LOC120564537


Basic Information

Item Value
gene id LOC120564537
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 13393147 ~ 13404145 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039809606.1
GCAGTGCAGGAAGTAGCCTACTCTCGTCAGAGGAAGAAATTGTTCCGAGAACGGGGTGCAACTGGAGAAACTGTTTTTACGTTACGCACTTTATTGAACTTGGACAGTTGGAGCAAATTGAAGAAATTGATGGAATACTTGCGACATATTGGAGTATATAATAAGATATAGCTAATTACTTCTAAGTTGTGAATAGCGAGTAGAGACTAGTGGAGGGCAGCAATACGCCATAGATGCGTCTAGCCTGCCGGAAACatgaagcagaagaagaagaataaggagaagaagaagaagaaaggaagaagaaaggaagaagtTGGCCACGGCTTCGGGCCACGGCAGGTAGGGGAACACGGAAGTGAGGAGCAGGTGATTAATGTGGGCGGTGTTCAGGCTCAGGTGATTGGGAGCCGGATCGCTGGATTCTTCCAGGATCATACCAGCGTTAATATGATCACTGGTCTACCGGGACGTTTTAGTCTACTACAGAAGAGACAAGACAACAGAAATAGGGACGCGAAAAAGTAAATGGTTTAATGGAGAAGGGGAGGAGATGCTTAGAACGCACTTTTATCTACATCCTGGTAGCAGTGATAATCTTCTTCATCTTTCTCAACTGTAACCGGGAGTTGAACTTGAACAGGGCTAATCCAAGACCCCCATCAGCACCAGAGCCACAATGGGAGGATCCTGGGCCGTATCATGTGGCCTATCCACGAGACTACAAGTTTATCATGGATGACACGCGGACGTGCAAGAACACCACTCCTTTCCTGGTCCTGATGGTTCCGGTTGCACCCGGTGACGTGGCAGCACGGGACACCATCCGGAAGACGTGGGGAAATGAGAAACTGGTTCTGAGTCAGCTGATCGAGACTCTCTTCATACTGGGCCGACCGGGGGGAGCTGATgctgagcagcagcaggagaagCTCAAACAGGAGAacctgcagcaccatgatctgATCCAGAGTAACTTCCGGGACAGCTACCGCAATCTGACCATCAAGACAATGGTGATGCTGGAGTGGCTGGCTGTGCACTGTGCCGAGGCTTCCTACGTCATAAAGATTGACTCCGATATGTTACTGCATGTCCCAAATTTGGTTAAGCTGTTGCTGGATCACAGAACGGCCAAACAAAACTACATGACAGGTTTGGTGTGGTGGAACAGCCCGGTTTTGAGAAACCCCTTCAACAAGTTCTACATGCCAACAAAAGTGATTGCTGAGCCACAGTACCCTCCATATCCTCTGGGCATGGCCTACGTCATGTCCCTGGACCTGCCTGCCAAGATCCTGGTAGCCGCTCCTCATATTAAACCGATCTTCATAGAAGATGCCTACCTGGGTATGTGCCTAAAATACTTGGGCCTCTCCCCCACCGACCCTCCTGAAAATAATATGTTTATTGTGAAACCTGCACATCCTCTGAGCAGCTGCAGCCTTTCAAAAGTGATCGCCATGACAACGACAAGCATCTCACAGATGACGTGTTACTGGGAGAGGAGCAGACTGCCAGAAGCTAAATGTTAAACTTTTGTCTTGTTTACCAACACTGAATCGGACAAATATTGTACAGAAATTAAAATTGtgcatatttattttgtttgcagACATGGAAGCTCCTTGGTTGGAcagaaattgtttgttttttgttcaacAGACAAAACCGATTTTGACCAAATGCCTTCTTGTTATCAAATGTGCTTCTCAGCCAGCCGGGCTTTCAGAATTTTCTGAGCTGTATCAGCTCTCACACAGTGAAGAACATCTGCTGTATTCTAAACTTAAAATAAACCGTGTTTGGTGGGTTATCTCCTGAAAAACTCCTAA
>XM_039809617.1
TAGTGCAGTGCAGGAAGTAGCCTACTCTCGTCAGAGGAAGAAATTGTTCCGAGAACGGGGTGCAACTGGAGAAACTGTTTTTACGTTACGCACTTTATTGAACTTGGACAGTTGGAGCAAATTGAAGAAATTGATGGAATACTTGCGACATATTGGAGTATATAATAAGATATAGCTAATTACTTCTAAGTTGTGAATAGCGAGTAGAGACTAGTGGAGGGCAGCAATACGCCATAGATGCGTCTAGCCTGCCGGAAACatgaagcagaagaagaagaataaggagaagaagaagaagaaaggaagaagaaaggaagaagtTGGCCACGGCTTCGGGCCACGGCAGGTTTAATGGAGAAGGGGAGGAGATGCTTAGAACGCACTTTTATCTACATCCTGGTAGCAGTGATAATCTTCTTCATCTTTCTCAACTGTAACCGGGAGTTGAACTTGAACAGGGCTAATCCAAGACCCCCATCAGCACCAGAGCCACAATGGGAGGATCCTGGGCCGTATCATGTGGCCTATCCACGAGACTACAAGTTTATCATGGATGACACGCGGACGTGCAAGAACACCACTCCTTTCCTGGTCCTGATGGTTCCGGTTGCACCCGGTGACGTGGCAGCACGGGACACCATCCGGAAGACGTGGGGAAATGAGAAACTGGTTCTGAGTCAGCTGATCGAGACTCTCTTCATACTGGGCCGACCGGGGGGAGCTGATgctgagcagcagcaggagaagCTCAAACAGGAGAacctgcagcaccatgatctgATCCAGAGTAACTTCCGGGACAGCTACCGCAATCTGACCATCAAGACAATGGTGATGCTGGAGTGGCTGGCTGTGCACTGTGCCGAGGCTTCCTACGTCATAAAGATTGACTCCGATATGTTACTGCATGTCCCAAATTTGGTTAAGCTGTTGCTGGATCACAGAACGGCCAAACAAAACTACATGACAGGTTTGGTGTGGTGGAACAGCCCGGTTTTGAGAAACCCCTTCAACAAGTTCTACATGCCAACAAAAGTGATTGCTGAGCCACAGTACCCTCCATATCCTCTGGGCATGGCCTACGTCATGTCCCTGGACCTGCCTGCCAAGATCCTGGTAGCCGCTCCTCATATTAAACCGATCTTCATAGAAGATGCCTACCTGGGTATGTGCCTAAAATACTTGGGCCTCTCCCCCACCGACCCTCCTGAAAATAATATGTTTATTGTGAAACCTGCACATCCTCTGAGCAGCTGCAGCCTTTCAAAAGTGATCGCCATGACAACGACAAGCATCTCACAGATGACGTGTTACTGGGAGAGGAGCAGACTGCCAGAAGCTAAATGTTAAACTTTTGTCTTGTTTACCAACACTGAATCGGACAAATATTGTACAGAAATTAAAATTGtgcatatttattttgtttgcagACATGGAAGCTCCTTGGTTGGAcagaaattgtttgttttttgttcaacAGACAAAACCGATTTTGACCAAATGCCTTCTTGTTATCAAATGTGCTTCTCAGCCAGCCGGGCTTTCAGAATTTTCTGAGCTGTATCAGCTCTCACACAGTGAAGAACATCTGCTGTATTCTAAACTTAAAATAAACCGTGTTTGGTGGGTTATCTCCTGAAAAACTCCTAACCCTGGGGCTAAAAGTTGCCAGTGTGAAAACCGGGTTAAGggaatgtaaatataaatgataTGCTATAGGACTGTTACATTAACTGGTAGAGACCCAAGTTTCTAAGTTATCATTGAGGATATAgttcaaagaaaaaaatgtaaataagaaGGCAGACTGGATGGAAAACTCTCCGCCCACTTTGCAACTCTATCCAACATACTGGGGTGGGGTTAAGTAAACCGGTTAGGTGGGCTAAATGGGGCAAACGTGAGGAAGGAAGTGTAAGCTGGCTTAGCCAGATACCCCTTTCAGTCTTTTGTGTTTAAGGAGGGAGACCTGCAGCTATCAGAACAGAATGTGTGGTCAGTCATACAGTTGGTTTGCCATGATTGGCCTTAAACCCAGTACATTCAGGTATATctctacagtatataatattaTCCATATAGTGATGGGGAGATAAAGCATTATGAAGCTTTGGTACTATCTTTAAATttgtgttggaaaaaaaagattaaaccAATCTTCCTCGTC
>XM_039809627.1
TGTCGCATGGAAAAGTGCTGCGAGTATGaaaagtgaaagtaaaaaaagtgaaaaggaaAGCCAGTAACAGGACAGAGCTAATACTTCATTAAAGTTTAATGGAGAAGGGGAGGAGATGCTTAGAACGCACTTTTATCTACATCCTGGTAGCAGTGATAATCTTCTTCATCTTTCTCAACTGTAACCGGGAGTTGAACTTGAACAGGGCTAATCCAAGACCCCCATCAGCACCAGAGCCACAATGGGAGGATCCTGGGCCGTATCATGTGGCCTATCCACGAGACTACAAGTTTATCATGGATGACACGCGGACGTGCAAGAACACCACTCCTTTCCTGGTCCTGATGGTTCCGGTTGCACCCGGTGACGTGGCAGCACGGGACACCATCCGGAAGACGTGGGGAAATGAGAAACTGGTTCTGAGTCAGCTGATCGAGACTCTCTTCATACTGGGCCGACCGGGGGGAGCTGATgctgagcagcagcaggagaagCTCAAACAGGAGAacctgcagcaccatgatctgATCCAGAGTAACTTCCGGGACAGCTACCGCAATCTGACCATCAAGACAATGGTGATGCTGGAGTGGCTGGCTGTGCACTGTGCCGAGGCTTCCTACGTCATAAAGATTGACTCCGATATGTTACTGCATGTCCCAAATTTGGTTAAGCTGTTGCTGGATCACAGAACGGCCAAACAAAACTACATGACAGGTTTGGTGTGGTGGAACAGCCCGGTTTTGAGAAACCCCTTCAACAAGTTCTACATGCCAACAAAAGTGATTGCTGAGCCACAGTACCCTCCATATCCTCTGGGCATGGCCTACGTCATGTCCCTGGACCTGCCTGCCAAGATCCTGGTAGCCGCTCCTCATATTAAACCGATCTTCATAGAAGATGCCTACCTGGGTATGTGCCTAAAATACTTGGGCCTCTCCCCCACCGACCCTCCTGAAAATAATATGTTTATTGTGAAACCTGCACATCCTCTGAGCAGCTGCAGCCTTTCAAAAGTGATCGCCATGACAACGACAAGCATCTCACAGATGACGTGTTACTGGGAGAGGAGCAGACTGCCAGAAGCTAAATGTTAAACTTTTGTCTTGTTTACCAACACTGAATCGGACAAATATTGTACAGAAATTAAAATTGtgcatatttattttgtttgcagACATGGAAGCTCCTTGGTTGGAcagaaattgtttgttttttgttcaacAGACAAAACCGATTTTGACCAAATGCCTTCTTGTTATCAAATGTGCTTCTCAGCCAGCCGGGCTTTCAGAATTTTCTGAGCTGTATCAGCTCTCACACAGTGAAGAACATCTGCTGTATTCTAAACTTAAAATAAACCGTGTTTGGTGGGTTATCTCCTGAAAAACTCCTAACCCTGGGGCTAAAAGTTGCCAGTGTGAAAACCGGGTTAAGggaatgtaaatataaatgataTGCTATAGGACTGTTACATTAACTGGTAGAGACCCAAGTTTCTAAGTTATCATTGAGGATATAgttcaaagaaaaaaatgtaaataagaaGGCAGACTGGATGGAAAACTCTCCGCCCACTTTGCAACTCTATCCAACATACTGGGGTGGGGTTAAGTAAACCGGTTAGGTGGGCTAAATGGGGCAAACGTGAGGAAGGAAGTGTAAGCTGGCTTAGCCAGATACCCCTTTCAGTCTTTTGTGTTTAAGGAGGGAGACCTGCAGCTATCAGAACAGAATGTGTGGTCAGTCATACAGTTGGTTTGCCATGATTGGCCTTAAACCCAGTACATTCAGGTATATctctacagtatataatattaTCCATATAGTGATGGGGAGATAAAGCATTATGAAGCTTTGGTACTATCTTTAAATttgtgttggaaaaaaaagattaaaccAATCTTCCTCGTC

Function

GO:

id name namespace
GO:0008276 protein methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039809606.1 False 1835 mRNA 0.47 2 13393664 13404141
XM_039809617.1 True 2167 mRNA 0.45 2 13393147 13404145
XM_039809627.1 False 1914 mRNA 0.45 2 13393147 13401911

Neighbor

gene id symbol gene type direction distance location
LOC120564530 NA coding downstream 1112 13384811 ~ 13392035 (-)
LOC120567325 LOC104941710 coding downstream 35445 13322665 ~ 13357702 (-)
LOC120567925 NA coding downstream 227621 13140281 ~ 13165526 (-)
LOC120564587 NA coding downstream 278005 13098899 ~ 13115142 (-)
LOC120564607 LOC103367033 coding downstream 286197 13103809 ~ 13106950 (-)
LOC120568624 LOC107104464 coding upstream 4588 13408733 ~ 13415673 (-)
LOC120558389 LOC104933357,LOC103367030,LOC103383226,LOC100692841 coding upstream 24295 13428440 ~ 13474559 (-)
soul5l LOC104926857,LOC103375185,LOC100694454 coding upstream 194585 13598730 ~ 13607821 (-)
LOC120558365 gpr108,LOC107090075 coding upstream 206154 13610299 ~ 13623167 (-)
LOC120558503 NA coding upstream 226449 13630594 ~ 13632316 (-)
G4066 NA non-coding downstream 120973 13195046 ~ 13272174 (-)
G4032 NA non-coding downstream 235930 13089192 ~ 13157217 (-)
LOC120567935 NA non-coding downstream 240301 13151720 ~ 13152846 (-)
LOC120567932 NA non-coding downstream 241524 13138058 ~ 13151623 (-)
G3995 NA non-coding downstream 328086 13058846 ~ 13065061 (-)
G4115 LOC101079010,LOC105939483,LOC106946826,LOC103153258,LOC106910155 non-coding upstream 83775 13487920 ~ 13491997 (-)
LOC120558524 NA non-coding upstream 115856 13520001 ~ 13536248 (-)
LOC120558530 NA non-coding upstream 361048 13765193 ~ 13767856 (-)
G4354 NA non-coding upstream 641215 14045360 ~ 14045719 (-)
G4359 NA non-coding upstream 651298 14055443 ~ 14056457 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 352867 13037270 ~ 13040280 (-)
LOC120560419 LOC103368013,LOC106919771,LOC106522471 other downstream 364754 12990564 ~ 13028393 (-)
trnac-gca_3 NA other downstream 527108 12865968 ~ 12866039 (-)
trnac-gca_2 NA other downstream 530546 12862530 ~ 12862601 (-)
trnac-gca_1 NA other downstream 531382 12861694 ~ 12861765 (-)
G4168 NA other upstream 127608 13531753 ~ 13567266 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other upstream 614757 14018902 ~ 14042510 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other upstream 1307999 14712144 ~ 14719102 (-)
ubl5 ubl5 other upstream 1497001 14901146 ~ 14904229 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 2022399 15426544 ~ 15685639 (-)

Expression


Co-expression Network