LOC120564947 (LOC101485601,LOC102207182,LOC103357494,LOC100703355,LOC102781869,LOC102299071)


Basic Information

Item Value
gene id LOC120564947
gene name LOC101485601,LOC102207182,LOC103357494,LOC100703355,LOC102781869,LOC102299071
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 34390148 ~ 34400994 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810220.1
AAAGGAGGAGCAAACTGCACCTATTCATAAGGACAGCCTGGTAGGCCACTGCACAGTCTATGCTGcacccacacatacactgtAGGCTATTATTGTACATACGGCAGAAACATGGCTGTACTCGGGAGTTACTCGGCACCTTTACTTGGAATCAGCATCTTCATCGCTACTCTGACCTACATCACCTACAAGCTGCTCAGCGGTTACCTGCACAAATGGTTCACGATGAAGCCTATTCCTCAGGCCGACGGAACACATATCTTTATTGGAAATGCATTCCAGTTCAAATACAATGCgggagatttcttTCAGCAAATTATGGACTTCACCCGTGACTTCGCGAACGCTCCGCTATTTAAACTCTGGATCGGACCAATCCCATTTGTGATCCTGTTTCATCCTGAAACAGTTGAGACGGTTCTGACCAACGCTGTTCACATGGAGAAATCCTATGCGTACAAATTCCTCCACCCTTGGCTTGGAACTGGCCTTCTTACTAGCACTGGCCTTAAGTGGCGTCAGCGGCGGAAGATGTTGACCCCCACCTTCCACTTCTCCATCCTGACGGACTTCTTGGAAGTGATGAACGAGCAGGCAGAGATCCTGGTGCAGAAGCTGGAGAAGCAGGTGGGGAAGGGTCCATTCGACTGCTTCAGCCACATAACCCTGTGTGCCCTGGACATCATCTGTGaaactgcaatggggaaaaaaatttaTGCCCAGAGTAATTCTGACTCGGAGTATGTTAAGTGCGTGTACAAAATGAGTGACATTGTCAGCCGCAGACAGAGGTCTCCTTGGTTTTGGCCTGACTTTGTGTACAGCTACTTTGGTGAGGGTCGGAAGCATGACAAGACCCTCAAGATCCTGCACTCCTTTACATACAAAGTGATCCATGAAAGAATGGAGAACATTTCCTATAATGAATCAGACAGCGACTCTGACAAGGGCACGAAGAAAAGACGAGCATTTCTGGACATGCTCTTGAAGACCACATATGAGGATGGCAGCAAAATGAGCCATCAGGACATTCAGGAAGAAGTGGACACCTTTATGTTTGAGGGACATGATACTACAGCAGCCTCTATGAACTGGACCATACATCTGCTGGGCTCCCACCCTGAGGCGCACAGGAAAGTTCAACAAGAGCTTCAGGAGGTCTTCGGTACATCTGACCGGCCCGTAAACGTAGAGGACCTGAAGAAGCTCAAATACCTGGAGTGTGTGATCAAGGAGGCGCTGCGACTGTTTCCCTCTGTGCCTTTCTTTGCCCGCAGCATCGGTGAAGACTGCCacatcaATGGTTTCAAGGTACCCAAAGGTGCCAATGCCATCATCATTACCTACTCTCTCCACCGTGACCCGCGGTACTTCCCTGAGCCCGAGGAGTTCAGGCCTGAGCGCTTCCTGCCTGAGAATTCAGTGGGAAGGCCTCCGTATGCATACATCCCCTTCTCCGCTGGACTCCGCAACTGTATCGGTCAACGTTTTGCACTTATGGAAGAAAAGGTGATCTTGGCGTCCATTCTGCGTAACTTTAGCGTTGAAGCTTGTCAGACACGTGAAGAGCTGCGGCCGTTAGGAGAGCTCATCCTGCGACCAGAGAAGGGCATCGTGATCAAACTGGAAAAGAGGACACCCCCAACTTCATCAAACTAGCAGCTGCTCAGGTTCACAGAAGCTATTTTCTAGATTCCCCTTCCTTCGTGGCCTTTATTCACAGAACATCCTGCCCAATTCTAATGGTGGTGGATACTGTGATCGTTTCTAAATACTCTTAGTAGTgaccagggttcaaaattaactttttcgtccaccagccaaatggctagtgaatgctTACTTTTTACCAGCCAATCAATAgataagggactgttcgttactTATTTAAGGGGCTACCGTAGGAGTTACGAtatctttagtcaaaatagacttgaccctcccttTGCCAGCGatacatttttctatgaccctttCTATGTTTGGGAAAAGAGGCATCCCCAATAATTTAttgatgccttctgtactggttcGAGCTTGGCAAAGATGTACAGATAGCCACTGCTTTTTTTACAATCATGACATATGCCTTACCaccaatttccaccaactgcggaacgtctgcggatctgctccggaacggcggcggagtcaataggtttccattaaagtcaatgtgtgtattttcactgaCTGCAGAATGAGTCCATTAAGCAAAGCACAATGGGTAacaaattcaacacacaaactggttgctatggactcgtcactaggcttcctcagtcattgtatattttagcatatagGTAAATAGGTAAAGCTGCcaaagctgaacattatccaaaactccatttctcagacgATCGTCAATTTGGGAGCCtgcatgctaccactccttccttctcaaattccttgaaaaggctgtcgtttgcacaatttctcaaaacatgttgggtgaccctcccctcaataaagaataaacagacatgaccctcccctattttcctccggtggtccattccataaatactgaACAGTCCCtaagcatttttgttttttgggttggtgagtgaagcaaatctaccagccacttgcatattttaccagcatttggctaggaGATGGTGATCATTTTGAACCCTGGTAGTGACCATGGTGTTTAAACTTTAGAATCTACTCATCATTGTGGTCATAATTACATAATTACAAAAACTGAATCACATGAAAATAAATTGAGATATATCTTAATATAGTTTTAGGGAAATAACTACTGTGCATTGCATATTCTGATACACTATTCTGGGTCCGTATGTCAACAACTCTGCACTCTAGAAAAAAACTATTCAAATATGTTATTTAGTGTAAGTAATGAAATGCTTTAAACAGCTAAGCAATGATAGCATTTGGGTATCAAATGAAAAGCCTTAAAAATATAGCATTTGCAGAGTAAGTGTGTGTTAGCTTAAGAAAACGACCTGGTCATTTTAAAACTCATTAGTGACATGAATGGTGTTAATTTCATTCATTGCAATgccttaaaatgttttatttttttaatttgaagaaAGAGTGTATGGTATATGGATGATTATGAGATACATTTTGTGCAGAGTAGGGCTTAATAACAATCATTCAcaattttacatacagtattcaTTACATTTACAAACTCCACAAGAAAGACAAGCCTTTCATTTGTGCAGCATTTCCTCTGAATGTTCATTTTCAAACATCTAGCTGCAGTTTTTGCTTGTATGACCTCATACTCAGCTACTACAGTTTTCTTTATGAATGTATTGTGTATGATATGTTTGATAGATCATCTACGTACAGTACTGTTTatctctctgtattttttttgtgtaagtCCAACTGGGAAGGACAGTTTGTGTAACTGAAGAAGTgtgatgttggaaaaaaaattatatatatatatataaacaattaAATGTTGCTCACACTTGTATTTCCAATTCAATCCAAAAGCTGTGTTCATTGACATAGAATAAATCCCAAACCAACTCCCAGAATCCCGAACCCTGACAACAATTGACTCATAACGCTGCTATGTCTGATGTGTTAGCAAAAATGCCAACGTACtgtacacatccagcagacacaaaaCAGCAGTTTCCTCCCATTGGAGTTCTCACTggacttttaaaataaaatatctgggtcttaaatca

Function

NR:

description
cytochrome P450 4V2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K07427 CYP4V; docosahexaenoic acid omega-hydroxylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810220.1 True 3689 mRNA 0.43 11 34390148 34400994

Neighbor

gene id symbol gene type direction distance location
frg1 NA coding downstream 785016 33592642 ~ 33605132 (-)
asah1b asah1,LOC102779657 coding downstream 801107 33580853 ~ 33589041 (-)
sart1 sart1 coding downstream 838591 33548703 ~ 33551557 (-)
LOC120564990 LOC104967107,LOC102294790,LOC103370278 coding downstream 842765 33539583 ~ 33547383 (-)
casp3a LOC103370277 coding downstream 855092 33528419 ~ 33535056 (-)
tlr3 NA coding upstream 4058 34405052 ~ 34411361 (-)
npy2r NA coding upstream 115793 34516787 ~ 34521757 (-)
LOC120561135 lrat,LOC103357487,LOC103156491,LOC107094918 coding upstream 126059 34527053 ~ 34529098 (-)
LOC120557822 LOC104965748 coding upstream 155979 34556973 ~ 34560875 (-)
fam193a fam193a coding upstream 240210 34641204 ~ 34664220 (-)
G9732 NA non-coding downstream 24870 34365016 ~ 34365278 (-)
G9730 NA non-coding downstream 34822 34355008 ~ 34355326 (-)
G9695 NA non-coding downstream 60183 34329717 ~ 34329965 (-)
LOC120562219 LOC107384803,LOC107386814 non-coding downstream 119684 34264560 ~ 34270464 (-)
G9673 NA non-coding downstream 167041 34222887 ~ 34223107 (-)
G9745 NA non-coding upstream 61964 34462958 ~ 34468183 (-)
G9747 NA non-coding upstream 73178 34474172 ~ 34478450 (-)
G9770 NA non-coding upstream 129349 34530343 ~ 34532004 (-)
G9836 arfip1 non-coding upstream 279547 34680541 ~ 34685004 (-)
G9838 NA non-coding upstream 304864 34705858 ~ 34706062 (-)
stox2a stox2,LOC100702551,LOC102293991,LOC101478850,LOC102775740 other downstream 864633 33497102 ~ 33525515 (-)
tapt1b tapt1,LOC104934196,LOC102290950 other downstream 1025923 33306785 ~ 33364225 (-)
G9488 NA other downstream 1106068 33283078 ~ 33284080 (-)
G9418 fbxw7,LOC104948758 other downstream 1255228 33092460 ~ 33134920 (-)
lrba NA other downstream 1608994 32584724 ~ 32781154 (-)
G9740 NA other upstream 51856 34452850 ~ 34457635 (-)
G9997 NA other upstream 997646 35398640 ~ 35400474 (-)
rgs12b rgs12,LOC104946104 other upstream 1003821 35404815 ~ 35451211 (-)
LOC120572869 NA other upstream 1183476 35584470 ~ 35586613 (-)
micall1a LOC100693188 other upstream 1543054 35944048 ~ 35969266 (-)

Expression


Co-expression Network