LOC120564231 (LOC103355955,LOC104967895)


Basic Information

Item Value
gene id LOC120564231
gene name LOC103355955,LOC104967895
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 35732968 ~ 35739670 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809074.1
CCGAACAGGGATCCATATGCGCCATTTTGAGTGTGGAAATGCGCTGCGGGTGTGACAGCGGGTTTAATTCACGCACCTAATTAAAACGCATCGCTCGACACGGCGCAGGAAGCAGAATCGCACGTTCCCAACAGACAAACCCCGGATGTCTTTAGTATAATTAAGTTTCCAGTTCTATAAGCAGTCCAACTTTGGTTGCATAAACTCCCACGCGTTGCGCAACTTATAGGTCGTGCATTGCCTCCAGTGTATTTTGCCTCACCTGTCATGGAGGAAAAGAGCTCCTACGTTTGCCGTTACATATCCCTGTGACGTTGCAACCGGCGAAATATTACTTAAGCGACTTTTATAGCTCACCTCTACCGCAGAAAAGTTATCGCAGCATCAGATTAAAGCCACCAGccggcagaaaaaaaaagCCTACAGTATGGCTCTCAGAGGTGCCGTCACCCGCCTGCTCTCCAACAGCCAAAAATGTGCTGCTGTCACGGTGTCTAGAGCCCAGGGCACAGCTGCTACCGCTGCCAAAGATgctgaagaaaataaaaagccaACGAAGGAACCCAAGGTGGCCTTCAACTGGCGGGATGCACTGAATCTGGAGGGCCAGCTGACCGAGGAGGAGATCATGATCCGGGACTCTTTCCGCGACTACTGCCAGGAAAAACTCATGCCCCGCATCCTCATGGCCAACAGACACGAACATTTCCACCGTGAGATTGTCTCAGAGATGGGAGAGTTGGGCGTCTTAGGCCCAACTATTAAAGGGTACGGCTGTGCAGGCACGAGTTATGTGGCGTACGGCTTGATTGCCAGAGAGGTTGAGCGAGTGGACAGCGGGTATCGGTCGGTCATGAGTGTCCAGTCTTCACTGGTCATGCACCCTATCAATGCTTATGGCACTGAGGCCCAAAAGGAGAAGTACCTGCCCCGGCTTGCTCGGGGAGAAATCCTGGGCTGCTTTGGCTTGACGGAGCCTAACCACGGCAGTGATCCCAGCAGTATGGAGACCAAGGCCAAATACAACCCATCCAGTGGTACCTTCACCATCAGTGGAGCCAAGACCTGGATCACAAATTCCCCCGTGGCAGACATCGCAGTGGTGTGGGCCAAGTGTGAAGATGGTAAGGTGCGGGGTTTCATCTTGGAGCGTGGGATGAAGGGGTTGGCCACCCCCAAGATTGAGGGCAAGTTCTCGCTGAGGGCGTCCGCCACCGGCATGATCCTGATGGACGAAGTGGAAGTTCCCCAGGAGAACCTGCTGCCCAACGTCTCTGGTCTGGCTGGTCCTTTTGGCTGTCTGAACAACGCCCGGTATGGCATTGCATGGGGAGCTCTGGGAGCTGCTGAATTCTGCTTCCATGCTGCACGGCAGTACACGCTGGACAGAATCCAGTTTGGGGTGCCACTGGCCAGGAACCAGCTGATGCAGAAGAAAATGGCTGACATGCTGACAGAGATCACCCTTGGGCTGCAGTCCTGTCTGACCCTGGGAAGACTTATTGATCAGAAGAAAGCAGCACCAGATATGATCTCCATGCTAAAGAGGAATAGCTGTGGCAAGGCTTTGGATATTGCCAGACAAGCCAGAGACATGCTGGGAGGAAATGGCATCGCAGATGAGTACCACATAATCCGTCACGTCATGAACCTGGAGGCCGTCAACACATACGAGGGAACTCACGACATCCATGCCTTGATCCTGGGCAGAGCCATCACTGGACTGCAGTCTTTCACTGTTGGAAAGTAAAGGTTGAAATGGACTTGATGTGGATTAGTGCCGTGCTACCTGTTTGCCATTGGGCAAACTCATGTGTATAGAAACATAAAGTGCACTTAATCTGTCTCACATTATGAGCGTTGGCTGGTGGGATGAATCTCAAATGGCTcattacattttatgttttcaaACTAGCGATATGAGCCGTCTGTTACTGTCTCTGTTCGGTGTCTTTGGTGAATATCTAAGGTCAACCTAACTAAGCATTGCGTCCAACTGGGATGACATTTATAGTTAGGATGCCTAAAATATACTTCACATACTGACTATGAAGGGTGCATGTAAATGTTGTGGCATTATGTTGGTTTATTTTGTGAtaattaaatatgtaaataaatggcTTTGAATGAGAAATATATTGAGTGTAGCTGAGATTCAGTATGTACAGATCCCTTGATACAGACTACAAATCTCTTCTGTTGTCATATTACATTATCATGTTAGTTACTGTAGGTCTGAATAACTCTCATTTAAGTGTTGGTGTAAAATGTTAAACACCTGAGAGCAAAATAACATGGTTTATTTTGTCCTTGTTGTACTTGTATTTATTAAATCAACGGATGCTGGAATTGAACATACATTAAAACATGGAttcag
>XM_039809084.1
CCGAACAGGGATCCATATGCGCCATTTTGAGTGTGGAAATGCGCTGCGGGTGTGACAGCGGGTTTAATTCACGCACCTAATTAAAACGCATCGCTCGACACGGCGCAGGAAGCAGAATCGCACGTTCCCAACAGACAAACCCCGGATGTCTTTAGTATAATTAAGTTTCCAGTTCTATAAGCAGTCCAACTTTGGTTGCATAAACTCCCACGCGTTGCGCAACTTATAGGTCGTGCATTGCCTCCAGTGTATTTTGCCTCACCTGTCATGGAGGAAAAGAGCTCCTACGTTTGCCGTTACATATCCCTGTGACGTTGCAACCGGCGAAATATTACTTAAGCGACTTTTATAGCTCACCTCTACCGCAGAAAAGTTATCGCAGCATCAGATTAAAGCCACCAGccggcagaaaaaaaaagTATGGCTCTCAGAGGTGCCGTCACCCGCCTGCTCTCCAACAGCCAAAAATGTGCTGCTGTCACGGTGTCTAGAGCCCAGGGCACAGCTGCTACCGCTGCCAAAGATgctgaagaaaataaaaagccaACGAAGGAACCCAAGGTGGCCTTCAACTGGCGGGATGCACTGAATCTGGAGGGCCAGCTGACCGAGGAGGAGATCATGATCCGGGACTCTTTCCGCGACTACTGCCAGGAAAAACTCATGCCCCGCATCCTCATGGCCAACAGACACGAACATTTCCACCGTGAGATTGTCTCAGAGATGGGAGAGTTGGGCGTCTTAGGCCCAACTATTAAAGGGTACGGCTGTGCAGGCACGAGTTATGTGGCGTACGGCTTGATTGCCAGAGAGGTTGAGCGAGTGGACAGCGGGTATCGGTCGGTCATGAGTGTCCAGTCTTCACTGGTCATGCACCCTATCAATGCTTATGGCACTGAGGCCCAAAAGGAGAAGTACCTGCCCCGGCTTGCTCGGGGAGAAATCCTGGGCTGCTTTGGCTTGACGGAGCCTAACCACGGCAGTGATCCCAGCAGTATGGAGACCAAGGCCAAATACAACCCATCCAGTGGTACCTTCACCATCAGTGGAGCCAAGACCTGGATCACAAATTCCCCCGTGGCAGACATCGCAGTGGTGTGGGCCAAGTGTGAAGATGGTAAGGTGCGGGGTTTCATCTTGGAGCGTGGGATGAAGGGGTTGGCCACCCCCAAGATTGAGGGCAAGTTCTCGCTGAGGGCGTCCGCCACCGGCATGATCCTGATGGACGAAGTGGAAGTTCCCCAGGAGAACCTGCTGCCCAACGTCTCTGGTCTGGCTGGTCCTTTTGGCTGTCTGAACAACGCCCGGTATGGCATTGCATGGGGAGCTCTGGGAGCTGCTGAATTCTGCTTCCATGCTGCACGGCAGTACACGCTGGACAGAATCCAGTTTGGGGTGCCACTGGCCAGGAACCAGCTGATGCAGAAGAAAATGGCTGACATGCTGACAGAGATCACCCTTGGGCTGCAGTCCTGTCTGACCCTGGGAAGACTTATTGATCAGAAGAAAGCAGCACCAGATATGATCTCCATGCTAAAGAGGAATAGCTGTGGCAAGGCTTTGGATATTGCCAGACAAGCCAGAGACATGCTGGGAGGAAATGGCATCGCAGATGAGTACCACATAATCCGTCACGTCATGAACCTGGAGGCCGTCAACACATACGAGGGAACTCACGACATCCATGCCTTGATCCTGGGCAGAGCCATCACTGGACTGCAGTCTTTCACTGTTGGAAAGTAAAGGTTGAAATGGACTTGATGTGGATTAGTGCCGTGCTACCTGTTTGCCATTGGGCAAACTCATGTGTATAGAAACATAAAGTGCACTTAATCTGTCTCACATTATGAGCGTTGGCTGGTGGGATGAATCTCAAATGGCTcattacattttatgttttcaaACTAGCGATATGAGCCGTCTGTTACTGTCTCTGTTCGGTGTCTTTGGTGAATATCTAAGGTCAACCTAACTAAGCATTGCGTCCAACTGGGATGACATTTATAGTTAGGATGCCTAAAATATACTTCACATACTGACTATGAAGGGTGCATGTAAATGTTGTGGCATTATGTTGGTTTATTTTGTGAtaattaaatatgtaaataaatggcTTTGAATGAGAAATATATTGAGTGTAGCTGAGATTCAGTATGTACAGATCCCTTGATACAGACTACAAATCTCTTCTGTTGTCATATTACATTATCATGTTAGTTACTGTAGGTCTGAATAACTCTCATTTAAGTGTTGGTGTAAAATGTTAAACACCTGAGAGCAAAATAACATGGTTTATTTTGTCCTTGTTGTACTTGTATTTATTAAATCAACGGATGCTGGAATTGAACATACATTAAAACATGGAttcag

Function

NR:

description
PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial-like

GO: NA

KEGG:

id description
K00252 GCDH, gcdH; glutaryl-CoA dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809074.1 True 2377 mRNA 0.48 12 35732968 35739670
XM_039809084.1 False 2370 mRNA 0.48 12 35732968 35739670

Neighbor

gene id symbol gene type direction distance location
LOC120555967 NA coding downstream 41940 35688489 ~ 35691028 (-)
prdx2 prdx2,LOC106526939 coding downstream 104076 35623904 ~ 35628892 (-)
grk4 grk4 coding downstream 190885 35493057 ~ 35542083 (-)
htt htt coding downstream 240609 35456939 ~ 35492359 (-)
LOC120569607 NA coding downstream 255608 35477231 ~ 35477360 (-)
nfil3-5 NA coding upstream 76102 35815772 ~ 35825168 (-)
LOC120563277 NA coding upstream 89085 35828755 ~ 35831299 (-)
klf1 LOC106569090,LOC105898955,LOC107700996,LOC107559026 coding upstream 104617 35844287 ~ 35848461 (-)
LOC120566690 ddx17,LOC105012177 coding upstream 244576 35984246 ~ 35993088 (-)
LOC120566152 kiaa0430 coding upstream 282508 36022178 ~ 36041403 (-)
G10143 NA non-coding downstream 30376 35698632 ~ 35702592 (-)
G10091 NA non-coding downstream 80797 35651972 ~ 35652171 (-)
G10063 NA non-coding downstream 159524 35562913 ~ 35573444 (-)
G10061 NA non-coding downstream 174810 35557548 ~ 35558158 (-)
G9993 NA non-coding downstream 328319 35403414 ~ 35404649 (-)
G10174 NA non-coding upstream 59951 35799621 ~ 35843137 (-)
G10198 NA non-coding upstream 181185 35920855 ~ 35921076 (-)
G10200 NA non-coding upstream 189079 35928749 ~ 35929260 (-)
G10202 NA non-coding upstream 191929 35931599 ~ 35931855 (-)
G10349 NA non-coding upstream 422346 36162016 ~ 36166879 (-)
LOC120572869 NA other downstream 146355 35584470 ~ 35586613 (-)
rgs12b rgs12,LOC104946104 other downstream 281757 35404815 ~ 35451211 (-)
G9997 NA other downstream 332494 35398640 ~ 35400474 (-)
G9740 NA other downstream 1275333 34452850 ~ 34457635 (-)
stox2a stox2,LOC100702551,LOC102293991,LOC101478850,LOC102775740 other downstream 2207453 33497102 ~ 33525515 (-)
micall1a LOC100693188 other upstream 204378 35944048 ~ 35969266 (-)
slc5a10 slc5a10,LOC102791530,LOC103460715 other upstream 493537 36233207 ~ 36256880 (-)
LOC120547992 NA other upstream 537184 36276854 ~ 36280814 (-)
LOC120561459 LOC103359169,LOC107395760 other upstream 590111 36329781 ~ 36337148 (-)
LOC120560464 kcnq5,LOC100711684,LOC102297355 other upstream 784601 36524271 ~ 36718918 (-)

Expression


Co-expression Network