCTTTATTTCCACTTGTAGCTCTGAGTATTGTGGAGATGAAGCCTCTCATCATTGGTGGCCGTGTTGGGGAAAATGTGACATTCAGATGCTCAGAGTGGAATACTTGGATGAATGTAGAATCTAATGATAAATACTTTTGTAATAGTCCATGCACAGAAGACAAACACATTATCATCAAAGCAGCATTTGGAGAGactaaacataaaaacagaataaagttGACTAACAGAGCAAAAGGTTTAGTTGTAACCTTCAGTAATCTCCAAAAGTCAGACTCTAAGACATATTATTGTGGAGTGGTGAGATTTGCCCGTGATTCATTTATAATGGTGAATCTTAAAGTTACAGATGCTGAGTCTTCAAGTCCCAAGACAACCCCTGAAACAGTCATTGATGGTTCTACTCCCTCATTTGCTGTATCAAACAGCTCCCATGAGTCTTTAAGCAGCTCAGAAATGATAACTGATATGGCTAGATCATACATGACAACAACACCTACTGCATCAGCAACACAAGGAGCCGGAAGTGTACCATATTTGATCATAGGTGTCATTGTCATAATAACCATACTGATGGTCTTACTGAAGCTTATGAGGAAGATGAGAATGAAACAACTGAAATTTGTGTCAAGTGCTGATACACCAAAGGAAGACGTACCAGAAGAGGTTGAATGTGATGAAATCAGACCTGAGGAATGGACTGACCCAGACTTTCTCTATGCTAATTATTCCTTCCACCAAGAATCTGCAGCTGAGAGTGGTAAAACCTATTCAGAAGGTGTTTCTTTAAATTCAACTTCCAggttttatgtcatttcaaggGGGTCGTGTGCAGAGAGCAGAGTCACAGATACCCGATGTAACTCTGTTGTGTACTCTGTTGTTCAACTTCCCAAAGAGCAAACTTGGCAATCTGAACCAAATCAATCTGAAAGCAACTAAAATGACTCCATCTATTCCCTGGCTCGCTGACACAGGCAACCAAAAGGAGGCTGCCGTGGTCAAAATGAACTTTCTTGATCAAGTCAGGACAGtgaagaaaaggaa
>XM_039809045.1
CTGTGGTCGGACTGACCTGATCATTTCTGTACACTTGTTTGTTGTTCTTTGATCGTCATTTTCACAATGACAGACATCTTTGTGTACTCTTGTCTTCTTTCTgCTCTGAGTATTGTGGAGATGAAGCCTCTCATCATTGGTGGCCGTGTTGGGGAAAATGTGACATTCAGATGCTCAGAGTGGAATACTTGGATGAATGTAGAATCTAATGATAAATACTTTTGTAATAGTCCATGCACAGAAGACAAACACATTATCATCAAAGCAGCATTTGGAGAGactaaacataaaaacagaataaagttGACTAACAGAGCAAAAGGTTTAGTTGTAACCTTCAGTAATCTCCAAAAGTCAGACTCTAAGACATATTATTGTGGAGTGGTGAGATTTGCCCGTGATTCATTTATAATGGTGAATCTTAAAGTTACAGATGCTGAGTCTTCAAGTCCCAAGACAACCCCTGAAACAGTCATTGATGGTTCTACTCCCTCATTTGCTGTATCAAACAGCTCCCATGAGTCTTTAAGCAGCTCAGAAATGATAACTGATATGGCTAGATCATACATGACAACAACACCTACTGCATCAGCAACACAAGGAGCCGGAAGTGTACCATATTTGATCATAGGTGTCATTGTCATAATAACCATACTGATGGTCTTACTGAAGCTTATGAGGAAGATGAGAATGAAACAACTGAAATTTGTGTCAAGTGCTGATACACCAAAGGAAGACGTACCAGAAGAGGTTGAATGTGATGAAATCAGACCTGAGGAATGGACTGACCCAGACTTTCTCTATGCTAATTATTCCTTCCACCAAGAATCTGCAGCTGAGAGTGGTAAAACCTATTCAGAAGGTGTTTCTTTAAATTCAACTTCCAggttttatgtcatttcaaggGGGTCGTGTGCAGAGAGCAGAGTCACAGATACCCGATGTAACTCTGTTGTGTACTCTGTTGTTCAACTTCCCAAAGAGCAAACTTGGCAATCTGAACCAAATCAATCTGAAAGCAACTAAAATGACTCCATCTATTCCCTGGCTCGCTGACACAGGCAACCAAAAGGAGGCTGCCGTGGTCAAAATGAACTTTCTTGATCAAGTCAGGACAGtgaagaaaaggaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809036.1 False 1119 mRNA 0.39 5 20182899 20186136
XM_039809045.1 True 1131 mRNA 0.40 6 20182899 20186395

Neighbor

gene id symbol gene type direction distance location
LOC120556938 LOC104960150 coding downstream 56294 20114806 ~ 20126605 (-)
LOC120565191 LOC103366463,LOC102211221,LOC102302105,LOC101484083 coding downstream 94260 20044965 ~ 20088639 (-)
stra6l LOC104958947 coding downstream 140815 20033839 ~ 20042084 (-)
tdrd7a NA coding downstream 150061 20011154 ~ 20032838 (-)
tmod1 tmod1 coding downstream 176238 19985410 ~ 20006661 (-)
LOC120556991 NA coding upstream 11626 20198021 ~ 20199878 (-)
LOC120565775 sgcz coding upstream 27322 20213717 ~ 20621798 (-)
tppp2 LOC103374906,LOC101485391,LOC102784423 coding upstream 636102 20822497 ~ 20827923 (-)
LOC120571719 NA coding upstream 655686 20842081 ~ 20845093 (-)
LOC120557145 NA coding upstream 660329 20846724 ~ 20847666 (-)
G6264 NA non-coding downstream 605 20182039 ~ 20182294 (-)
G6242 NA non-coding downstream 262619 19917116 ~ 19920280 (-)
G6233 NA non-coding downstream 341184 19839154 ~ 19841715 (-)
G6131 NA non-coding downstream 431081 19751601 ~ 19751818 (-)
G6093 NA non-coding downstream 633741 19548778 ~ 19549158 (-)
G6269 NA non-coding upstream 9883 20196278 ~ 20203695 (-)
G6297 NA non-coding upstream 558753 20745148 ~ 20745353 (-)
G6387 psmd12 non-coding upstream 793790 20980185 ~ 20983277 (-)
G6410 NA non-coding upstream 947115 21133510 ~ 21135891 (-)
G6471 NA non-coding upstream 1133623 21320018 ~ 21320682 (-)
spink4 NA other downstream 138173 20042763 ~ 20044726 (-)
micu3a micu3,LOC100706756,LOC102779354,LOC101479276 other downstream 386377 19766497 ~ 19796522 (-)
LOC120569510 NA other downstream 417512 19764893 ~ 19765387 (-)
G6084 NA other downstream 636972 19489588 ~ 19545927 (-)
cxcl12b cxcl12,LOC108241502,LOC100709445,LOC104922054,LOC102798533 other downstream 1145818 19023216 ~ 19037081 (-)
LOC120574674 NA other upstream 886 20187281 ~ 20193338 (-)
LOC120566957 NA other upstream 1376696 21563091 ~ 21569059 (-)
G6592 ube2o,LOC106534564 other upstream 1522145 21708540 ~ 21709812 (-)
LOC120556502 LOC104944681,LOC103364456 other upstream 2142124 22328519 ~ 22335583 (-)
LOC120565362 pik3r6 other upstream 2478980 22665375 ~ 22692333 (-)

Expression


Co-expression Network